Coturnix japonica (Japanese quail): 107323511
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Entry
107323511 CDS
T04297
Symbol
AGRN
Name
(RefSeq) agrin isoform X4
KO
K06254
agrin
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04512
ECM-receptor interaction
cjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107323511 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107323511 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cjo00535
]
107323511 (AGRN)
Proteoglycans [BR:
cjo00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
107323511 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
Laminin_EGF
EGF
SEA
CFAI_KAZAL
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
107323511
NCBI-ProteinID:
XP_015738166
LinkDB
All DBs
Position
21:complement(2292854..2352891)
Genome browser
AA seq
2066 aa
AA seq
DB search
MGGSGAAATLALGLALGLALGGWANCPERELQRREEEANVVLTGTVEEIMNVDPVHHTYS
CKVRVWRYLKGKDIVTHEILLDGGNKVVIGGFGDPLICDNQVSTGDTRIFFVNPAPQYMW
PAHRNELMLNSSLMRITLRNLEEVEHCVEEHRKLLADKPNSYFTQTPPTPRDACRGMLCG
FGAVCERSPTDPSQASCVCKKTACPVVVAPVCGSDYSTYSNECELEKAQCNQQRRIKVIS
KGPCGSKDPCAEVTCSFGSTCVRSADGQTARCVCPASCSGVAESIVCGSDGKDYRSECDL
NKHACDKQENVFKKFDGACDPCKGILNDMNRVCRVNPRTRRVELLSRPENCPSKREPVCG
DDGVTYTSECVMGRTGAIRGLEIQKVRSGQCQHQDKCKDECKFNAVCLNRRGTARCSCDR
ITCDGAYRPVCARDSRTYSNDCERQKAECHQKAAIPVKHSGPCDLGTPSPCLSVECTFGA
TCVVKNQEPVCECQQVCQGRYDPVCGSDNRTYGNPCELNAMACVLKREIRVKHKGPCDRC
GKCQFGAICEAETGRCVCPTECVPSSQPVCGTDGNTYGSECELHVRACTQQKNILVAAQG
DCKSCGSTVCSFGSTCVGGQCVCPRCEQQPLAQVCGTDGLTYDNRCELRAASCQQQKSIE
VAKMGPCEDECGSGGSGSGDGSECEQDRCRHYGGWWDEDAEDDRCVCDFTCLAVPRSPVC
GSDDVTYANECELKKTRCEKRQDLYVTSQGACRALTTTPPPLPVVHCSQTIYGCCPDNMT
VALGVGAAGCPSTCQCNPYGSYGGACDPATGQCSCKPGVGGLKCDRCEPGFWNFRGIVTD
SKSGCTPCNCDPVGSVRDDCEQMTGLCSCKTGITGMKCNQCPNGSKMGMAGCEKDPSAPK
SCEEMSCEFGASCVEVNGFAHCECPSPLCSEANMTKVCGSDGVTYGDQCQLKTIACRQGQ
LITVKHMGQCHESITHTSHTMPPTPLPTLPLDKLIVPPPLQLTTRAPEPTELAATSLLIE
ASPTSRSHPTTRRVTTTRPATTPWMTHGVLKTTVRPLSTSPVVLATTQPAYAESGSAEGS
GDQEMSISGDQESSGAGSAGEEEVEESQVTPTPAIERATCYNTPLGCCSDGKTAAADAEG
SNCPATKVFQGVLILEEVEGQELFYTPEMADPKSELFGETARSIESALDELFRNSDVKKD
FKSIRVRDLGQSSAVRVIVESHFDPATSYTAADVQAALLKQIRASKKRTILVKKPQQEHV
KFMDFDWIPRLFTTTITTTTATTMAPATTRRHTTASAATTAHILHQDTLGHPSAKLAASG
STRRPTSTLPTTTTRRKPTRQPPSTTKKPSRPCDSHPCLHGGTCEDDGKEFTCSCPAGKG
GAVCEKPIRYFIPSFGGKSYLAFKMMKAYHTVRIAMEFRATELSGLLLYNGQNRGKDFIS
