Chlorobium limicola: Clim_1529
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Entry
Clim_1529 CDS
T00766
Name
(GenBank) D-alanine/D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cli
Chlorobium limicola
Pathway
cli00470
D-Amino acid metabolism
cli00550
Peptidoglycan biosynthesis
cli01100
Metabolic pathways
cli01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Clim_1529
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Clim_1529
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Clim_1529
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cli01011
]
Clim_1529
Enzymes [BR:
cli01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Clim_1529
Peptidoglycan biosynthesis and degradation proteins [BR:
cli01011
]
Precursor biosynthesis
Amino acid ligase
Clim_1529
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
ACD90579
UniProt:
B3EDF4
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All DBs
Position
1649740..1650831
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AA seq
363 aa
AA seq
DB search
MSKTTIALLFGGKSTEHEISIISARSISGAIDRERYRVVPVYITHEGAWFSGDSAAEILS
LDLSSIMRKSSVGNTETLLREMIRNSAEKPFDFNFRAAGIDVVFIALHGSYGEDGRVQGL
LDTMGIPYTGCGVSASAIAMDKALTKLCAADAGVATAPSITLDADSYLADPEPVHELVDS
TFGYPLFVKPASLGSSVGISKVHLPAALPEALKVACSYDRKILVEAAVSGKEIEVAVLGN
DRPVASVPGEVEPGSDFYDFQDKYIHNTAKTFIPARLPDKLLDSVRCSAITVYKALGCRG
MSRVDFFVNEENGSIVLNEINTIPGFTDISMYPKLFEASGIPFTALIDKLLHYAQEKPEA
AGR
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagacgaccattgcccttcttttcggaggtaaatcaacagaacacgaaatatcc
atcatttcagcccgttcaatttcgggagcaatcgacagggaacgctatcgtgttgttccg
gtgtatattacacatgaaggagcgtggttctccggagattcagctgctgaaatcctgagt
cttgacctgtcgtcaatcatgagaaagtcctccgtcgggaataccgaaacactgctcagg
gagatgattcgaaacagtgccgagaaaccctttgacttcaacttcagagcggcaggaatc
gatgtggtttttattgccctgcacggcagttacggagaggatggccgggtacagggatta
cttgataccatgggaatcccctataccggctgcggagtatccgcttcagcgatcgcaatg
gacaaggcccttacaaaactctgtgcagccgacgcgggagtagctacggcaccgtccatc
actctcgatgcggacagctatcttgccgatccggaacctgttcatgagcttgtcgacagc
acattcggctatcccctcttcgtcaagccggcaagtctcggatcctcggtaggcatctcc
aaggtccatctgcctgctgcacttccggaagccctgaaggttgcctgcagctacgacaga
aaaatacttgttgaagccgctgtcagcggcaaagagattgaggttgccgtactcggaaac
gaccggccagtggcttcggtgccgggcgaagtcgaacccggcagtgatttttacgatttt
caggacaagtatatccacaatactgcgaaaacattcattcctgcccgccttcccgataaa
ctgctcgacagcgttcgctgcagcgctataaccgtctacaaggctcttggctgcagaggc
atgtcgcgggtcgattttttcgtaaacgaagaaaacggctcgattgtcctcaacgaaatc
aacacgattccgggatttaccgatatcagtatgtatccgaaacttttcgaggcatccgga
attccttttaccgcacttatcgataaactcctgcactatgcacaggaaaaacctgaagcg
gcaggcaggtaa
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