Coturnix japonica (Japanese quail): 107319608
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Entry
107319608 CDS
T04297
Symbol
USP4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cjo01002
]
107319608 (USP4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjo04121
]
107319608 (USP4)
Enzymes [BR:
cjo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107319608 (USP4)
Peptidases and inhibitors [BR:
cjo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107319608 (USP4)
Ubiquitin system [BR:
cjo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107319608 (USP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
Ubiquitin_3
UCH_1
USP7_C2
Choline_bind_1
USP7_ICP0_bdg
Motif
Other DBs
NCBI-GeneID:
107319608
NCBI-ProteinID:
XP_015730072
LinkDB
All DBs
Position
12:complement(1666389..1692780)
Genome browser
AA seq
964 aa
AA seq
DB search
MAAAQGGGGTVRPELGPEPADSATVEPAAVEAAAPSPEEQRAELRPLMAASMRLGESWYV
LTSRWFGLWKRYVGYDRWDVAGVGDPNLFPGPIDNSCLLGDGETQSLKEHLIAQLDYVLV
PSSAWQKLVSWYGCIEGQQPIVRKVMEFGLYAKHCEVEVYPLELKLCESSSPSNVISCCF
SRRDSVATLVKEVRKLFKIPAEKDVRLWSSHFDGSYEQLSELGVTLEDANIYHGELVLIE
VRNGDGTWPQHPFLAKSSTATGRNFTTSTKPSASSYSTASATSVITNGDSSNSYGLSSSS
LGRGGSGFACNSYSSNRDSASLSQPGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFLEDK
YEAEINHSNPLGMRGEIAEAYAELIKQIWSGRQSHVAPRMFKTQVGRFAPQFSGYQQQDS
QELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSVVAKEAWENHRLRNDSIIVDIFHGL
FKSTLVCPKCSKVSVTFDPFCYLTLPLPLKRDRLLEVTLVYADPQRRPVQYRVVVPMMGA
ISDLCDSLSKLSGVPAEKMVVTDVYNHRFHKIFQADEGLNHIMPKDDIFVYEVCKPSEDG
SEYITLSVYFREKAARQSSSTSGTVLFGQPLLVSVPKHKLTVDHLYGVVLERISRYVKLP
VAEVYSAPCPDRGACNGSSSVAEGDIEEMEHQDDGQEGREKLAEVDSCPSEGCMQVEPTR
GLQPCKKQYFTFSLVNLYGTSEINSIVEGKLLKLNAFSTLAIDWDSETRRLLFDEQEAQA
FEKHASVLQPQKMKAVVALKDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPK
ILVVHLKRFSYSRYWRDKLDTVVEFPIRGLNMSEFVCDPRGSSYVYDLIAVSNHYGAMGV
GHYTAYAKNKVNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQRRNEEHVAPSPPQEECDG
MDTN
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcccagggaggcggtgggacggtgcggcccgagctgggcccggagccggcg
gactcggcgaccgtggaaccggcggcggtggaagcggcggctccgagcccagaggagcag
cgggccgagctgaggccgctgatggccgcgtccatgaggctgggggagtcctggtacgtg
ctgaccagccgctggttcgggctctggaagcgctacgtggggtacgacaggtgggacgtg
gccggagtgggagaccccaacctcttccctgggcccatcgacaactcgtgtctgctcgga
gatggggagactcagagcttaaaggagcatctcatcgcacagctggactacgtgctggtg
cccagcagcgcctggcagaagttggtttcgtggtatggctgcatcgagggccagcagccc
atcgtgaggaaagtgatggaatttggtctatatgcgaagcactgtgaagttgaagtttat
cctcttgagctgaagctgtgtgagagcagcagtccttccaacgtgatcagctgctgcttc
agcagaagagacagtgttgccactctcgtgaaagaggtacggaaactctttaaaatcccg
gctgagaaggatgtgaggttatggagcagccattttgatggctcttacgagcagctcagc
gagctgggtgtcactctggaagatgcaaacatctatcatggggagcttgtcctaatagaa
gtgagaaatggagatggcacgtggcctcagcatcctttccttgcaaagtcaagcactgca
actggcagaaactttactacctctacgaaaccttcagcaagttcttattccacagcatct
gccacatctgtcattactaacggcgatagcagcaactcctatggactgagcagctccagc
ctgggcaggggaggttctgggtttgcctgcaactcttacagcagcaacagggactctgct
tccctgtcccaacctggcctatgtggactcagtaaccttgggaatacctgcttcatgaat
tctgcattacagtgtctgagtaatacccctcctctgaccgactatttcctggaagataaa
tatgaagctgaaataaatcacagcaaccccttggggatgagaggagaaattgcagaagcc
tatgcagaactcattaaacagatttggtctgggagacagtctcatgtggccccacgcatg
tttaaaacacaggttggccggtttgctcctcagttttcaggataccaacagcaagattcc
caggagctcttggcttttcttctagatggcttgcatgaggatttgaatagagtgaagaag
aaaccttacttggagctgaaggatgccaatggcaggcctgattcggttgtagcaaaagaa
gcctgggagaaccacagactgaggaatgattctatcattgtggatatttttcatggtctt
ttcaagtctacccttgtttgtcccaaatgctctaaggtttctgtgacctttgatcccttc
tgttacttaactcttccactgcctttgaagagagatcgtctgctggaggttaccctggta
tatgcagacccacagcgcagacctgtccagtaccgggttgtggtgccaatgatgggggcc
atctcagatctctgcgattcactctccaaactttctggggttcctgcagaaaaaatggtg
gtgacagatgtgtacaaccatcggttccacaaaatcttccaggcggatgaaggtttaaat
catatcatgccaaaagatgacatctttgtatatgaagtctgcaagccaagtgaagatggc
tcagagtacattactttgtctgtttactttcgggaaaaggcagcgaggcaatccagcagc
acttcagggactgtgctctttggtcaaccactgctggtatctgtgccaaaacacaagctc
actgtggatcacttgtacggtgtcgttttggagcggatcagtcgctatgtgaaactccct
gtggcagaagtatactccgcaccttgtccagacagaggagcatgcaatggctccagcagt
gtggctgaaggtgacattgaagagatggagcatcaggatgatggccaggaaggcagggag
aagctggcagaagttgattcctgcccctctgagggctgcatgcaggttgagccaacgaga
ggcctgcagccttgtaagaagcagtatttcactttcagccttgtgaatttatacgggacc
tctgagataaactctattgtagaaggaaaactcttgaaattgaatgctttttctacgctt
gctattgactgggattctgaaacacggaggctgctctttgatgaacaggaggcacaggca
tttgaaaagcatgcaagtgtgttacaaccacagaagatgaaggcagtggtagcccttaaa
gactgcatagagctctttactacaatggaaactctgggtgaacacgacccttggtattgc
cctaactgtaagaagcatcagcaggccacaaagaagtttgacttgtggtcactgcccaag
attttggtagtgcatctaaaacgcttctcatacagcagatactggagggataaacttgac
actgttgttgaattccctatcaggggtttaaacatgtctgagtttgtctgtgacccaaga
ggaagctcatatgtctacgacctcattgcagtttccaatcactatggagccatgggagta
ggccactacactgcctatgcaaagaacaaggtgaatggcaagtggtactactttgatgac
agcagcgtgtcgttggcttcagaagaccaaatagtgacaaaagctgcctatgtgctgttt
tatcagcgccgaaacgaggaacatgttgccccatctcctccccaagaagagtgtgacggc
atggataccaactaa
DBGET
integrated database retrieval system