Coturnix japonica (Japanese quail): 107313976
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Entry
107313976 CDS
T04297
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cjo00536
]
107313976 (SLIT2)
Glycosaminoglycan binding proteins [BR:
cjo00536
]
Heparan sulfate / Heparin
Axon guidance molecules
107313976 (SLIT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
LRRNT
Laminin_G_2
LRR_9
LRRCT
hEGF
LRR_1
DL-JAG_EGF-like
EGF_3
Motif
Other DBs
NCBI-GeneID:
107313976
NCBI-ProteinID:
XP_015718231
LinkDB
All DBs
Position
4:complement(67933321..68176031)
Genome browser
AA seq
1547 aa
AA seq
DB search
MMCAWGRLPLALGLLLLLAGEAAPQPCPAQCSCSGSTVDCHGLALRGVPRNIPRNTERLD
LNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLSEL
LFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLT
LNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPAH
LRGHNVAEVQKREFICSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTN
LPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYG
NKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS
PLRAIQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFR
CSAKEQYFIPGVHHFGCTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHI
PQYTAELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTS
NRLETVRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFD
TLHSLSTLNLLANPFNCNCHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFT
CDDGNDDNSCSPLSRCPAECTCLDTVVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPR
ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLS
LHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGE
MADKLLLTTPSKKFTCQGPVDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKG
QDCDIPIHACISNPCNHGGTCHLKEGEKDGFWCTCADGFEGENCEINVDDCEDNDCENNS
TCVDGINNYTCLCPPEYTAANLNEVEKGELCEEKLDFCAQNLNPCQHDSKCILTPKGYKC
DCTPGYVGEHCDIDFDDCQDNKCKNGAQCTDAVNGYTCICPEGYSGLFCEFSPPMVLPRT
SPCDNYECQNGAQCIVKESEPICQCLSGYQGEKCEKLISINFVNKESYLQIPSAKMHSQT
NITLQIATDEDSGILLYKGDKDHIAVELYRGRVRVSYDTGSYPASAIYSVETINDGNFHI
VELLAMDQILSLSIDGGSPKIITNLSKQSTLNFDSPLYVGGMPVKNNFAALRQSPGQNGT
SFHGCIRNLYINSELQDFRNVPLQVGILPGCEPCHKKVCVHGTCHATSQSSFSCECEGGW
TGPLCDQQTNDPCLGNKCVHGTCLPINAFSYSCKCLQGHGGVLCDEEEMLFNPCQSIRCK
HGKCRLSGLGKPYCECSSGYTGESCDKEISCRGERIRDYYQKQQGYAACQTTKKVSRLEC
KGGCSTGQCCGPLRSKRRKYSFECTDGSSFVDEIEKVVKCGCTNCLS
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgcctgggggaggctccccctggccctggggctgctgctgctgctggcgggc
gaggcggcgccgcagccgtgtccggcgcagtgctcctgctcgggaagcacggtggactgt
cacgggctggcgctgcgcggcgtcccgaggaacatcccccgcaacaccgagcggctggac
cttaatggaaataacatcaccagaatcaccaaaaccgactttgctggtctaaggcacctt
cgagttcttcagctcatggagaacaagattagcactattgagagaggagcgttccaggat
ttaaaagaactggagaggctgcgcctaaacagaaataacctccagttgctttctgaactg
ctctttctggggacgccgaagttatacaggcttgatctgagtgaaaatcagattcaagcc
atacccaggaaggcatttcgtggagcagtagatataaaaaatctgcaactggattacaac
cagatcagctgtattgaagatggggcatttagggctctacgcgacctggaagtgctcact
ctcaacaacaataacatcactcgactgtccgtcgcaagtttcaatcatatgcccaaactc
agaacttttcgcctgcactccaacaacctctactgcgactgccacctagcctggctgtca
gactggctgcggcagcgacctcgtgtaggcctctacactcagtgcatgggcccagcacac
ctgcggggccacaatgtggctgaagtccagaagcgggagttcatctgcagtgatgaggaa
gaaggccaccagtcattcatggctccatcctgcagtgtcttacattgtcccgctgcatgc
acctgcagtaacaacattgtggattgtcgtgggaaaggccttactgaaattccaacaaat
cttccagaaaccattactgaaatacggttagaacaaaattcaatcaaagtcatacctcct
ggagctttctcaccctataaaaagcttcgaagaattgacctgagcaataaccagatctct
gaagcagctccagatgctttccagggcttacgttctctgaattcacttgtcctctatggc
aataaaattactgaacttccaaaaggcctatttgaaggactattttctctgcaattgcta
ttattaaacgccaacaagatcaattgcctgcgagttgatgcgtttcaagatctgcacaac
