Cyclopterus lumpus (lumpfish): 117729342
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Entry
117729342 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: retinal Mueller cells isomerohydrolase-like
KO
K11158
retinoid isomerohydrolase / lutein isomerase [EC:
3.1.1.64
5.3.3.22
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00830
Retinol metabolism
clum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00830 Retinol metabolism
117729342
Enzymes [BR:
clum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.64 retinoid isomerohydrolase
117729342
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.22 lutein isomerase
117729342
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Gene cluster
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Motif
Pfam:
RPE65
Motif
Other DBs
NCBI-GeneID:
117729342
NCBI-ProteinID:
XP_034386212
Ensembl:
ENSCLMG00005016684
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All DBs
Position
4:complement(5665618..5673454)
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AA seq
582 aa
AA seq
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MREGGTEGEKRGGGRGPQFLPSPQEICVWFKYQPESLSAEKQSAXGTYSSMASRVEHPAA
GYKKIFETVEELNEPLPAKISGVIPSWLGGSLLRMGPGLFEVGGEPYYHLFDGQALMHKF
DLKNGQVTYYRKFIRTDAYVRAMTENRVVLTEFGTAAYPDPCKNIFSRFFTYFRGIEVTD
NCLVNICPIGEDFYAVTETNYITKVDPDSLETLKKVDLCKYLSVNGVTAHPHTDADGTVY
NIGNCFGKNMSLAYNIVKIPPAQKDKSDPLEKSQVLVQLPSSERLKPSYVHSFGMTDNYF
VFVEQPVKINLFKFLSAWSVRGATYMDCFESNDSMGTWFHLATKDPADYLSSHKFRTSAF
NIFHHINAYEEQGFIVVDLCTWKGHDFVYNYLYLANIKEEWEEVKKAAMRAPQPEVRRYV
LPLDIHREEQGKNLVSLSYTTATAVLRRDGTVWLEPEVLFSGPRQAFEFPQINYSLCSGK
KYSFAYGLGLNHFIPDRIVKLNVQTKETRVWQEDECYPSEPLFVPTPGATEEDDGVLLSI
VVKPGAERPGFLLVLDAMKLTELARAEVNAIIPVTFHGIYKP
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaggaggtactgagggggaaaaaagagggggggggagggggccacaattcctc
ccctcaccgcaggaaatctgtgtgtggtttaaataccagcccgagtctctttctgcagaa
aagcagtctgcctgaggaacatacagcagcatggccagccgtgtggagcatcctgctgca
ggctacaagaagatctttgagacggtggaggagctgaacgaacctctacctgctaagatc
agtggtgttataccttcatggcttggcggaagtcttctaaggatgggtccaggtcttttc
gaggtgggtggtgaaccttactaccacctgtttgatggacaggctctcatgcacaagttt
gacctgaagaacggtcaggtgacctactacaggaagttcatcaggacggatgcgtatgtt
cgtgccatgacagagaaccgagtggtcctcactgagtttggaaccgcggcctacccagac
ccctgcaagaacatcttctccagattctttacttacttcagaggaatcgaggtgactgat
aactgcctcgtgaacatctgtccaatcggtgaggacttctatgccgtcactgagaccaac
tacatcactaaggttgatcctgattcgctggagactttaaagaaggtggacctatgtaag
tacctctctgtgaacggggtgactgcccacccccacactgatgcagatggtacagtctat
aacatcggcaattgctttggcaagaacatgagtctggcttacaacatcgtcaagatcccg
cctgctcagaaagacaagtccgatcccctggagaaatcccaggtgctcgttcagctaccc
agcagtgagaggttaaaaccctcctacgtacacagttttggtatgacagacaactatttt
gtgtttgtggagcagccggtgaagatcaacctgttcaagttcctgtcggcttggagcgtc
agaggagccacatacatggactgctttgaatccaacgacagcatggggacatggttccac
ctggccactaaggacccagcagattatctgagcagccacaagttcagaacgtcagctttc
aacatctttcaccacattaacgcctatgaggagcagggcttcatcgtggtcgacctctgc
acatggaagggtcacgactttgtgtataactacctgtacctggccaacataaaagaggag
tgggaggaagtgaagaaagcagcgatgagagctccccagccggaggtcagacgatacgtt
ctgccactggatatacacagggaagagcaggggaagaatctggtgtccctgtcctacact
acagctactgctgttcttcgccgtgacggcactgtctggctcgagcctgaagtcctcttt
tctggaccaagacaggcctttgagtttccacagattaactactctctgtgtagtgggaag
aagtattccttcgcctatggtctgggcctcaaccacttcattcctgacaggatagtaaag
ctgaacgtacagaccaaagagacccgggtgtggcaggaggacgagtgttacccgtcagag
ccgctgtttgtaccgacacctggagccaccgaggaggatgatggtgtgctgctgagcatt
gtggtgaagccgggtgccgagagaccaggtttcctgctggtgctggacgccatgaaactg
accgagctggccagggctgaggtcaacgccatcatcccggtgaccttccacggcatttac
aaaccatga
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