LALVGGFVELRFNTGSGTGVITSKVRVEPGKWHQLVVNRNRRSGMLAVDGEPHVSGESPT
GTDGLNLDTDLFVGGAPEDQMAVVAERTAATVGLKGCIRLLDVNNQMYDLREKGSDVLYG
SGVGECGNDPCHPNPCHHGGICHVKEAEMFHCECLHSYTGPTCADERNPCDPTPCHISAT
CLVLPEGGAMCACPMGREGEFCERVVEQDHTMPFLPEFNGFSYLELNGLQTFVPDLQDKM
SMEVVFLAKSPSGMIFYNGQKTDGKGDFVSLALHDGYLEYRYDLGKGAAVLRSKEPVPLN
TWISVLLERSGRKGIMRINNGERVMGESPKSRKVPHAFLNLKEPFYVGGAPDFSKLARAA
AISTSFNGAVQRISIKGVPLLKEQHIRSAVEISPFRAHPCTQKPNPCQNGGTCSPRMESY
ECACQRGFSGAHCEKVIIEKAAGDAEAIAFDGRTYMEYHNAVTKSEKALQSNHFELSIKT
EATQGLILWSGKGLERSDYIALAIVDGFVQMMYDLGSKPVILRSTVPINTNHWTHIKAYR
VQREGSLQVGNEAPITGSSPLGATQLDTDGALWLGGMERLSVAHKLPKAYSTGFIGCIRD
VIVDRQELHLVEDALNNPTILHCSAK
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgggggggtcgggggcggccgcgaccctggcgttgggtttagcgctggggttggctctg
ggagggtgggcgaactgccccgaacgggagctgcaacgtcgggaggaggaggccaacgtg
gtgctcaccggaacggtagaggagatcatgaacgtggaccccgtgcaccacacctactcg
tgcaaggtgagagtatggcgttacctgaagggcaaagacatcgtcacccacgagatcctc
ttggatggtgggaacaaagtggtcatcggtggcttcggggaccccttaatctgtgacaac
caagtgtctactggggacacacggatattctttgtcaaccctgcccctcagtacatgtgg
cctgcccaccgcaacgagctgatgctcaactccagcctgatgcggatcacgctgcgtaac
ctggaggaggtggagcactgcgtggaagaacataggaagcttcttgctgacaagcccaat
agttattttacccagaccccgccgacccctcgagatgcctgccgagggatgctgtgtggg
ttcggggcggtgtgtgagcgcagccccaccgacccctctcaagcctcctgtgtctgcaag
aagacagcttgccctgtggtggtggctcctgtctgcggctccgactattccacctacagc
aacgagtgtgagctggagaaagcccagtgcaaccagcagaggcggatcaaggtcatcagc
aagggaccatgcggctccaaggacccctgtgcagaggtgacatgcagctttggcagcacg
tgtgtccgttctgcagacggccagacagccaggtgtgtttgccctgcatcctgcagcggt
gtggctgagagcatcgtctgcggcagtgatggcaaggattaccgcagtgagtgtgacctc
aacaaacacgcctgtgacaagcaggagaacgtcttcaagaagtttgatggagcctgcgac
ccctgtaagggcatcctcaatgacatgaaccgtgtgtgcagggtgaacccccgcacccgc
cgcgtggagctgctctcccgccccgagaactgcccctctaagcgggagccggtgtgtggt
gacgatggggtgacatacaccagtgagtgtgtaatggggcgcacaggggccatccgaggg
ctggagatccagaaggttcgctctgggcagtgccagcaccaagataaatgcaaggatgaa
tgcaagttcaatgctgtctgcctgaaccgccgtggtacagcacgttgctcctgcgaccgc
atcacttgtgatggcgcctaccggcctgtctgcgcccgcgacagccgcacctacagcaac
gactgcgagaggcagaaagctgagtgccaccagaaagctgccatcccagtaaagcacagt
ggaccctgtgacctgggtacccccagcccctgcctgagcgtggaatgcacttttggggcc
acctgcgtggtgaagaaccaggagcccgtgtgtgaatgccagcaggtttgccagggccgc
tatgaccccgtctgcggcagcgacaaccgcacctatggcaacccctgcgagctcaacgcc
atggcctgcgtcctcaagagagagatcagggtgaagcacaaggggccgtgcgaccgttgt
ggcaagtgccagtttggggccatctgtgaggcggagacggggaggtgcgtgtgccccacg