ttgaatctcctatctttgtatgacaacaagcttcagaccattgcaaaaggcaccttttca
cctctacgtgcaattcagaccttgcatttggctcagaacccatttatctgtgactgccat
ctgaagtggctggcggattatcttcatacaaaccccattgagaccagtggtgcccgctgc
accagcccccgccgtctggcaaacaaaaggatcggccagatcaaaagcaagaaattccgc
tgctcagctaaagaacagtatttcattccaggagttcaccattttggctgcactgaagat
tacagatccaaattaagtggagactgctttgcagatttggcttgccctgagaaatgtcgc
tgtgaagggaccacagtggactgctccaatcagaaactcaacaaaattcctgatcacatt
ccacagtacacagcagagttgcgtctcaataacaatgaattttcagtcctggaagctaca
gggatctttaagaagcttcctcagctgagaaaaataaacctgagcaataacaagattaca
gatattgaagaaggtgcatttgatggagcctctggtgtcaatgaactattgctcactagc
aatcgtttggaaactgttagagacaaaatgttcaaaggactggaaagtcttaaaacactg
atgctgaggagcaaccgtgtgagctgtgtggggaacgacagcttcacaggcctgagctct
gtccgcctgctctcactgtatgacaaccagatcaccaccgtggcacctggctcctttgat
acccttcattcgctctctacattaaacctcttggccaatcccttcaactgcaactgccat
cttgcatggcttggagattggctgaggaagaaacgcattgtgacgggaaaccctcgctgt
cagaaaccttacttcctcaaagagattcctatccaggatgtggcaattcaggattttaca
tgtgatgatggaaatgatgacaatagctgctctccactgtcccgctgtcctgcagaatgt
acttgtctagacacagttgttcgctgcagcaacaaaggcctaaaagctttgcctaaaggc
atcccaaaagatgtaactgaactatatttggatggaaaccagtttactcttgttcctaga
gagctctccaactacaaacatctaacacttatagatttaagtaacaacagaatcagcact
ctttctaatcagagcttcagcaacatgactcagctgcttaccttaattcttagttacaac
cgcctgaggtgtatccctgcacggacatttgatgggttaaaatcacttaggttgctgtct
ttacatggcaatgatatttctgtggttcctgaaggagcctttaatgatctttcagcatta
tcgcacctggctattggggcaaatcctctttattgtgattgtaacatgcagtggctgtct
gactgggtaaaatcagaatacaaagaacctggtattgcacgatgtgctggccctggagaa
atggcagataaacttctactcacaactccatcaaaaaaatttacttgccaagggcccgtg
gatgtcaatattcttgctaagtgtaacccttgcttatcaaatccatgtaaaaatgatgga
acctgcaataatgatccagttgacttctacagatgcacttgcccatatggtttcaagggt
caagactgtgatattcccattcatgcctgcattagtaacccttgcaaccatggtggaact
tgtcatttgaaagaaggagaaaaagatggtttctggtgcacttgtgcagatggatttgaa
ggtgaaaactgtgaaataaatgttgatgactgtgaagacaatgactgtgaaaataattct
acttgtgtggatggaattaataattatacttgcctttgtccacctgaatatacagctgct
aatctgaatgaagtggaaaaaggtgagctctgtgaggagaaactagatttctgtgctcaa
aacttaaatccttgccaacatgactcaaagtgtatcttgacacccaaaggttacaaatgt
gactgcacacctggatatgtaggtgaacactgtgatattgactttgatgactgccaggac
aataaatgtaaaaatggagcacagtgtactgatgcagttaatgggtatacatgtatttgc
ccagagggatacagtggcttgttttgtgagttttcaccaccaatggttttaccacgcacc
agcccttgtgataactatgaatgccaaaatggagcacagtgtattgtaaaagagagcgaa
ccaatctgccagtgtttatcaggctaccagggtgagaaatgtgaaaagctgatcagtata
aactttgtcaacaaagaatcctatctacaaatcccttcagctaaaatgcactcccaaacc
aatatcacccttcagattgccacagatgaagacagtgggatcctgctctacaaaggcgat
aaggatcatatagcagtagagctgtaccgtggtagagtgagggtcagttatgacacagga
tcttatccagcctctgctatttacagtgtggaaactattaatgatggcaatttccacatt
gtggagctgctagctatggatcagattctgtctttgtccattgatggaggaagccccaag
ataattaccaatttgtccaagcagtctactttgaactttgattctccactgtatgttgga
ggcatgcctgtgaaaaataactttgcagctctacgccagtctccaggtcagaatggcaca
agctttcatggctgcatccgtaatctgtatatcaacagcgaactccaggacttcagaaat
gtgcctctgcaagtgggaattctgccgggttgtgagccttgtcacaagaaagtttgtgtg
catggaacatgccatgctaccagccagtcaagcttttcctgtgagtgtgaaggaggatgg
actggaccgctctgtgatcaacaaacaaatgacccgtgtcttggaaataaatgtgtgcat
ggtacctgcttgccgatcaatgcattttcatacagttgtaaatgcctgcagggacatggg
ggagtcctctgtgatgaagaggaaatgctgtttaacccctgccaatccatcaggtgtaaa
catggcaaatgcaggctttcaggacttgggaaaccatattgcgaatgcagcagcggatac
acgggggagagctgtgataaagaaatctcatgtcgaggggaacgaatccgagattactac
caaaagcagcaagggtatgctgcgtgccagacgaccaagaaggtatcgagactagaatgt
aaagggggatgttcaaccgggcagtgctgtggaccactaaggagcaagagacggaaatac
tcttttgaatgcactgatggttcgtcatttgtggacgagattgaaaaagtggtgaagtgt
ggctgtacaaattgtctctcctaa
DBGET
integrated database retrieval system
