Comamonas kerstersii: B5M06_05130
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Entry
B5M06_05130 CDS
T04758
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cke
Comamonas kerstersii
Pathway
cke03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B5M06_05130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cke03400
]
B5M06_05130
Enzymes [BR:
cke01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
B5M06_05130
DNA repair and recombination proteins [BR:
cke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
B5M06_05130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AQZ97740
UniProt:
A0A1V0BCX1
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All DBs
Position
1086438..1087250
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AA seq
270 aa
AA seq
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MDASLFKLTSLNLNGIRSAASKGVEDWIAATGPDCICVQEVKAQAADIAGKFDSLAGMPG
VFHFAQKRGYSGVGIYSRHEPSDVIAGFDPEEFDAEGRYVEARFDTPTRKFSIISSYFPS
GSSGEDRQAAKFRFLAKMHAHLMRLKGEREFVLCGDINIAHRKEDLKNWRSNQKNSGFTP
EERAWMDMLLADNENGGIKDVYRCLKPDTTDECYTWWSNRGQAYANNVGWRLDYHLATPA
IAALAREESIYKGEKFSDHAPMTVGYEMKL
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttcccttttcaaattgaccagcctcaacctcaacggcattcgttctgccgct
tccaagggtgtggaggactggatcgctgcgaccggcccggattgtatttgcgtgcaagag
gtcaaggcccaagctgcggatatcgccggcaagtttgactccctggcaggcatgcccggc
gtcttccattttgcgcaaaagcgcggctactcgggcgtgggcatctacagccgccacgag
cccagcgatgtgattgcaggctttgaccctgaagagttcgatgccgaaggacgatacgtg
gaggcgcgctttgatacgcccacccgcaagttctccatcatcagcagctactttcccagc
ggctcctccggcgaagaccgccaggccgccaagttccgctttctggccaagatgcacgcc
cacttgatgcgcctgaaaggcgaacgcgagtttgtgctgtgcggtgacatcaacattgcc
caccgcaaggaagacctgaaaaactggcgcagcaaccagaagaacagcggcttcaccccc
gaagaacgcgcctggatggacatgctgctggccgataacgaaaacggaggcatcaaggat
gtctaccgctgcctcaagcccgacaccacggacgagtgctacacatggtggagcaaccgc
ggccaggcctatgcaaacaacgtgggctggcgcctggactaccacctcgccaccccagcc
atcgctgccctggcacgggaggagtccatctacaagggcgagaagttctcagaccatgcg
ccgatgacggtggggtatgagatgaagctgtaa
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