gagtgtgtgccctcctcccaacccgtctgtggcacagatggcaacacctacggcagcgag
tgtgagctccatgtccgagcgtgtacgcagcagaagaacattttggtggctgcccaaggc
gactgcaagtcctgcggcagcaccgtgtgttcctttggcagcacatgtgtgggtgggcag
tgtgtgtgtccccgctgtgagcagcagcccctggcccaggtttgtggcactgatggcctc
acctatgacaaccgctgtgagctccgagcagcctcctgccagcagcagaagagcatcgag
gtggccaagatggggccgtgtgaggacgaatgtggctcaggaggttcaggctctggtgat
gggagtgagtgtgagcaggaccggtgccggcactacgggggttggtgggatgaggatgca
gaagatgaccgttgtgtgtgtgacttcacctgcctggcagtgccacgcagcccggtctgt
ggctctgatgatgtgacctatgccaatgagtgtgagctgaagaagacaaggtgtgaaaaa
cgccaggatctctatgtcaccagccaaggagcctgccgtgccctcaccacgaccccaccg
cctctcccagttgtgcactgcagtcaaaccatctatgggtgctgcccagacaacatgacc
gtggcgctcggagtgggtgcagctggatgcccaagcacctgccaatgcaacccctatggc
tcctatggaggagcttgcgaccctgctacggggcaatgctcctgcaaaccaggtgttggg
gggctcaaatgtgaccgatgtgagcctggattctggaacttccgtggcatcgtcaccgac
agcaagagcggctgcacaccctgtaactgtgacccagtgggctcagtgcgcgatgactgc
gagcagatgactgggctctgctcctgcaagactggtatcactggcatgaagtgcaaccag
tgtcccaatggcagcaagatgggcatggctggctgtgaaaaagacccatcagctccaaaa
tcctgtgaggaaatgagctgcgagttcggggcctcgtgtgtggaggtcaacggctttgcc
cactgcgaatgcccgtccccactctgctcagaggccaacatgaccaaggtgtgtggctct
gatggtgttacctatggggaccagtgccagctgaagactattgcctgccgacagggacag
ctcatcacagtgaagcacatggggcagtgccacgagtccatcactcacacaagccatacg
atgccacccacccctctgcccactttgcctttggacaagctcatcgtacccccaccgctg
cagctgaccacccgggctccagagcccactgagctggctgccacctccctgctgatagaa
gccagccccacttcaagaagtcaccctacaacaaggcgagtcacgacgaccagacctgcc
accacaccatggatgacccatggagtgctgaagaccaccgtccgcccgctctccacctct
cctgtggtcctggctactactcagcctgcctatgctgaatcaggcagtgcagaaggcagt
ggggaccaggagatgagcatcagtggggaccaggaatccagtggggcaggctctgctggg
gaagaggaggtggaggaaagccaggtaaccccaactccagccattgagagggcaacgtgc
tacaacaccccgctcgggtgctgctctgatggcaagactgcggctgctgatgcagaaggg
agcaactgtccggctaccaaagtcttccaaggagtcctcatcttggaggaggtggaaggc
caggagctgttctacacacctgagatggctgaccccaaatcagagctcttcggggagacg
gccaggagcatcgagagcgcattggatgagcttttccggaattctgatgttaagaaggat
ttcaagagcatccgtgtccgagatctggggcagagcagcgctgtccgtgtcattgtagag
tcccactttgacccagccacttcctacacagcagctgatgtccaggcggccctgctgaag
cagatcagagcctccaagaagaggaccatcctggtgaagaagccccaacaggagcatgtc
aaattcatggactttgactggatccccaggctcttcaccaccaccatcaccaccaccaca
gccaccaccatggcacctgccaccactcggaggcacaccacggcttctgctgccaccaca
gcccacatcctgcaccaggacactttgggccaccccagtgccaagctggcagcatctgga
