Clostridium bornimense: CM240_0973
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Entry
CM240_0973 CDS
T03165
Symbol
ddl3
Name
(GenBank) D-alanine-D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
clt
Clostridium bornimense
Pathway
clt00470
D-Amino acid metabolism
clt00550
Peptidoglycan biosynthesis
clt01100
Metabolic pathways
clt01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CM240_0973 (ddl3)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CM240_0973 (ddl3)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CM240_0973 (ddl3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
clt01011
]
CM240_0973 (ddl3)
Enzymes [BR:
clt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CM240_0973 (ddl3)
Peptidoglycan biosynthesis and degradation proteins [BR:
clt01011
]
Precursor biosynthesis
Amino acid ligase
CM240_0973 (ddl3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
RimK
GARS_A
CPSase_L_D2
ATP-grasp
ATPgrasp_ST
ATP-grasp_5
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
CDM68137
UniProt:
W6S1G5
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All DBs
Position
rep1:1081252..1082154
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AA seq
300 aa
AA seq
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MKVGVLMGGISTEREISLKSGEGIVASIDREKYDVVPIVIDSKDDVINKVKDLDFAFLAL
HGKFGEDGSVQSVLETFEIPYSGCGPMTSAICMDKDMTKKVLKASDIRTARWTMAKSTEN
INFDKIEEMGYPVVVKPNGGGSSVATNLAHSKEEVIDAVKLALDVDKEVMIEEYIKGDEI
TCCMINRRIYPVIAIKPTGEFFDFASKYEAGGAEEVVVTLEENLHKEVERLAVACWDALK
CESYVRVDMIIKDGVPYILELNTLPGMTEASLFPKSAKAAGLSYDKLITTFIEESLKIER
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaggagttttaatggggggcatttccactgaaagagaaatatccctaaagtct
ggagaaggaatagtagcaagtatagatagagaaaaatatgatgtagtgccaattgtgata
gattctaaagatgatgttattaataaagttaaagatttagattttgcttttttagctctt
catgggaagtttggagaagatggatcagtacaaagtgtactagaaacttttgaaatacca
tactcaggatgtgggcctatgacatcagctatatgtatggacaaagatatgaccaaaaaa
gttttaaaagcaagtgacataagaacggcaagatggactatggcaaaatctacagagaat
ataaattttgataagattgaagaaatgggataccctgtagtagttaaaccaaatggtggg
gggtcatcagtagctactaatcttgctcatagtaaagaagaagttatagatgctgttaag
ttagcattagatgtagataaagaagttatgattgaagagtatataaaaggtgatgaaatt
acttgttgtatgataaatagaaggatatatccagttattgcgataaagcctactggtgaa
ttttttgactttgcttcaaaatatgaagctggtggagctgaagaagttgtggtaacctta
gaagaaaaccttcataaagaagtagagagactggcagtagcttgttgggatgcattaaaa
tgtgaaagttatgtaagagtagacatgataataaaagatggagtaccatatattttagaa
cttaatacattaccaggtatgacagaagcttcacttttccctaaaagtgcaaaagctgca
ggattatcttatgataaattaataacaacttttattgaagaatcattaaaaatagaaaga
tag
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