Caldicellulosiruptor acetigenus 6A: Calla_2388
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Entry
Calla_2388 CDS
T01600
Name
(GenBank) Heat shock protein 70
KO
K04043
molecular chaperone DnaK
Organism
clc
Caldicellulosiruptor acetigenus 6A
Pathway
clc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Calla_2388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clc03019
]
Calla_2388
03110 Chaperones and folding catalysts [BR:
clc03110
]
Calla_2388
03029 Mitochondrial biogenesis [BR:
clc03029
]
Calla_2388
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clc04147
]
Calla_2388
Messenger RNA biogenesis [BR:
clc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Calla_2388
Chaperones and folding catalysts [BR:
clc03110
]
Heat shock proteins
HSP70 / DNAK
Calla_2388
Mitochondrial biogenesis [BR:
clc03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
Calla_2388
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
Calla_2388
Exosome [BR:
clc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Calla_2388
Exosomal proteins of breast cancer cells
Calla_2388
Exosomal proteins of colorectal cancer cells
Calla_2388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Motif
Other DBs
NCBI-ProteinID:
AEM74915
UniProt:
G2PY48
LinkDB
All DBs
Position
complement(2549025..2550722)
Genome browser
AA seq
565 aa
AA seq
DB search
MHIGIDLGTTNTVVSYAKRKARGGVEPQVMRITQLDEYNSSIQEEILPSVLFLDFDGNIV
IGKKAKHMKQYHPGRTISNSKRYMGTSMVFRIEDRAFTPVDVAANILKVCKRTIELNLGG
KPVQQVTITVPASFNTDQIRDTRNAALKAGFDPDRIRIIPEPTAAFIDFINEQSELVEED
RLVDISTPKRVLVFDLGGGTCDIVVMDVVQSGNCLKVEEKAVGRYSELGGIDFDLAATRY
LLQKFFVDNKIKEGDVEPVEQSQMVNKLMAFCEKAKEFFSNQMMLNPEIESTNPSFKMNI
PEFWRGKSQLFSITLKEYNTATRDLYHSSGIKAKTIEDYERCKNIVDPIYETLERYEIDK
NSIDYIFATGGMSLYYKVVQRLKELFPKSQVIKASNPLEAVSRGAAIFSFYEVEIKRQNE
KASISKPTIKEPSSAEMEIVTKTVLAEAIMIDVEEGLPREIISKNQPVPYKGVIRDSFRV
TSPSGIKIDIYAGEDPYDCKMRIQKSFTGNFRSPVTPGTPLDIEYEIDENKYLKLRVVVK
DNMNPPIDLDVDSDVKTVGLEKVKE
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcacattggcattgaccttggaacaacaaacactgtagtgtcttacgccaagagaaag
gcaagaggcggcgttgaaccacaggtaatgaggattacccagcttgatgagtacaacagt
tcaatccaggaagagattttgccttcggtgctttttttggactttgatgggaatattgtg
ataggcaaaaaggcaaaacacatgaaacagtaccatccaggcagaaccatatcaaacagc
aagcggtacatgggcacatccatggtttttcgcattgaagacagagcgtttactccggtt
gatgtagctgcaaatattttaaaggtgtgcaaaaggacaattgagctcaaccttggcgga
aaacctgtacagcaggtaacaattactgtgccggcgtcgttcaatacagatcagataaga
gatacgcgaaatgcagccttaaaggcaggatttgaccctgataggataagaataattcca
gagcccacagcagcatttattgattttataaacgagcagtcagaacttgttgaagaggac
aggcttgttgacatctcaactcccaaaagagtgcttgtttttgaccttggtggtggcaca
tgcgatattgttgttatggacgttgttcaaagtggaaactgtctgaaagttgaagagaaa
gctgttggaagatacagtgagcttggtggcattgactttgacttagcagcaaccaggtac
ttgttacagaagttttttgttgacaacaagataaaagaaggagatgttgagcctgtagag
cagagtcaaatggtaaacaagctcatggccttctgtgaaaaagcaaaagagttcttttca
aaccagatgatgttaaatccagagattgaaagtaccaatccatcgtttaagatgaacatt
ccagaattttggcggggcaagtcccagctttttagcatcactctcaaagagtacaacact
gcaacccgagatttgtatcactcatcaggcataaaagcaaagacaattgaagattatgaa
agatgcaaaaacattgttgacccaatttatgaaaccttggaacgatacgagattgataaa
aattcaatcgattacatctttgccacaggggggatgagcctttactacaaagtggttcag
agattaaaagagctattcccgaaaagtcaggttataaaagcctcaaatccactggaggct
gtttcaagaggagcggctatcttttcgttctatgaagttgaaataaaaagacaaaatgaa
aaggcttctatttcaaaaccaactatcaaagaaccttcctctgccgagatggaaattgtt
acaaaaacagttttggcagaggctataatgattgacgttgaagaagggctgccaagagag
attatatctaaaaaccagcctgttccatacaaaggagtgattagagactcattcagggta
acaagcccgagtgggataaagatcgacatctatgcaggagaagacccgtacgactgtaaa
atgagaatacaaaaatcttttacagggaacttcagatcccctgttacacctggtacgcct
cttgatatcgaatatgaaatagatgaaaacaagtatctcaagctcagagtcgttgttaaa
gacaatatgaatcctccaatagacttggatgtggactctgatgtgaagacagttggttta
gaaaaagtaaaggagtga
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