Coturnix japonica (Japanese quail): 107318618
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Entry
107318618 CDS
T04297
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
107318618 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjo03036
]
107318618 (SIN3A)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
107318618 (SIN3A)
REST complex
107318618 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
107318618 (SIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
107318618
NCBI-ProteinID:
XP_015728157
LinkDB
All DBs
Position
10:complement(1961424..1986301)
Genome browser
AA seq
1288 aa
AA seq
DB search
MSQGFLVLPEHEFRMKRRLDEQESPVYTAQQRRITSSTDAFQHQHRVLAPAPPVYEAVSE
TMQSATGIQYSVTPSYQVSAVPQSSGSHGPALAAVHSGHHHAAPVQPHGSQVVQSHAHPA
PPAVPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVIS
RVSQLFKGHPDLIMGFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPQPQPQPQH
QSQPSAQSTPTPAQPAPQPPPAKISKPSQLQAHTPASQQTPPIPPYASPRSPPVQPHTPV
TISLGTTPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAG
GNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVESVRNDHGG
TVKKPQLNNKQQRPNQNGCQIRRHSGAGTTPPVKKKPKLLGLKDQSLAEASKHGVGTESL
FFEKVRKALRSTEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGYK
ESVHMETYPKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTW
VSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSA
EEQAKFRLDNTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEE
WREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQAS
EDNAGVPTGPHLSLAYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLF
AQRGELSDVEEEEEEEMDVDEATGAAKKHNGVGGSPPKTKLMFNNTTAQKLRGMDEVYNL
FYVNSNWYIFMRLHQILCLRLLRICTQAERQIEEETREREWEREVLGIKRDKSDSPAIQL
RLKEPMDIDVEDYYPAFLDMVRNLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIV
RQLQHIVSDEICVQVTDLYLSENNNGATGGLLASQSSRNLLEATYQRKAEQLMSEENCFK
LMFIQSRGQVQLTIELLDTEEENSDDPVEAERWSDYVERYVNSDSTSPELREHLAQKPVF
LPRNLRRIRKCQRGREQQEKEGKEGNSKKAMENVESLDKLECKFKLNSYKMVYVIKSEDY
MYRRTALLRAQQSHERVSKRLHQRFQAWVDKWTKEHVTREMAAETSKWLMGEGLEGLVPC
TTTCDTETLHFVSINKYRVKYGTIFKTP
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagggttttttagtgcttcccgagcatgagttcagaatgaagcggcgattggat
gagcaggagtcacccgtgtacacggcacagcagagacgtatcaccagcagcaccgacgcc
ttccagcaccagcaccgtgtgctcgccccggcaccaccggtgtatgaggcagtctcagag
accatgcagtctgccacggggatccaatactcggtaactcccagctaccaggtgtcagcc
gtgccacagagctcaggcagccacgggccagccctggcagcagtgcacagcggccaccac
cacgctgccccagtgcagccacatggaagccaggtggtgcagagccacgcacacccagcc
cccccggccgtgcctgtgcagggccagcaacagttccagaggctcaaggtggaagatgcg
ttgtcataccttgaccaggtgaagctgcagttcggcagtcagccacaggtctacaatgac
ttcttggatattatgaaggaattcaaatctcagagcattgacactccaggagtgatcagc
cgcgtatcgcagctcttcaagggccacccagacttgattatgggtttcaacaccttcttg
cctcctggctacaagattgaggtgcagacaaatgatatggtgaacgtgacgaccccgggg
caggttcaccagatccccactcatggcctgcagccccagccgcagccccagccccagcat
cagtcacaaccttcagcgcagtcgaccccaacaccagcacagccagcgccgcagccacca
cccgccaaaatcagcaagccatcacagctgcaggcgcacactcctgccagccagcagact
cccccaattccaccatacgcatccccacgctcaccaccggtgcagcctcacacacctgtg
acaatctctttgggaaccacaccgtccctgcagaacaatcagcctgtcgagtttaatcac
