Cyclopterus lumpus (lumpfish): 117730889
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Entry
117730889 CDS
T09199
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117730889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117730889
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117730889
Membrane trafficking [BR:
clum04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
117730889
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117730889
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117730889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PH_11
PH_8
BAR
Motif
Other DBs
NCBI-GeneID:
117730889
NCBI-ProteinID:
XP_034388833
Ensembl:
ENSCLMG00005003318
LinkDB
All DBs
Position
5:773081..814640
Genome browser
AA seq
857 aa
AA seq
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MTVDFEECIKDSPRFRAGVDDVETDVVEIEAKLDKLVKLCSGMIEAGRAYVSANKLFVNG
IKDLSTQCKKEEMVSECLEKCGESLQEIVNYHMILFDQAQRSIKQQLHTFIKEDVRKFKD
TKKQFDRVREDMELAQVKNAQAPRNKVHEAEEATQALVLSRKAFRHLALDYVLQINVLQA
KKKFEILDAMLSFMRAQCTLFQQGFHILDEIDPYMKRLAAQLDQLVIDSAVEKRELEHQH
AVIQQRTLMQDFSYDDHKLEFNVDAPNGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLVY
QKKLKDSLTVVVEDLRLCSVKPCEDNERRFCFEVVSPTKSCMLQAESEKLRQAWIQAVQA
SIASAYKDIADNYYIERLDRTASPSTSSIDSASEPRERADRGVRGGLESLLQRVQSLPGN
ELCCDCGQAAPCWASINLGVLLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMCELG
NTVINHIYEGSCEERGVKKPGPSSSRQEKEAWIKSKYVEKRFLKKMSGSEALVEGERKSR
PWTVKKCRRHNSSVRAPNKARRKYHRYEPGSASPANRSAAAAAKFRRDSLFCPDELDSLF
SYFDTGSGPRSPAGLSSDSGLGGSTDGSTDILVFGSVVGSVTEEEEESEESSSGEVEIEQ
EVSSDPEDPRELHPGALLHRSSRLHNLPLMAEALAHGADVHAASEEGKTPLIQAVVGGSL
IACEFLLQNGADVNQRDMRGRGPLHHATDLGHTGQVCLFLKRGASQTEVDERGHDPLSIA
VQAANADIVTLLRLARMNEEMREAEPPLGQPGDTSCVDVFREFSLLASLKPEKLRRRSVQ
FSPQSPLSSTSSDRSPP
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggactttgaagaatgtatcaaagactccccccgattcagggccggcgttgat
gacgtggagacggacgtggtggagatcgaggccaagctggacaagctggtgaagctgtgc
agcgggatgatcgaggccggccgggcctacgtcagcgccaacaagctctttgtgaacggg
atcaaggatctgtccacgcagtgcaagaaggaagagatggtctcggaatgtcttgaaaag
tgtggagaaagcctccaggagatcgtcaactaccacatgatattgttcgaccaggctcaa
aggtccatcaagcagcagcttcacaccttcattaaagaggatgtgcgtaagttcaaggac
accaagaagcagtttgaccgagtgcgtgaggacatggagctcgcccaggtgaagaacgcc
caggcacccaggaacaaggtgcacgaggcggaggaggccacgcaggccctggtcctcagc
cgcaaagccttcaggcacctggctctggactacgttctgcagattaatgtgcttcaggcc
aagaagaagtttgagatcctggatgcaatgctgtccttcatgcgcgcccagtgcactctg
ttccaacaaggctttcacatcttggatgagatcgacccgtacatgaagagactggctgca
cagctggaccagctggtcatcgactcggccgtagagaagagagagctggagcaccagcac
gccgtcatccagcagagaactctgatgcaggacttttcttatgatgaccacaagttggaa
ttcaatgtggatgcccccaatggtgtggtcatggagggctacctcttcaagagggccagc
aacgccttcaagacctggaacaggcggtggttttctatacagaacagccagctggtctac
caaaagaaactcaaggactctctgaccgtggtggtggaggacctgaggctgtgctccgtc
aaaccgtgtgaagacaatgagaggaggttctgttttgaggtggtttcccccaccaagagc
tgtatgctgcaggcggagtcagagaagctgcggcaggcctggatccaggcggtccaggcg
agcatcgcctctgcttacaaagacatcgccgacaattattacattgagcgtttggaccgg
acggcctcgccctccaccagcagcattgactcggccagcgagcccagagagagggcggat
aggggggtccggggaggcctggagagcctcctccagagggtccagagcctgccgggcaac
gagctgtgctgtgactgtggacaggcggctccgtgctgggcctccatcaacctgggagtc
ctgctgtgcatcgagtgctcggggattcacaggagtttaggagtccattgctctaaagtg
cgttcactgacgttagactcgtgggagccagagttactgaagctgatgtgtgaattgggg
aacactgtgatcaaccatatctatgagggatcctgtgaggagcgcggagtgaagaaacca
ggaccgtccagttcaagacaggagaaggaggcttggatcaagtcaaagtatgtggagaag
cgcttcctgaagaagatgagtgggagcgaggctttggtagagggggaaaggaagtcccgg
ccctggacggtgaagaagtgccggcgacacaacagctccgttcgggctcccaacaaggcc
cgaaggaaataccaccgctacgagccgggaagcgcttcacctgcaaaccgctcagcagct
gctgcagcaaagtttcgccgggactcgctgttctgtccagatgagctggactcactattt
tcctactttgacacgggctctggtcctcgcagccctgcaggtctcagcagcgacagcggc
ctgggaggaagcaccgacggcagcaccgacatcctggtcttcggctcggtggtgggcagc
gtcacagaagaagaggaggagtcagaggagtcctccagtggtgaggtggagatcgagcag
gaggtgtcttcagacccagaagacccacgggagctccaccccggggcgctcctccaccgg
tcatcccgcctccacaacctgccactcatggctgaggcgctggcgcacggtgccgacgtg
cacgctgcgagcgaggagggcaagacgccactcatccaagccgtggtcgggggttctctc
atcgcttgtgagttcctgctgcagaacggagccgatgtgaaccagagggacatgaggggc
cggggccctctgcaccacgccaccgacctgggccacacgggtcaagtgtgtctgttcctg
aagaggggggcgtcccagacggaggtggatgagcggggtcacgaccccctgagcatcgcc
gtccaggctgccaacgcagacatcgtcaccctactgcgtcttgcgcggatgaacgaggag
atgcgagaggcggagcctccgctgggtcaaccaggtgacacctcctgtgttgatgtcttt
cgcgagttttctctcctcgcgtctctcaagcccgagaagctgaggagaaggagcgtccag
ttcagcccccagtcaccactgagcagcacttcttctgaccgctctccaccatga
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