Chondrinema litorale: OQ292_13995
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Entry
OQ292_13995 CDS
T09098
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
clit
Chondrinema litorale
Pathway
clit00300
Lysine biosynthesis
clit00470
D-Amino acid metabolism
clit00550
Peptidoglycan biosynthesis
clit01100
Metabolic pathways
clit01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OQ292_13995
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OQ292_13995
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OQ292_13995
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
OQ292_13995
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
clit01011
]
OQ292_13995
Enzymes [BR:
clit01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
OQ292_13995
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
OQ292_13995
Peptidoglycan biosynthesis and degradation proteins [BR:
clit01011
]
Precursor biosynthesis
Amino acid ligase
OQ292_13995
Racemase
OQ292_13995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Mur_ligase
bPH_7
Motif
Other DBs
NCBI-ProteinID:
UZR92970
LinkDB
All DBs
Position
3398076..3400535
Genome browser
AA seq
819 aa
AA seq
DB search
MNKPATLPEYFFKDLLQKKKLLTDSRKLQLSNESVFFAIKGKKHDGHIYISDLYEKGIRD
FVVKDVPEQSLLPNAKFYQVENVIEALQQLVALHRSQFKFPIVAITGSNGKTIVKEWLYQ
LLSPDFAIIKSPGSYNSQIGVPLSVWGIEERHQLGIFEAGISTTNEMEKLEEVIQPNVGI
LTNIGSSHDEGFDNREEKVKEKLKLFKNVDLLIYPKNIEVSSDLLNSVKAKKINWAFGET
ADFRFDVIQASGQKIKVICSYNSEKLELETNFSDAASLQNLATCITFILSFFNDRDKVID
SIKEGVKALRGVRMRLELKKGINECLLIDDTYNNDLAGLSVALDFLEQQSHASKKTVILS
DMLESGEESAMLYQKVNELLQQNAVSKFIGVGAEISRHRNVFTLAETAFYENTSSFLSDK
KQLGCFSKEVVLIKGARKFLFEEVVNALQEKIHGTHLEINLEAVTNNLNFYKSLLKPQTK
LMVMVKAFGYGSSGFEIAKLLQHHRVDYLAVAYTDEAVRLRENGITLPVMVMNPHPESFE
KLYQHDLEPQIYSLEILQHLIDFLQQKEAEKSMHVHINFDTGMRRLGFEVDDQKDLVATL
KQHAKKIQVKAVMTHLAGADEEEHNAFSLKQLESFEKVCNNMENELGYSFISHALNSAGI
ARFNDRQFDMVRLGIGLYGVEPNAFYQDKLQPVSTLKTTVSQVKKVKKGESIGYSRKGIA
KKDMEIGTIAIGYADGFDRRFGNGVGKVLVKGKLAPVTGSVCMDMTMIDVTGLNIKDGEE
VVIFGEVPTVEGLAKWVGTIPYEIMTNVNERVKRLYFNG
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaccagccactttaccagagtatttttttaaagatttattgcaaaaaaaaaaa
ttacttaccgatagcagaaaactccagttatctaacgagagtgtattttttgctattaaa
ggcaagaaacacgatgggcacatttatatctcagatttgtatgaaaaaggcattagagat
tttgtggtaaaagatgtgcctgaacaaagtttgttacctaatgcgaaattttatcaggtt
gaaaatgtgatagaggctttgcaacaattggtggctttgcatagaagtcaatttaaattt
ccaattgtcgccattactgggagcaacgggaaaaccattgtgaaggagtggctttaccaa
ttgctttcgccagattttgctattataaaaagtccgggcagttataactcgcaaataggc
gtgccgctttctgtttggggaattgaagaaaggcatcagttggggatttttgaggcaggt
atttcaactaccaatgaaatggaaaagctcgaagaagtaatccaaccaaatgtaggaatc
cttacaaatatcggcagctctcacgacgaaggttttgataacagagaagagaaagtgaag
gagaaattgaaactttttaaaaatgttgatttactgatctatcctaaaaatattgaagtt
tctagtgatttactcaattcagttaaagctaaaaaaataaactgggcatttggagagact
gctgattttcggttcgatgtaattcaggcatcaggacaaaaaattaaggttatttgttct
tataattctgaaaagttagagttagaaaccaacttttcagatgcggcctcactacaaaac
ctggctacatgtatcacttttatactgagtttttttaatgatagggacaaagttatagat
agcatcaaagaaggagtaaaagcattaagaggagtgagaatgcgattggagcttaaaaaa
ggaattaatgagtgccttttgattgatgatacctataataatgatcttgctggactttct
gtagcattagattttctggaacagcaaagccatgccagtaaaaaaacagtaatactttca
gacatgctagagagtggcgaagaatccgcgatgctctatcaaaaagtaaatgaactctta
cagcaaaatgcagtaagtaagtttattggagtcggtgctgaaattagccgtcatcgaaat
gttttcactttagcagaaactgctttttatgagaatacttccagttttttgtctgataaa
aaacaattgggttgcttctctaaagaagttgtgcttataaaaggagctagaaaatttctt
tttgaagaagttgtaaatgcgctccaagagaaaatacatggcacccacctagaaattaat
ctggaagctgtaacaaataacctcaatttctataaaagtcttttaaagccgcaaaccaaa
ctgatggtaatggtaaaggccttcggttatggaagcagtggatttgagattgcgaaacta
ctacaacaccacagagtagattatttggccgttgcttatactgacgaagctgttaggtta
agagaaaatggtattaccttacctgtaatggtgatgaatccacatccagaatctttcgaa
aagttgtatcaacacgatttagaacctcaaatttattcattagaaattcttcagcattta
atcgattttttacagcaaaaagaagcagagaagagcatgcatgtgcatatcaacttcgat
acaggtatgcggagattaggttttgaagtagatgatcaaaaagatttggtagcaacttta
aagcagcatgccaaaaaaattcaggtgaaagctgtaatgactcatttagctggcgccgat
gaagaagagcataatgctttctctttaaagcaattagaatccttcgaaaaagtatgtaac
aacatggaaaatgaattgggttatagttttatcagtcatgcgcttaactcagcaggaatt
gcacgctttaacgacaggcagtttgatatggtaagattaggtataggtttatatggggtc
gaacccaatgctttttatcaggataaacttcagccagtttctacactcaaaacaacggta
tctcaagtaaaaaaagtaaaaaaaggtgagagtatagggtacagcagaaaagggatagca
aaaaaagatatggaaattggaaccattgccattggctatgctgatggtttcgacagacgt
tttggaaatggtgtaggtaaagtattggtaaagggaaaattggctccagtaactggtagt
gtatgtatggatatgacaatgattgatgtaactggcttaaatataaaggatggtgaagag
gtagtgatatttggagaggtgccaacagtagaaggtttagcaaaatgggtgggtacaatc
ccttacgaaatcatgacaaatgtaaatgaaagagtaaaaagactatattttaatggctaa
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