gccatcaactatgtcaacaagatcaagaaccgcttccaggggcaaccagacatctacaaa
gccttcctggagatcctccatacgtatcagaaagagcagcgcaatgccaaggaggcaggg
ggcaattacacaccagcactgacggagcaggaggtgtatgcgcaggtggctcgcctcttt
aagaaccaggaggatctgctctcagagtttgggcagtttctgccagatgccaacagctca
gtgctgttaagcaagacgactgcagagaaggtggagtcagtgagaaatgatcacggtggc
acagtaaagaagccacagctcaacaacaagcagcaaagacccaaccagaacggctgtcag
atccggcggcactcgggtgcggggacaacccctccagtgaagaagaaaccaaagctgctt
ggtttaaaagaccagtccttggcagaagccagcaagcatggtgtggggacagaatccctg
ttctttgagaaggtccgcaaagctctgcgaagcacagaagcatatgaaaacttccttcgc
tgcctggttattttcaaccaggaggtgatatcccgtgcagagctggtgcagctagtttcc
cctttcctggggaaatttcccgaactgttcacttggtttaaaaactttctgggctataag
gagtctgttcatatggagacgtatcccaaggaacgggcaactgaagggattgccatggag
atagactatgcctcctgtaaaaggctgggctccagctaccgcgccttgcccaagagctac
cagcagcccaagtgcacggggcggacgccactgtgtaaagaggttttgaatgacacctgg
gtctcattcccttcctggtctgaagactcaacttttgtcagctccaagaagacgcaatac
gaagagcacatctacaggtgtgaagatgagcgttttgagctggacgttgtcttggagacc
aacctggcaacgattcgcgtccttgaggccatccagaagaaactctcacgcttgtctgct
gaggagcaggccaagttccggctggacaacaccctgggaggcacctcggaggtgatccac
cgcaaggccctgcagaggatatatgcagacaaagcagccgacatcattgatgggctcagg
aagaacccatctgttgctgttcccatagtcctgaaaaggttaaagatgaaagaggaagag
tggcgagaagcccagagaggatttaataaagtctggcgagagcagaatgagaagtattat
ctgaagtcattggaccaccagggcatcaacttcaagcagaacgataccaaggtcctaagg
tcaaagagtctcctcaatgagattgaaagcatctatgatgagaggcaagagcaggcttca
gaagacaatgctggggttcccacaggcccacacctctcgttggcctatgaagacaagcag
atcctggaggatgctgcttccctcatcattcaccatgtgaagcggcagacaggaatccag
aaagaggacaagtacaaaatcaagcagatcatgtaccacttcattccagacctgctgttt
gctcagcgaggtgaactctcagatgtggaagaggaggaagaagaggaaatggacgtggac
gaagctactggagccgcaaaaaagcacaacggtgtggggggcagtcctcccaaaaccaag
ctgatgttcaacaacacgacagcccagaagctgcggggcatggatgaggtctacaacctc
ttctacgtgaacagcaactggtacatcttcatgcggctgcatcagatcctgtgcttgcgg
ctgctgcggatctgcacccaggctgagaggcagatcgaagaggagacaagggagagggaa
tgggagagggaagtgctgggcatcaagagagacaagagtgacagccctgccatccagctg
aggctgaaggagccaatggacatagacgtggaggattactacccggcattcctggacatg
gtgcgtaacctcctggatgggaacatggactcatcgcagtatgaggactccctgcgtgag
atgttcaccattcatgcctacattgccttcaccatggacaagctgatccagagcatcgtg
cggcagctccagcacatagtgagcgatgagatctgcgtgcaggtcacagacctctaccta
tcagagaacaacaacggggctacaggaggcctcctggcttcacagtcctctcggaacctt
ctggaggcaacgtaccagcgcaaagctgagcagctcatgtcggaggagaactgcttcaag
ctgatgttcatccagagcagaggccaagttcagttaaccattgaactgctggacacagag
gaggagaactctgatgaccctgtagaagcagagcgctggtcagactacgtggagcggtac
gtcaactccgactctacctcccctgagctccgggagcacctggcccagaaaccagtcttc
ctgcccaggaatctgaggcggatccgtaagtgtcagcgtggtcgggagcagcaggagaag
gaagggaaggagggaaacagtaagaaggccatggagaacgtggagagcttggacaagctg
gagtgtaaattcaaactgaactcctataagatggtgtacgtgatcaaatcggaggattac
atgtacaggaggactgctctgctgcgagctcagcagtcccatgaaagagtgagcaagcgg
ctgcaccagcggttccaggcctgggtggacaaatggaccaaggagcacgtcacccgtgag
atggcagccgagacgagcaagtggctaatgggcgaagggttggagggcttggtgccctgc
accaccacctgtgacacagagaccctgcactttgtgagcattaacaagtaccgcgtcaaa
tacggcacaatattcaagacaccataa
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