KEGG   Clostridium ljungdahlii: CLJU_c03330
Entry
CLJU_c03330       CDS       T01276                                 
Name
(GenBank) type I restriction enzyme, endonuclease subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
clj  Clostridium ljungdahlii
Brite
KEGG Orthology (KO) [BR:clj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:clj02048]
    CLJU_c03330
Enzymes [BR:clj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     CLJU_c03330
Prokaryotic defense system [BR:clj02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   CLJU_c03330
SSDB
Motif
Pfam: SWI2_SNF2 ResIII EcoR124_C HSDR_N DEAD
Other DBs
NCBI-ProteinID: ADK13415
UniProt: D8GLL9
LinkDB
Position
346199..350155
AA seq 1318 aa
MYFDKETDFEEAVIKALIECGWESEVIRHPSEKDLIKNWANILFNNNRQRDRLNECPLTD
GEMQQIMEQIKLLQSPIKLNGFINGKSVSIKRDNPDDKEHFGKEVSLKIYDRQEIAYGES
RYQIVQQPHFPTKSPILNNRRGDLMLLINGMPVIHIELKKSGIPVSEAYNQIEKYSHEGV
FRGLFSLIQVFVAMQPEETVYFANPGEGVKFNKAFYFHWANFNNQPINKWDEVISKLLNI
PMAHMIIGFYTIADTDEGVLKVMRSYQYYAAIGIADKVAKKNWKDNNQLGGHVWHTTGSG
KTMTSFKSAQLIASSHDADKVIFLVDRKELGIQSLKEYRSFANESESVQATENTNILISK
LKSDDLDNTLIVTSIQKLSNISEEAQELNEADLKIIQSKRIAIIIDECHRSTFGEMLTNI
KNTFKHSIIFGFTGTPIQDVNIKKDSTTPTIFGDEIHRYTLADGIRDKNVLGFDPYMVKI
YDDSDLRQAVALHKAKAATVEEVMGDPKKEKMFYKYMDSSQVKMYGEQVDGKWVAGIEDF
IPNEQYQTAEYRNGVIADIKKKWTIYSRGRKFHAIFATSNIPEAVVYYRLMKAEMPNLSI
TAMFDPSIDNEGGGSLEKEDGIVEILEDYKAKFSQSFTIKSYDKFRKDVSLRLAHKKPYE
RITPDEQIDILIVVNQMLTGFDSKWVNTLYLDKVMEYENLIQAFSRTNRLFNVADKPFGI
IKYYRHPNTMEKNIEAAVKAYSGDIPTGLFVDKLPNNLRQMNSLFDEIQILFKNASISNF
ERLPDESSVKAKFAKQFKQFSTHLEAATIQGFIWSQKTYSDENGTSIVMHLDEMTYLILL
ARYMELAKGGGGGRSGDVPYEIDTHITEYDTEKIDADYMNSRFEKFLKLIESEYDAESLD
KTLKELHKSFSMLSQEEQKYAIIFIRDIQAGNIHVIPGKSFRNYISQMMKKAENDRIKRV
VNRLGCYEKLLREMLQRKVTKETIEAHGKFDELKATVDNQKARTFFILVEQDNYQESRLA
MYIEQYLRNFLLSGGEDPYSNVEYSEVIREKNESEYNASVGVVLTEEKMKGKSIVSSVKS
ATLNNWYSESKALACMLETDCFAYVENKLCIYDNKYIQRNQNGRMFLTNYAKEHEEECFL
QFIIDNETGKLHYITLPAAMASKSFNYYDEINEDLLTQYGLVNEISHEMLVAINGLDFGD
ALTKLMSKNICNYSVRLLRDTTGLDNRTISNMEKGNNLTKINVISACLGIQIPFRVSNKM
LQLAELSLNFDLPGKKGEENGIYDSVLHLKWATDYEDVYEELKEQNYEYLLHRPKKIK
NT seq 3957 nt   +upstreamnt  +downstreamnt
ttgtattttgataaagaaacagattttgaagaggctgtcataaaagccttgatagaatgt
ggttgggagtcagaagtaattcgacacccttcagaaaaagatttgataaaaaattgggct
aacattttgtttaacaataaccgtcaacgagaccgtttgaatgaatgtccattgacagat
ggagaaatgcagcagattatggagcagattaaactgctgcaatcccctatcaaattaaat
ggctttataaacggaaaaagtgtgtctattaaacgagacaacccagatgataaagagcat
tttggtaaagaggttagtttaaaaatatatgaccgacaagaaatcgcatatggcgaaagt
cgatatcaaatagtgcaacagcctcatttccctaccaaatctccaatcctaaataatagg
cgtggagatttgatgcttttgataaatggtatgccggttattcatattgaattaaagaaa
agtgggataccggtaagcgaagcatataatcagatagagaagtattctcatgaaggtgtt
tttagaggattattctcattaatacaagtttttgttgctatgcagccagaagagactgtg
tattttgcaaatcctggagaaggagtaaagttcaataaagcattttatttccattgggct
aattttaataatcagccaatcaacaaatgggatgaagtgatttccaagctgttaaatatt
cctatggcccatatgattattgggttttataccattgctgatactgatgaaggcgtgctg
aaagtaatgagaagttatcagtactatgcagcaattggtatagctgataaggtggcaaaa
aagaattggaaggataacaaccaattaggcggtcacgtatggcatacaaccggatcagga
aaaacgatgactagttttaaatctgcacagcttattgcaagttcacacgatgccgataaa
