Corynebacterium kroppenstedtii: ckrop_0471
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Entry
ckrop_0471 CDS
T00896
Name
(GenBank) putative ATP-dependent DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ckp
Corynebacterium kroppenstedtii
Pathway
ckp03420
Nucleotide excision repair
ckp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ckp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ckrop_0471
03430 Mismatch repair
ckrop_0471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ckp03400
]
ckrop_0471
Enzymes [BR:
ckp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ckrop_0471
DNA repair and recombination proteins [BR:
ckp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ckrop_0471
MMR (mismatch excision repair)
Other MMR factors
ckrop_0471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACR17247
UniProt:
C4LHE2
LinkDB
All DBs
Position
572464..575076
Genome browser
AA seq
870 aa
AA seq
DB search
MNDSLSTRLPDGGPLTPQQLLEGLNPQQRQAVEHEGSPLLVVAGAGSGKTAVLTRRIAYL
IGVRGVAPWNIVAITFTNKAATEMKERVADLIGPIAERMWVSTFHSMCVRILRAQANLIP
GLNTNFTIYDSDDSRRLLTMIARDMNLDLKRFASRTVASAISNLKNELRTPDEALADAEE
DKNPFNETVAQIFAEYQKRLRASNAVDFDDLIGEVVRIFREYPEVALYYRRRFRHVLVDE
YQDTNHAQYVLVSTLVGDEGSEGDSIPPSELCVVGDADQSIYAFRGATIRNIEEFERDYP
HAETILLEQNYRSTQTILSAANAVISQNSGRREKNLWTALGEGERIVGYVADNEHDEARF
VAREIDQLVDNSTINYGDIAVFYRTNNASRALEDIFIRNGLPYKVVGGTRFYERKEIRDI
IAYLKVLDNPDDSVSLRRIINTPRRGIGNRALSLLSLYAADHGVSMGAALRAAADGDIPA
LGSRGNKAVGRFVEMMDGLREDTADNQLVSHDGDDLGIPDLGAIVNDVIERSGYLESLEG
SNDPQDGARLDNLRELVSVAREFASEAAHQLAYERMPSATASESAPGAGAEDGSSVGSDG
VDSSGTDSGGGIDTAGDEAFLEEGEPQPGSLQAFLERVSLVSDADQIPDEENGVITLMTL
HTAKGLEFPVVFLTGWEDGQFPHMRALGDPSELSEERRLAYVGITRAQRRLYISRAVTRG
SWGQPVNNPASRFIAEIPEDLIHWEREEPQQSWDSGDWSLGWPDKSTSGYRRGNARYRGS
QYGGAGSSAHGSGGRRGAGRGVGSSSDRRSGTPASALHLEVGDQVNHDKYGLGTVESVSG
LGKHTSVVIDFGKEGTVRLMLIGNVPMEKL
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatagcctttccactcgcttgccggatggtgggccattgactccacagcagcta
ttggaaggacttaatccgcagcagcggcaggcggtcgagcacgagggttctccgttgctt
gttgtcgcgggggctggttcggggaagaccgcggttctgacccgccggattgcttacctc
attggtgttcgtggggtagcgccgtggaatatcgtcgctatcacctttactaataaagcg
gcgacggaaatgaaggaacgcgttgctgaccttattgggccgattgcggaacgtatgtgg
gtctctacgttccactccatgtgcgtccgtattcttcgtgcgcaagccaatcttattccg
ggtttgaacactaacttcactatttatgacagtgatgattcgcggcgtctgctcacgatg
atcgcgcgcgatatgaatttggacctgaagcgttttgcgtcgcggacggtagcgtcggcg
atttcaaatcttaagaatgaattacgcactcccgacgaagcgcttgccgacgccgaagaa
gataagaatccttttaatgaaaccgtggcgcagatcttcgctgagtatcagaagcgtctg
cgtgcatcgaatgctgttgattttgatgatctaatcggcgaagttgttcgtattttccgt
gagtatccggaagtggccctttattaccgacgacggttccgtcatgtgttggtggacgag
taccaggatacgaaccatgctcagtatgtgttggtctcgacgttagtgggggacgagggc
tctgagggggactctattccgccgagcgagttatgtgtcgtaggtgatgctgaccagtca
atttatgctttccgtggggctacgattcgcaacattgaagagttcgagcgcgattatccc
cacgcagaaacaattttgttagagcagaattaccgttccacccaaacgattctttctgct
gctaacgctgtgatttcccaaaactctggacgtcgtgagaagaatctgtggacggcgttg
ggggagggtgaacgaattgttggatatgtggccgacaatgagcatgatgaagcccgattt
gtggcgcgtgaaattgatcaattagttgacaactccaccattaattatggcgatatcgcg
gttttctaccgaaccaataatgcgtcccgggcgttggaagatatctttattcgcaatggt
cttccgtacaaggtggtcggtggaacgcgattttatgagcgcaaagaaatccgagacatc
attgcttatctgaaagttctggataatccggatgattcggtcagcttgcgacggataata
aacactccgcggcgaggaatcggtaaccgtgctctgtctttgctctctctgtacgcggca
gatcacggcgtcagtatgggtgccgcattgcgggccgctgccgatggggacattccagcg
ttaggctcgcgcggtaataaagcggtggggcgttttgtcgagatgatggacggattgcgc
gaagataccgccgataaccagctggtatcccatgacggggatgacttgggcattcccgat
ttgggcgcgattgttaacgacgtgattgaacgaagcggttatctggaaagcctggaggga
tcgaacgatccgcaggatggggcccgcctggataacctccgtgagcttgtctctgtggcg
cgtgagttcgcctctgaagctgcacatcagttggcttatgaacgtatgcctagcgctacc
gcatcggagagtgccccgggtgctggcgcggaggatggttccagcgtcggcagtgatggc
gtcgatagcagcggcaccgatagcggcggaggaatagatactgcaggtgacgaagcattt
cttgaagaaggtgaacctcagccggggagtttgcaggcgttcttggagcgtgtttcctta
gtgtccgatgcggatcagattcctgatgaagaaaacggcgtgatcactctcatgacgctc
cacacggcaaaggggcttgaattcccggtcgtgttcctcactggttgggaggacgggcag
ttcccgcacatgagggcgctgggtgatccgtcggagctgtcagaggaacggcgattggcc
tatgtgggtattacgcgtgcgcagcgtcggttgtatatttctcgggctgtgaccagggga
tcctgggggcaaccggtgaataatcctgcatctaggtttattgcggagattccggaggat
ctcattcattgggaacgcgaagaacctcagcaaagctgggatagcggcgactggtcactg
ggatggccagacaagtcgacttccgggtatcgacgggggaacgctcggtatcgtggctct
caatatggtggcgctgggtcgtcggctcatggttccggtggccgacgaggtgctggtcgt
ggagtcggttcgtcctcggatcgccgttcgggtacgcctgcgtcggcgcttcatctcgag
gtcggcgaccaagtcaatcacgataaatatgggttgggaactgtggaatcagtctcaggc
cttggcaagcacaccagcgtggtgatcgattttgggaaggaaggcaccgtccgcctcatg
ctgatcggcaacgttcccatggaaaagctgtaa
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