Coturnix japonica (Japanese quail): 107323231
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Entry
107323231 CDS
T04297
Symbol
SOX18
Name
(RefSeq) transcription factor SOX-18
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjo03000
]
107323231 (SOX18)
Transcription factors [BR:
cjo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107323231 (SOX18)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
TDP43_N
HTH_24
Motif
Other DBs
NCBI-GeneID:
107323231
NCBI-ProteinID:
XP_015737585
UniProt:
A0A8C2SXN1
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All DBs
Position
20:8437367..8441970
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AA seq
418 aa
AA seq
DB search
MNISESNYCREEISQPRGDCSWVTGAVPAAEPGLAFSRPPGAASPSSRTPSPEPGFAFGP
AAPGAAPGAAPSRTPSPEPGYGYSPPTGRAEGKAGEDSRIRRPMNAFMVWAKDERKRLAQ
QNPDLHNAELSKMLGQSWKALSASDKRPFVEEAERLRVQHMQDHPNYKYRPRRKKQAKKI
KRMEPNILLHNLSQPCSDNFSMSHHGGSQPGHPQPPPLNHFRELHSMGSDIENYGLPTPE
MSPLDVLEQTEPAFFPPHMQEDCGMMPFRGYHHHHPQMEFPQEKCLGRDVAVPYAQPPAH
LADAMRTPHPSGLYYNQMCSGTQSGLSAHLGQLSPPPEAHHMESVDHLNQTDLWTDVDRN
EFDQYLNMSRTRPEASGLPYHVSLSKVTPRSISCEESSLISALSDASSAVYYSPCITG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaatatatctgagtcaaactactgccgagaggagatatcgcaaccccggggcgactgt
tcatgggtcaccggcgccgtgccggccgctgagcccgggctcgccttctctcggcccccg
ggagccgcctccccctccagccgcacgcccagccccgagcccggcttcgccttcggcccc
gcggcccccggggcggcccccggagcggcccccagccgcacccccagccccgagccgggc
tatggatacagccccccgacgggccgagccgaggggaaagcaggggaggattcccgcatc
cgccgccccatgaacgccttcatggtgtgggcgaaggacgagcgcaagcggctggcgcag
cagaacccggacctgcacaacgccgagctcagcaagatgctgggccaatcatggaaagcg
ctgagcgccagcgacaagcgtccctttgtggaagaggctgagcggctgcgggtccagcac
atgcaggatcaccccaactacaagtaccgcccgaggaggaagaagcaagccaagaaaatc
aagaggatggaacccaatatcctcctgcataacctttcccagccttgcagtgacaacttc
agcatgagtcaccatggcggcagccagccgggccacccccagcctcccccactcaaccac
ttcagagaactccactccatggggtcggatattgaaaactatggcttgccaactcccgag
atgtctcccttggatgtcttggaacagaccgagccggcgtttttccccccgcacatgcag
gaggactgcggcatgatgcccttccgtgggtaccaccaccaccacccccagatggagttt
ccccaggagaagtgcctgggccgggacgtggccgtgccctacgcgcagcccccagcacac
ttggccgatgccatgaggactccccacccctccggcctctactacaaccagatgtgctca
gggactcagagcgggctttccgcccacctgggccagctctcacccccacctgaagcccac
cacatggagagcgtggatcacttgaaccaaaccgacctttggacggacgttgaccgcaat
gagtttgaccaatatttgaacatgagcaggactcgtcccgaagcctcgggactgccttat
catgtctccctgtccaaagtgactcctaggagcatctcctgcgaggagagcagcttgata
tctgccctgtctgacgccagcagcgccgtctattacagcccatgcatcaccggctag
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