Clostridium ljungdahlii: CLJU_c31970
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Entry
CLJU_c31970 CDS
T01276
Symbol
hemD
Name
(GenBank) porphyrin biosynthesis protein HemD
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
clj
Clostridium ljungdahlii
Pathway
clj00860
Porphyrin metabolism
clj01100
Metabolic pathways
clj01110
Biosynthesis of secondary metabolites
clj01120
Microbial metabolism in diverse environments
clj01240
Biosynthesis of cofactors
Module
clj_M00924
Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
clj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
CLJU_c31970 (hemD)
Enzymes [BR:
clj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
CLJU_c31970 (hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
CLJU_c31970 (hemD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
ADK16244
UniProt:
D8GQT9
LinkDB
All DBs
Position
complement(3496789..3498249)
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AA seq
486 aa
AA seq
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MGKVYLIGAGPGDEELITLKAVRKLSECTAVMYDRLAGPGILKYVNEDCEIYYCGKEPGC
HYKNQDEINNMLVELAKKGHVVGRIKGGDPYVFGRGGEEALALLKENIEFEVIPGITSPI
SALNYAGIPVTHRKVARSFHIFTGKTAEKLDINWEAAAKIGGTLIFLMGFRNLEVICSKL
KENGMDENTPCAVVMRGTTSKQKKVVGKIKDIKEKAEEAGLTSPCIIVIGDVIKFNEQLD
WYEKKPLFGKNVCITRSKAQSREMREKLLDLGAQVTEIHSIEIKYTSENIKEYLDKLLEY
DYIIFTSVNGVNSFFERLLTENYDIRNIKGKFAAIGPATERAIKSKGIIPEIVAEKFVAE
SLHDKMKGFIKKGDKVFIPRSKNARPYLAEALREEGCIVDECYTYETVAGSLTDKNCFND
VDTVIFTSPTTVRNMIELVGLSAIKEKQVISIGPITGKELKKHDIDYEMSEEYTTDGVIK
QLLEGK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagtttatcttattggtgcaggacctggagatgaggaacttataactttaaag
gcagtgagaaaattaagtgaatgtactgcagttatgtatgacaggttggcaggccctgga
attttaaaatatgtaaatgaggactgtgaaatatattactgtggtaaggaaccaggatgc
cattataaaaatcaagatgaaataaataacatgttagttgaacttgctaaaaagggacat
gtagtaggaagaattaaaggcggagatccctatgtatttggaagaggaggagaagaagcg
ctggctcttttaaaagaaaatatagagtttgaggtcataccgggaataacttctccaata
tcagccttaaattatgcaggaatacctgtaactcatagaaaggtagctcgaagctttcat
atctttacaggaaagactgctgaaaagctggatataaattgggaagctgcagctaaaata
ggaggaacactgattttcctaatgggatttagaaacttggaagtaatatgcagcaagctt
aaggaaaatggcatggatgaaaatactccttgtgccgtagttatgaggggaactacttca
aagcagaaaaaagttgtaggaaaaataaaagacataaaagaaaaagctgaagaggcagga
ctaacttctccctgcataatagttataggagatgttataaaattcaatgagcagcttgat
tggtatgagaaaaagcctctctttggaaaaaatgtatgtatcacaaggtcaaaggctcag
tcacgtgaaatgagagaaaaacttcttgatttaggagctcaggttactgagatacattcc
atagaaataaaatatacttcagaaaatatcaaagaatatttagataaattgctggagtat
gattatattattttcaccagcgtaaatggggtgaacagcttttttgaacgacttctaacc
gaaaattatgatattagaaatataaaaggaaaatttgcagctataggccctgccacagaa
agagctataaaaagtaagggaattatacctgaaatagtagcagaaaagtttgtagctgaa
agtctccacgataaaatgaaaggtttcataaaaaaaggagacaaggtatttattccaaga
tctaaaaatgcaagaccttatttggcagaagccttgagagaagaaggctgcatagtagat
gaatgttatacttatgagacagtagctggaagcttaactgataaaaattgtttcaatgac
gtagatacagttatttttacaagtccaactacagttagaaacatgatagaacttgtaggg
ctttctgctataaaggaaaaacaggtaatttctataggacctataacaggtaaagagctg
aaaaagcatgatatagattatgaaatgtctgaagaatatactacagacggagttataaaa
caactattagaagggaagtaa
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