Canis lupus dingo (dingo): 112677564
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Entry
112677564 CDS
T08371
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud03030
DNA replication
clud03420
Nucleotide excision repair
clud03430
Mismatch repair
clud03440
Homologous recombination
clud03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112677564 (RPA1)
03420 Nucleotide excision repair
112677564 (RPA1)
03430 Mismatch repair
112677564 (RPA1)
03440 Homologous recombination
112677564 (RPA1)
03460 Fanconi anemia pathway
112677564 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clud03000
]
112677564 (RPA1)
03032 DNA replication proteins [BR:
clud03032
]
112677564 (RPA1)
03400 DNA repair and recombination proteins [BR:
clud03400
]
112677564 (RPA1)
Transcription factors [BR:
clud03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112677564 (RPA1)
DNA replication proteins [BR:
clud03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
112677564 (RPA1)
DNA repair and recombination proteins [BR:
clud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
112677564 (RPA1)
MMR (mismatch excision repair)
112677564 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
112677564 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
112677564
NCBI-ProteinID:
XP_025331929
Ensembl:
ENSCAFG00020009847
LinkDB
All DBs
Position
9:47155247..47231573
Genome browser
AA seq
616 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGETSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEEQLSSNCICQINRFIVNTLKDGRRVVILMELNILKSAEAVGLKIGNPVPYNE
GHGQQQAVPSPVSAANPPANKPQQQNGSSAMGFTASKTYSASKTFGKPGGTSLASSSGGT
QVKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QVDKFFPLIDMNKVYYISKGILKIANKQFTAVKNDYEMTFNNETSVMPCEDGHHLPTVQF
DFTGIGDLESKTKDSLIDIIGICKSYEEATKITVKSNNREVSKRNIYLMDMSGKVVTATL
WGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQ
ALDGISISDLKSGGTGGGNTNWKTLYEVKSENLGHGDKADYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDSEFPSFKYRMILSVNIADFQENQWVTCFQESAEAII
GQNTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDYR
EYGRRLIMNIRRNALM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggccattgcggccataatgcaacagggagaaacatcc
ataaaacccatcctccaagtcattaacatccgtcccattactacggggaatagtccaccc
cgttatcgactgcttatgagtgatggattgaacactctatcctctttcatgttggcaaca
cagttgaaccctctcgttgaggaagaacaattgtctagcaactgtatttgccagattaat
cgatttattgttaacactctgaaagatggaaggagagtagttattttgatggagttaaac
attttgaaatcagccgaagcagttggattaaagattggcaatcctgtgccctataatgaa
ggacatgggcagcagcaggcagttccttctccagtctcagcagccaatccaccagccaac
aagccccagcaacagaatgggagctcagcaatgggtttcactgcttctaagacttacagt
gcctcaaagacatttggaaaacctggaggtaccagcctagcgagtagttctggagggaca
caggtcaaagtggtgcccattgccagccttactccttaccaatccaagtggactatctgt
gctcgagttaccaacaaaagtcagatccgtacctggagcaattcccgaggggaagggaag
cttttttccatagaactagttgatgaaagtggtgaaatcagagctactgctttcaatgag
caagtggacaagttctttcccctcatcgacatgaacaaggtctattatatctctaaaggc
atcctgaagattgctaacaaacaattcacagctgttaaaaatgactatgagatgaccttc
aataatgagacttctgtcatgccctgtgaagatggtcatcatttacctacagttcagttt
gacttcacagggattggtgacctagaaagcaagactaaggactcacttatagacataatt
gggatctgcaagagctatgaagaagccaccaaaatcacagtgaagtctaacaacagagaa
gtttctaagagaaatatctatttgatggacatgtcagggaaagtagtgaccgctactctg
tggggggaagatgctgatagatttgatggttctagacaacccgtgatggctatcaaagga
gccagagtttctgattttggtggacggagcctctctgtactgtcttcaagcacgatcatt
gtgaatcctgacatcccggaggcctataaacttcgtggatggtttgactcggaaggacaa
gccttagatggtatttccatctctgatctaaagagtggagggacaggaggaggcaacacc
aactggaaaactttgtatgaggttaaatcagagaatctaggccatggtgacaaggctgac
tattttagctccgtggcgacagtagtgtatcttcgcaaagagaactgtatgtatcaggcc
tgcccaactcaggactgcaataagaaagtgatcgatcaacagaatggattataccgctgt
gagaagtgtgacagtgaatttcctagcttcaagtaccgcatgatcctgtcagtaaatatt
gctgattttcaagagaatcagtgggtcacttgtttccaggagtctgcagaggccatcatt
ggacaaaatactgcttatcttggggaattaaaagagaagaacgagcaagcatttgaggaa
gttttccagaatgccaacttccgatctttcacattcaggatcagggtgaaactagagacc
tacaacgatgagtctcgaattaaggccactgtgatggacgtgaagcccgtggactacaga
gaatatggtagaaggctgatcatgaacatcaggagaaacgcactaatgtga
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integrated database retrieval system
