KEGG   Comamonas kerstersii: B5M06_15555Help
Entry
B5M06_15555       CDS       T04758                                 

Definition
(GenBank) DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cke  Comamonas kerstersii
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:cke00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    B5M06_15555
   03410 Base excision repair
    B5M06_15555
   03420 Nucleotide excision repair
    B5M06_15555
   03430 Mismatch repair
    B5M06_15555
Enzymes [BR:cke01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     B5M06_15555
    6.5.1.6  DNA ligase (ATP or NAD+)
     B5M06_15555
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     B5M06_15555
DNA replication proteins [BR:cke03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    B5M06_15555
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     B5M06_15555
DNA repair and recombination proteins [BR:cke03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     B5M06_15555
   NER (nucleotide excision repair)
    Other NER factors
     B5M06_15555
   MMR (mismatch exicision repair)
    Other MMR factors
     B5M06_15555
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
3318561..3319421
Genome map
AA seq 286 aa AA seqDB search
MHRRCFISQMLYWMAGWMLSAQLAYSTPLTLATPYHPNLNLAHYWVSEKYDGIRAYWNGQ
QFLSRQGLPIEAPAWFTAGWPAYALDGELWAGRGQFAKVQSTVAQGSKDETGWQQLRYMV
FDLPQHSGGFTQRYQALQQLVQGIAQPWVQAAPQWQVPDHATLMQQLRQFSQQGAEGLML
RHQHAPYRVGRSDDLIKLKLFDDAEAVVIGHLPGKGKYTGMTGALLVQTPEGLRFRIGSG
LKDADRANPPPIGSTITYRYNGTHPSGVPRFARFWRVREEATSPTK
NT seq 861 nt NT seq  +upstreamnt  +downstreamnt
atgcacaggcggtgctttatctctcagatgctctactggatggcaggctggatgctgtca
gcgcaacttgcgtacagcactccactcaccctcgccaccccctaccaccccaacctgaac
ctggcgcactactgggtcagcgaaaaatacgatggcattcgcgcctactggaacggccag
cagttcctcagccgccagggcctgccgattgaagcccctgcctggttcacggcaggctgg
cctgcctacgccctggacggtgagctgtgggccgggcgcgggcagtttgccaaagtgcag
tccacggtggcacaaggcagcaaagatgaaacaggttggcagcagctgcgctacatggtg
tttgacctgccgcagcacagcggaggcttcacccagcgctaccaggcgctgcagcagctg
gtacaaggcatcgcgcagccctgggtgcaggctgcgccgcaatggcaagtgccggaccac
gccacactgatgcagcagttgcgccagttcagccagcaaggcgcggaaggcttgatgctg
cgccaccagcacgcgccctatcgcgttgggcgcagtgatgacctgatcaaactcaagctg
tttgatgacgcagaagccgtggtcattggccacctgcccggcaaaggtaaatacacgggc
atgacaggcgcgctgctggtgcagacgcccgagggcctgcgctttcgcattggcagtggg
ctcaaggatgcagaccgtgccaacccgcccccgattggcagcaccatcacttatcgctac
aacggcacgcatcccagtggggtgccacgctttgcacggttctggcgtgtgcgagaagag
gccacttcacccaccaaataa

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