agcaccaggaggccaacatccaccctgcctaccaccaccacccggcgcaagcccactcgc
cagccccccagcaccaccaagaagccttcgcgaccttgcgactcacatccctgcctgcac
ggtggcacctgtgaagatgatggcaaagagttcacctgcagctgcccagcgggcaaagga
ggggctgtgtgtgagaaacccatcaggtacttcatccccagcttcggtggcaagtcctac
ctggccttcaagatgatgaaggcgtatcacaccgtgcgcatcgccatggagttcagagcc
acggagctcagtgggctgctgctctacaacgggcagaaccgtggcaaggacttcatctcc
ctggcgctggtgggcggcttcgtggagctcaggtttaacacaggctccggcacaggcgtc
atcaccagcaaggtgcgcgtggagcctggcaagtggcaccagctggtggtgaaccgcaac
cgccgcagcggcatgctggctgtggatggggagccccacgtcagtggggagagccccaca
ggcaccgatgggctcaaccttgacaccgacctctttgttggaggagctcccgaggaccaa
atggctgtggtggcagagcgtactgcagctacggttggcttgaagggctgcatccgcctc
ctggatgtgaacaaccagatgtatgacctgagggagaaaggcagtgatgtgctgtatggc
agtggggtgggagagtgtggcaatgacccctgccaccccaacccctgccaccatgggggc
atctgccacgtcaaggaggctgagatgttccactgcgagtgtctccactcctataccggt
ccaacatgtgctgatgagagaaacccatgcgacccgacaccgtgccacatctctgccacc
tgcctggtgctgccggagggaggtgccatgtgtgcctgtcccatgggacgggaaggagag
ttctgtgagcgagtggtggaacaggaccacaccatgcccttcctcccagagttcaatggc
ttttcctacctggaactgaacgggcttcagacctttgttcctgacctgcaggacaaaatg
tccatggaagtggtgttcctggccaagagtcccagcggcatgatcttctacaatgggcag
aagacggatggcaaaggagactttgtgtctctggctttgcacgatggctacctggaatat
cgatatgacctgggcaaaggggcagccgtgctcaggagcaaagagccagttcccctcaac
acctggataagcgttttgttggagaggagtgggcgcaaagggataatgaggatcaacaat
ggagagagggtgatgggagagtcaccgaaatcccgtaaggtgcctcacgccttcctgaac
ctgaaggagccattctatgttgggggagcccctgatttcagcaagctggctcgagctgca
gccatctccaccagcttcaatggagctgtgcagaggatctccatcaaaggagttcccttg
ctgaaggagcagcacatccgcagcgctgttgaaatctcccccttccgtgcccatccctgc
acccaaaagcccaacccatgccagaacggaggtacctgcagcccccggatggagagctat
gagtgtgcctgccagaggggcttctctggggctcattgtgagaaagtgatcattgagaag
gcagctggagatgcagaggccattgcatttgatggcaggacgtacatggagtaccacaat
gctgtgacaaagagcgagaaggctttgcaatccaaccacttcgagctgagcatcaaaaca
gaagccacccagggcctgatcctgtggagtgggaaggggctggagcgatctgactacatc
gcccttgccatcgtggatggcttcgtccagatgatgtatgacctgggctccaagccagtc
atcctccggtccacagtccccatcaacaccaaccactggacccacatcaaagcatacagg
gtacagagagaaggatccctgcaggtcggcaatgaagctcccatcactggttcctcaccg
ctgggtgccacacagctggacacggatggggccctgtggctggggggaatggagaggctc
agcgtggctcacaagctgcccaaggcctacagcactggctttattggctgcataagggac
gtgattgtcgaccgccaagaactgcatctggtggaggacgctttaaacaaccccacgata
ttacactgctcagccaaatag
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