Clavispora lusitaniae ATCC 42720: CLUG_02166
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Entry
CLUG_02166 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K12609
CCR4-NOT transcriptional complex subunit CAF120
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLUG_02166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clu03019
]
CLUG_02166
Messenger RNA biogenesis [BR:
clu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CLUG_02166
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH
Motif
Other DBs
NCBI-GeneID:
8499477
NCBI-ProteinID:
XP_002618707
UniProt:
C4Y1T4
LinkDB
All DBs
AA seq
1112 aa
AA seq
DB search
MKFITRSPKKKSVRPPPPAEAPRDSATFADGEISPELVPIVTLLSSQAHRRYYEGIFMLY
YDLNGDGKPGDRQWKEVYGILTGNQLAYWDVANLAEFKNSPERLLESSSKPNYLNFTDAI
FNAMKVLPAAKQQLENVIIVSTTMKNRYIIQFRSFDMLTEWYLALRLATFEYQSLQEAYT
GALLSARGSRLSDIRTILAEKRFNHQDWVKIRYGSGMAWKRCYAVIEPSTSKRKKFIPGR
IVLYENETMKKKALMGVITHATSVTAVYPQSPFFIDQSTIMKLEGAINFDVGSGKPKKKD
HNENMETSLFLMPESHSAVPGFDTLIRFLIPLFDAFGLYGRPAMLKADRIDPQSLLFGLP
TLPHVHYLNLSDLESLTGSDQYLEWDARTWKNNLKRVLQSKLAQGYEGCGSARGFSGAIN
SLNSPSLASPGTAKSSPTTMRSVSGPAPTDRILPAKPRTASGFAKSSSPPAFGASPSGVG
ASQLGQAAPVSMPQIAVLGEDAPKLPPSDPNREVASRGQRNVNNLAIDTEEPTRKSLQLA
DIYHKYSKIQTPSDRFNDRNEILNGSAEELDEEALPSLMRKKSLMHGPYPTTERHLLNAS
DDDEEEEQDEDDEDDDYSSASSVQKERPLNTGLLVPSVERLEQSHSPNTQYSEFNKQFSQ
AVDRRYDTESSGSEELSPPPSPPRHSQEAERFSGSYQAQQLPQIQQIQQLRSQQTVNAPL
QSPSAAQTSFSDQHRSAQKAPAQQTQQTQGGQKTAIQKSSAVTNLSHNLMREEVASPTSE
HYRPRYISSPNSSQNQVHQFADVRTEKPQSSSKENGSLPPVQTSHKIPAYAQNTAYAAYG
QPSSPGTMNAPRSPVQPFPNGPGHQPGSRPHVSGGPSGPSGPGQYGPGYGQQYAPAQKPG
NQKPMTPQAGGQKPGQYPGQPGGGHYAAGNNAYPPQNYPRQNFPQNHSAQNYPSQNQPSQ
NQPPQNYPPQNYPQQNYPPRAQYQQRQVRSQPGQKPLPNQMNQVGQRPHPGQPSQPAQKP
LPTQPGQPQARPGDHPYQQRVNASQQYPRPGTTTGQNPSSFRSYDGNPYQYQVQSTYTSP
APGPAMHKGPGDARGQNPNAKSDSRQGGYRQY
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcacacgcctgcccaagaagaaaagcgtccgcccaccgccgcccgcagag
gcacctcgagactcggccacgtttgccgatggcgagatctcgcctgaactcgtgcccatc
gtcacgttgttgtcgtcgcaggcccaccgacgctattatgaaggaattttcatgttgtat
tatgatttgaacggcgacggcaagcccggcgaccgccaatggaaggaggtgtacggtatc
ttgaccgggaaccagctcgcgtactgggacgtggccaacttggccgagttcaagaacctg
cctgagcggcttctcgagtcttcaagcaaacccaactacctcaacttcaccgacgccatt
ttcaacgccatgaaggtgcttcctgctgcgaaacagcagcttgaaaacgtgatcatcgtg
ctgaccacgatgaagaacagatacatcatccagtttcgttcgttcgacatgcttaccgaa
tggtacttggctcttcgattggccacgttcgagtaccagtctttgcaagaagcctacact
ggtgcgctcttgtcggcgcgtgggctgcggttgtccgatatccgcacgatattggcggaa
aaacgcttcaaccaccaggactgggtgaaaatccgctatggctcgggcatggcatggaaa
cggtgctatgcggtgatcgagccgctgaccagcaagcgcaaaaagttcattccgggccgt
attgtgctttatgaaaacgaaacaatgaagaaaaaagctctcatgggtgtgattacccac