gtcatctttttggtagatagaaaggaattagggatacaatcattaaaggaatataggtcc
tttgcaaatgaaagcgaatcggtgcaagctactgagaatactaatatactgatttcaaag
cttaagagtgatgatttagataatactctaattgtaacttcaattcaaaagttaagcaat
atttctgaagaggcgcaggaactaaacgaagctgatttaaagataatccaatctaagcga
attgcaattattattgatgaatgtcatcgttccacttttggtgaaatgttaaccaatatt
aagaatacatttaagcattcaataatttttgggtttacgggtacacctatccaagatgta
aatattaagaaggatagcacaacaccaacaatttttggagatgaaatacatcgttacacc
ttggcagatggtatcagagataaaaatgttttaggttttgacccttacatggtcaaaatc
tatgatgactctgaccttagacaagcggtagctctacataaagctaaggctgctacagtg
gaagaagttatgggtgaccctaaaaaggagaaaatgttctataagtacatggattcatca
caggtaaaaatgtatggagaacaagttgatggaaaatgggttgcaggtattgaagatttc
ataccaaatgagcaatatcaaacagctgaataccgcaatggcgtaatagcggatattaag
aaaaaatggactatttatagtcgaggaagaaagttccatgcgatatttgctacaagcaat
attccagaggccgttgtctactatcgactaatgaaagcagaaatgcctaatttgtctatt
acagcaatgtttgacccaagcattgataatgaaggtggtggctctttagaaaaagaggat
ggaattgttgaaatacttgaagactataaggccaaattttcacagtcttttactattaag
tcatatgataaattcagaaaagatgttagcttaagattggctcacaaaaaaccttacgag
cgtattaccccagatgaacaaattgatatacttattgttgtgaatcagatgcttacggga
ttcgattctaaatgggttaacacattatatttagataaggtaatggagtatgagaattta
attcaggcattttcaagaactaatcgtttgttcaatgttgcggataaaccatttggcatc
attaagtattatagacatcctaatactatggagaaaaacatagaagctgcagtaaaggca
tattcaggagatatcccgacaggcttgtttgtagataaattgccaaacaatctgcgacaa
atgaattctttatttgatgaaatacagattttatttaaaaatgcaagcattagcaatttt
gaaagattaccagatgagtcttcggtaaaagctaaatttgcaaagcaatttaaacagttt
tctacacatttagaagcagcaacaatacaaggatttatttggagtcaaaaaacatattcc
gatgaaaacggtacaagtatcgtaatgcacttagatgaaatgacatacctcattcttctt
gctagatatatggaattagctaaaggcggtggtggtggacgcagtggagatgttccatac
gaaatcgacacacatattacggaatatgatacagaaaaaattgatgcagactatatgaac
tctcgatttgaaaagtttcttaagttgatagaaagtgaatatgatgcagaatctttggat
aagacattaaaagaacttcataagtcattctctatgttatcacaagaagaacagaaatat
gcaattatttttatccgtgatattcaagcaggaaatattcatgttatacctggtaaatcg
tttagaaattatatctcacaaatgatgaaaaaagcagagaatgacagaattaagagagtt
gtaaatagacttggttgctatgaaaaacttcttcgtgaaatgctacaaagaaaagtcaca
aaagaaacaatagaggctcatgggaaatttgatgaattaaaagctacggtagataaccaa
aaagcaaggacattctttattttggtagaacaggacaactaccaagaatcaaggctcgct
atgtacatagagcaatatttgagaaattttcttttgagtggtggcgaggatccttattct
aatgttgaatatagtgaagttataagagagaaaaatgaaagcgaatataatgctagtgtt
ggggttgttttgacagaagaaaaaatgaaaggaaaatctatcgtatcttctgtaaaaagt
gcaacactgaataattggtattcggaaagtaaggcattagcttgtatgttagaaacagat
tgtttcgcttatgtagaaaacaagctatgcatctacgataataaatatattcagcgtaat
cagaatggaagaatgttccttacaaattatgcaaaggaacatgaagaagaatgtttcctt
caatttataattgataatgaaaccggaaaattgcattatataacattacccgcagctatg
gcgagcaaatctttcaattactatgatgaaataaatgaagatttacttacacaatatgga
cttgtgaacgaaatatcacatgaaatgttggtagctataaatgggcttgactttggtgat
gcactcactaagctgatgagcaaaaatatttgcaactattctgttagattgttgagggat
actacaggcttagataatagaactattagtaacatggaaaaaggaaacaaccttacaaaa
attaatgttatttcagcttgtttgggtatacagattcctttccgtgttagtaataagatg
ctacaactcgctgagttatctttgaacttcgatttacctggaaaaaaaggtgaagaaaat
ggaatatatgattccgttctacatctgaaatgggcaaccgattatgaggatgtctatgag
gagttgaaagaacagaattatgagtatttgcttcatagaccaaagaaaattaaataa

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