Clostridium kluyveri NBRC 12016: CKR_2584
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Entry
CKR_2584 CDS
T00832
Name
(GenBank) hypothetical protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ckr
Clostridium kluyveri NBRC 12016
Pathway
ckr00470
D-Amino acid metabolism
ckr00550
Peptidoglycan biosynthesis
ckr01100
Metabolic pathways
ckr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ckr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CKR_2584
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CKR_2584
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CKR_2584
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ckr01011
]
CKR_2584
Enzymes [BR:
ckr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CKR_2584
Peptidoglycan biosynthesis and degradation proteins [BR:
ckr01011
]
Precursor biosynthesis
Amino acid ligase
CKR_2584
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
RimK
GARS_A
ATP-grasp
CPSase_L_D2
ATPgrasp_ST
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
BAH07635
UniProt:
B9E560
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All DBs
Position
2906464..2907357
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AA seq
297 aa
AA seq
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MKVGIIMGGISSEREVSLNSGKSIINYMDKNKYEIVPIVIDKKNDVFEKVKDIDFAFIAL
HGKFGEDGIIQSVFQTMDIPYSGCSPLTSGICMDKDISKKLLYSANINTAEWICIKSIEN
IDYDYLEKMGYPVVVKPNSGGSSVATTIIEKSEDIEEAARLAFNYDEEVMIEKYIEGDEI
TCCILDGTALPILAIKPNKGSFFDYTSKYADGGSEEIVVEFEKPLQSKIEEISLKCWELF
KCKGYVRVDMILKDKVPYVLELNTLPGLTKNSLFPKSANGVNISFTELLDKIIQCSM
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaggaattataatgggtgggatatcttcagaaagagaagtttccctaaattca
ggaaaatccataataaactatatggataaaaataaatatgaaatagtacctattgttata
gataagaaaaatgatgtatttgaaaaagtaaaagatatagattttgcctttattgctctt
catggcaaatttggtgaggatggtataatacaatccgttttccaaaccatggatatacct
tattcaggctgcagccccttaaccagcggcatctgtatggataaggacataagtaagaaa
ctgctatattctgccaatataaatacagcagaatggatatgtataaaatccatagagaat
attgattatgactacttagaaaagatggggtatcctgtagttgtaaaaccaaattccggt
ggttcaagtgtagcaactactataatagaaaagagtgaagatatagaagaagctgctcgt
cttgcctttaattacgatgaggaagttatgattgaaaaatatatagaaggagacgaaata
acttgttgtatattagacggaactgccctacccatacttgccataaaacctaataagggt
tctttctttgattacacttcaaaatatgcagatggcggttctgaagaaatagtagtagaa
tttgaaaaaccacttcaaagtaagattgaagaaatatccctaaagtgctgggaactattc
aaatgcaaaggctatgtccgagtagacatgatattaaaagataaagttccctatgtactt
gagcttaatactctgccgggacttacaaaaaatagtcttttcccaaaaagcgctaatggg
gtaaatatatccttcacagaactattagataaaataattcaatgttctatgtaa
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