Campylobacter lari RM16701: UPTC16701_0530
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Entry
UPTC16701_0530 CDS
T03550
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
clr
Campylobacter lari RM16701
Pathway
clr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
clr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
UPTC16701_0530 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clr01007
]
UPTC16701_0530 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clr03016
]
UPTC16701_0530 (serS)
Enzymes [BR:
clr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
UPTC16701_0530 (serS)
Amino acid related enzymes [BR:
clr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
UPTC16701_0530 (serS)
Transfer RNA biogenesis [BR:
clr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
UPTC16701_0530 (serS)
Prokaryotic type
UPTC16701_0530 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Relaxase
SAS-6_N
Cytidylate_kin2
Syntaxin_2
Motif
Other DBs
NCBI-ProteinID:
AJD04576
LinkDB
All DBs
Position
complement(503017..504252)
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AA seq
411 aa
AA seq
DB search
MLDLKLLQNNFDEIAQKLKAKKVDANLLKELSDLFVNLKKEKALLEEFQAFQNKFSKELA
TAQDKESLKAQLSQNKEKINTQSKIVNELEEKLEQIALAIPNTPDECVPFGEDEDENVEL
KKVLTPPSFDFEIKEHHDLGEKLNWLDFTRGVKISQSRFCVLKNEGALLSRALVNYMIDF
NRSRGFELVNVPFLVNSATMYGTGQLPKFKDDMYKVENDDLYLISTSEIPVTNLYSNEIL
TQEELPLKMTCYSACFRQEAGSAGRDTRGIIRQHQFEKVELVSICKPDQSELMFEEMLNC
ASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPSQNKYREISSVSNCKDFQARRAK
IRFKNDKGKNELVHTLNGSSLAVGRTLVAIMENYQEKDGSIRIPDVLRKYF
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgttagatttaaaacttttacaaaataattttgatgaaattgcacaaaaactaaaagct
aaaaaagtagatgcaaatttactcaaagaactgagtgatttatttgtaaatttaaaaaaa
gaaaaagcacttttagaagaatttcaagcttttcaaaataaatttagcaaagaacttgca
acagcacaagataaagaaagtttaaaagcacaactaagtcaaaataaagaaaaaattaat
actcaatcaaaaatcgttaatgaattagaagaaaaactagaacaaattgctctagcaata
ccaaacacccctgatgaatgcgtgccttttggagaagatgaggatgaaaatgtagaatta
aaaaaagttctaactccacctagttttgattttgaaattaaagaacatcatgatttagga
gaaaaattaaattggcttgattttacaagaggagttaaaatctcacaaagtcgcttttgt
gtacttaaaaatgaaggggctttactaagcagagctttagtaaattatatgatagatttt
aatagaagtagaggttttgaattagttaatgtaccatttttagtaaatagcgcaaccatg
tatggtaccggacaacttcctaaatttaaagatgatatgtataaggtagaaaatgatgat
ttatacctcatctcaacttctgagatccccgtaactaatctttattctaatgaaatttta
actcaagaagaattgcctttaaaaatgacttgctatagcgcttgttttagacaagaagca
ggaagtgcaggtagagacacaagaggtattataagacaacatcaatttgaaaaagtagag
cttgttagtatatgcaagcctgatcagagtgagttaatgtttgaagaaatgctaaattgt
gctagtgatttactaagttctttaggtctagcacatagacatttgatgctttgcactgga
gatttaggtttttcagctgcaaaaacagtggatttagaagtttggcttccatcgcaaaat
aaataccgtgaaattagctctgtatctaattgtaaagattttcaagcaagacgtgcaaaa
attcgctttaaaaacgataaaggcaaaaacgaattagtgcatacgcttaatggctcttcg
ctagctgttggaagaaccttggtagctatcatggaaaactatcaagaaaaagatggaagt
ataagaattcctgatgtattaagaaaatacttttaa
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