Clostridium sp. BNL1100: Clo1100_2028
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Entry
Clo1100_2028 CDS
T01708
Name
(GenBank) alanine racemase
KO
K18348
serine/alanine racemase [EC:
5.1.1.18
5.1.1.1
]
Organism
clb
Clostridium sp. BNL1100
Pathway
clb01502
Vancomycin resistance
clb02020
Two-component system
Module
clb_M00652
Vancomycin resistance, D-Ala-D-Ser type
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Clo1100_2028
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Clo1100_2028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
clb01504
]
Clo1100_2028
Enzymes [BR:
clb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
Clo1100_2028
5.1.1.18 serine racemase
Clo1100_2028
Antimicrobial resistance genes [BR:
clb01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
Clo1100_2028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Acyl_transf_3
HemY_N
Motif
Other DBs
NCBI-ProteinID:
AEY66220
UniProt:
H2JCR8
LinkDB
All DBs
Position
complement(2354499..2356658)
Genome browser
AA seq
719 aa
AA seq
DB search
MTNKREEYAGIDKFRIAAAIMIIAIHTSPLVSVSHEADFVLTRILARVAVPFFFMCTGYF
LIPRCIESPENRKRISLKFLAKTGFLYGAAILIYLPVNIYSEYFKEKPIIPTLVKDLIFD
GTIYHLWYIPASIIGFMIVYTVSTRISLKMVFTFSFILYLIGLFGDSYYGISEKFDVANS
FYGVLFSYFDYTRNGLFFAPVFIVLGAIIAESKREYSITKNIVGFALSFTALIAEALILK
HYSLQRHDSMYIMLVPTMIFLFRILLRIKGESQKTLRDISMLVYILHPLCIIFVRGFAKV
LNLEAYLIGNSLIHFIVVTVVTIAVSVAIVYIWKRLASYKRQTQPKRSRAWAEIDLERLK
HNVNQLKCLLPHECQLMAVVKSNAYGHGDIEISRFLNKAGISAFAVATLAEGIELRSNKI
KGEVLILGYTHPHEAPLLVKYNLTQTVVDYQYAELLDSTGLKIKVHIKIDTGMHRLGETN
DALSNLDRTYNCKNLIVGGTYTHLSTADSIEPSNILFTKEQIKKFYNTLNYLKSHNRNPS
KIHIQSSYGILNYPELDCDYARVGIALYGVMSKENEKTKVRADLMPVLSLKARIVLTKEI
EEGESVGYGRNFIAVKKTKIAVLCIGYADGIPRSLSCGKGYVLIKSKKAPIIGNICMDQL
TVDISEIPDVQQGDIATLIGDDGNEAITAEQVASMAGTITNELLSRLGSRIERLYKKVA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgactaacaaaagggaagaatatgccggtatagataaatttcgcatagctgctgccata
atgattatcgctattcatacatcaccactggtttcagtcagtcatgaagctgactttgta
ttgaccaggattcttgcaagagtcgcagtacctttcttttttatgtgtacaggctatttt
cttatacccagatgtattgaatccccagaaaacagaaaaaggatatcattgaaattcctt
gctaaaaccgggtttttatatggagctgcgatattaatatatctaccggtaaatatttat
tcagaatatttcaaagagaaaccaattattccgactcttgtaaaagaccttatatttgat
ggtactatataccacctttggtatattcctgcaagcattataggttttatgattgtatac
accgtgagtacaaggataagtttaaaaatggtgtttacattcagctttattttatacctg
attggcttgtttggtgacagctactacgggatatcggaaaaatttgacgtagcaaatagt
ttctatggggttttattctcatattttgattatacaagaaatggtttgtttttcgctccc
gtattcattgttctgggagccataatcgcagaatccaaaagggaatattcaataactaaa
aatatagttggatttgctttatcttttacagctcttatagcagaagccttaatattgaag
cattactctttacagaggcatgacagcatgtatattatgctggttcccacaatgattttt
ctgttcaggatattgctacgtataaagggagagagccaaaagactctcagagatatttca
atgcttgtttatatacttcatccactttgcattattttcgttaggggctttgcaaaggtt
ttgaacttggaggcatatctcatcgggaatagtttaatacattttattgttgtaactgtt
gtgacaattgccgtttctgttgctattgtatatatttggaaaaggttagcgtcctataaa
agacaaactcagccaaaaaggtccagagcatgggcggaaattgacctggaaaggcttaaa
cacaacgtaaatcagcttaaatgcctcctaccccatgaatgtcaacttatggctgttgta
aaatcaaatgcttatggacatggagatattgaaatatccagatttctgaataaagcaggc
atttctgctttcgcagttgcaaccctagctgaaggaatagaactacgttctaataaaata
aaaggagaggtattgatactcggatatactcatccccatgaagcacctttgcttgtaaaa
tacaatcttacacagacagttgtggattaccaatacgcagaactgttagacagcacaggt
cttaaaataaaggttcatataaaaattgataccggaatgcatagactaggcgaaaccaac
gatgctttatcaaatttagacagaacctataactgtaaaaacctgatagtgggggggaca
tatacccacttatcaactgccgatagtatagagccttcaaatattttatttacaaaagag
caaataaagaaattctataatactcttaactacttgaaaagtcataaccgtaaccccagt
aaaatacacattcagagcagttatggaatactcaattacccggagttggattgtgattat
gccagagtaggtatagctttatacggagtaatgagcaaagaaaatgagaaaacaaaggtt
cgtgctgacctgatgcctgttctgtcccttaaagccagaattgttcttacaaaagaaata
gaggagggtgaatctgtgggctacggcagaaatttcatcgccgtaaaaaaaactaaaata
gcagtcctttgtataggttatgcagacgggataccaaggagcctttcatgcggaaaagga
tatgtgcttattaagagtaaaaaagctcctataataggtaatatatgtatggatcagctg
accgtagacatttcggaaataccggatgtacagcagggtgatatagccacacttatcgga
gatgacggaaatgaggctataactgctgaacaggtggcttcgatggcagggaccattaca
aatgaattacttagtcgtctgggtagcagaattgaaagactatataaaaaagttgcctga
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