gccacgctggtgacagccgtgtatccgcagctgccctttttcattgaccagagcaccatc
atgaagctcgagggggccatcaattttgacgttggctcaggaaaaccaaagaaaaaggac
cacaatgaaaacatggaaacgtcgctctttcttatgcccgagctgcattcggcggtgcct
ggttttgacaccttgatccggtttttgatcccgcttttcgatgcctttggcttgtacggc
cgcccggccatgttgaaggccgaccgcattgacccgcaatctcttttgttcggtttgccc
acgttgccccacgtccactatctcaatttgtccgacttggagtccttaacggggtcggac
cagtacttggaatgggacgcccgcacgtggaaaaacaacctcaagcgtgtgttgcagctg
aagttggcgcagggctatgagggctgcggttcagcacgtggcttcctgggcgccatcaac
tcgttgaacagcccgctgctagcaagcccaggcacggccaagtcgtcaccaacaacgatg
cggctggtttctgggcctgcgccgacagaccgcattcttccggcgaaaccacgcacagct
tctgggttcgccaagtcgctgagtccgcctgcgtttggcgccagcccgtctggcgttggc
gctagtcagttgggccaggctgcgccggtgtcgatgccgcagattgccgttttgggcgaa
gacgctccgaagctcccaccgtcagaccccaatagggaagtggccagccgaggccagcgc
aacgtcaacaacttggccatcgacacagaggagcccacgcgcaagtcgttgcagttggca
gacatttaccacaagtactcgaagatccaaacgccgtcggaccgcttcaacgacaggaac
gagatcctcaacggcagcgccgaggagctcgacgaagaagcgctccccagcttgatgcgc
aaaaagtcgttgatgcacgggccatacccaaccacagagagacacttgttgaacgccagc
gacgacgacgaagaagaagagcaggacgaggacgacgaagacgacgactactcctcggcc
agcctggtgcagaaagagcggcctctcaataccggcttactagtgccaagtgtcgagagg
ctcgagcagtcgcactcgcccaacacccagtactcggagttcaacaagcagttttctcag
gccgtggacaggcgctacgacaccgagctgtcgggctcggaggagctttcgccgccgccc
agcccgccccgccactcgcaggaggccgagcggttttctgggctgtaccaggcgcagcag
cttccgcagatccagcagatccagcagttgcggtcgcagcagacggtcaacgcgccgttg
cagagcccttcggccgcgcagacatcgttttccgaccagcaccgcctggcccagaaggca
ccggcccagcagacccagcagacgcaagggggccagaaaaccgcgattcaaaagtcatcc
gccgtgaccaacttgagccataacctcatgcgtgaggaagtcgcctctcccacgagcgaa
cattatcggccgcggtatattctgtcgcccaacagctcgcagaaccaggtgcatcagttc
gcagatgtgcggacggagaagccacaaagcctgctgaaagaaaacggcctgcttccgccg
gtgcagacgtctcataagatcccagcttacgcgcaaaacacggcttatgccgcctatggc
cagccttcgtcgcctggaactatgaatgctcctcgctcgcctgtccagccgtttccaaac
ggtccaggccatcaacctggcctgcgtccacatgtttcgggcggtcctctgggaccttcc
gggcctggacaatacggaccgggctacggccagcagtatgctcccgcgcagaagcctgga
aaccagaaaccgatgactcctcaagccggtggacagaaaccgggccagtatccaggccag
ccgggaggcggacactatgctgctggaaacaatgcgtatccaccgcagaactatccacgc
cagaacttccctcagaaccactcggctcagaactatccactgcaaaaccaaccactgcaa
aaccaaccaccgcagaattatccaccgcagaattatccacagcaaaactacccccctcgt
gctcagtaccaacaaaggcaagttagaagccaaccaggacaaaaaccgcttcccaaccaa
atgaaccaggtcgggcaaagaccacatccaggccagcctagccagcccgcacaaaagcca
cttccaacccaaccaggtcaaccgcaggctcgtccgggcgaccacccctaccaacagcgt
gtgaatgcttcgcaacagtacccacggcctggaacgacaacgggccagaaccctctgtct
ttccgctcctatgacggaaatccctaccagtaccaggttcagtcgacatacacgctgcct
gctccaggaccagcgatgcacaaaggtccaggcgatgctcgaggccaaaatccaaatgcc
aaatcagactcgcgacagggaggttatcgccagtactag
DBGET
integrated database retrieval system