Caldicellulosiruptor acetigenus I77R1B: Calkr_0238
Help
Entry
Calkr_0238 CDS
T01356
Name
(GenBank) SpoIID/LytB domain protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
cki
Caldicellulosiruptor acetigenus I77R1B
Brite
KEGG Orthology (KO) [BR:
cki00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cki01011
]
Calkr_0238
Enzymes [BR:
cki01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Calkr_0238
Peptidoglycan biosynthesis and degradation proteins [BR:
cki01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Calkr_0238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
SPOR
Motif
Other DBs
NCBI-ProteinID:
ADQ39803
UniProt:
E4S728
LinkDB
All DBs
Position
275778..277520
Genome browser
AA seq
580 aa
AA seq
DB search
MAKKLLCGVLTAIFFIVFSSINILPTFSQTQIPEWIRIGVFYADGYKKSSPVDSVKIEAK
EKLFLAISDDKNFITIADTQKNSLTVSKDVYKKNGQEGPNYHVAVGRYISYKTAENSLKS
FSSFKDAFVGFVNGGYSILIGCFDNINDAKKLAAKLSGATIYSSEMMVLVKDESGKVIFG
FDGKSTRFLMLIPQKQNGVERIKIGDRWFRGRAEFKRIKGSDMTVINVTKLEEYLYGVIR
MEIDPLWPMEAVKAFAVIARTYAVRNLGKHQSIGFDLCPTDHCQVYGGAVDGTYGEKQAI
AAVDSTRGEIITYKGNPIDAVYFSSTGGIPTEDSENVWRYPVEYLRSVDNSKEAKNSKSS
WLFQFTKDEIKSMLKKRNIDIGDILDIQALEYTKAGRVLRLKIVGTQGEYECQKEATRLL
FGLYSQAYTIATDADVAVVDSNGKVKKVRISSQKILFEDGSVKRAVVAGQAQNFEETEKL
LQQTAESVYLSTYDEVYQSENVGGFDGNQKTYSQQYIYVVNPDGSIDKVPLIPTTYTFNG
KGWGHGVGMSQWGAKGLAESGYNYKQIIKHYYTGVEIEKR
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaacttttgtgcggggtgttaacagctatcttttttatagttttttcttca
attaatatattacccacattttcacaaactcaaattccagagtggataagaataggtgtg
ttttatgctgatggttacaaaaaatcaagtccggtggattctgtaaaaattgaggcaaaa
gaaaagctttttttggctatttctgatgacaaaaactttattacgattgcggatacacaa
aaaaatagtcttacagtttcaaaggatgtgtacaaaaagaatggtcaagaaggaccaaat
tatcatgtggcagttgggaggtatatttcatacaaaacagcagagaatagcttgaaaagt
ttttcttcattcaaagatgcctttgttggctttgtaaatggtggatatagcatattaatt
ggctgctttgacaatataaatgatgcaaaaaagctggcggcaaaactttctggtgcaacc
atttattcttcggagatgatggtgcttgtaaaagatgagagtggcaaagttatttttgga
tttgacggaaagagtacaaggtttttgatgttaattccgcaaaagcaaaatggggttgag
agaataaagataggtgacagatggttcaggggaagggctgagtttaaaagaataaaaggt
agtgatatgacagttataaatgttacaaagcttgaagagtatctgtatggcgttatcagg
atggagattgacccgctgtggccaatggaagctgtaaaggcgtttgctgttattgcccga
acgtatgctgtgaggaaccttggcaagcaccaatcaattgggtttgacctgtgcccgaca
gaccactgtcaggtatatggtggtgcggtcgatggcacatatggtgaaaagcaagcaatt
gcagctgttgactcaacaagaggtgagattataacatacaaaggcaacccgattgacgct
gtgtatttttcgtcaacaggcggtattcccacagaggattctgaaaatgtctggaggtac
cctgttgagtatttgaggtctgttgacaactctaaagaagcaaaaaattcaaagtcgtcg
tggttatttcagtttaccaaagacgaaataaaaagtatgctcaaaaaaagaaacatagac
attggcgatattttggatattcaagctcttgagtacacaaaagcgggaagggttttgagg
ctaaaaattgtgggcacgcaaggcgagtatgagtgccaaaaagaagcaacacgccttttg
tttggcctttacagccaggcatatacaattgcaacagatgcagatgtagctgtggtagat
agcaatgggaaggtgaaaaaggtaagaataagcagccagaagattttgttcgaggatggg
agtgtaaaaagagcggtggttgctgggcaggcgcaaaattttgaagaaactgagaagctt
ttgcaacaaactgctgaaagtgtgtatctttcgacatatgatgaggtgtaccagtctgag
aatgttggaggttttgatggtaaccagaagacatattcccagcagtatatatatgtagta
aatccggatggcagcattgacaaggtgccacttattcctactacttacacattcaatggc
aagggctggggacacggcgttggaatgagccagtggggtgcaaaaggccttgctgaaagt
ggttataattataagcagattatcaaacactattacacaggagttgagattgaaaaaaga
tga
DBGET
integrated database retrieval system
