Cyclopterus lumpus (lumpfish): 117731487
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Entry
117731487 CDS
T09199
Name
(RefSeq) paxillin-like isoform X1
KO
K05760
paxillin
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04370
VEGF signaling pathway
clum04510
Focal adhesion
clum04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04370 VEGF signaling pathway
117731487
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117731487
09142 Cell motility
04810 Regulation of actin cytoskeleton
117731487
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117731487
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
LIM domain-containing proteins
Paxillin family proteins
117731487
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paxillin
LIM
GOLGA2L5
Nairovirus_NSm
Motif
Other DBs
NCBI-GeneID:
117731487
NCBI-ProteinID:
XP_034389773
Ensembl:
ENSCLMG00005017423
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Position
5:2281015..2304349
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AA seq
520 aa
AA seq
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MDDLDALLADLESTTSHISKRPLFLSDETAYSFPVGGQNQQDLCSAPQAPPAHSELNGLE
EAESLSPWSGDGASPTQPIGEEDHVYSFPNKQKNSESSAVAMNSSLGSNLSELDRLLLEL
NAVQQSTPAFPTEEEAAPPLPASSVIHHVQENGVSTSGKAAPPVLEKPKRNAGTRGIEDV
RPSVESLLDELENAVPSPTFTPLVVSDGQEETPAQQQARMSASSATRELDELMASLSDFK
VQSNIQSQGKTSPTGPPKPANKLDNMLGSLQSDLNRLGVQTVAKGVCGACKKPIVGQVVT
AMGRTWHPEHFVCTHCQEEIGSRNFFEREGQPYCEKDYHNLFSPRCHYCNGPILDRVVTA
LDKTWHPEHFFCAQCGAFFGPEGFHEKDGKAFCRKDYFDMFAPKCGGCSRAILENYISAL
NSLWHPECFVCRECFTPFINGSFFDHEGQPYCESHYHEHRGSLCSGCQKPITGRCITAMG
KKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQGCFVKLFS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttagatgctttgttggcggacctcgagtccacaacatcccacatttccaag
cgtccgctcttcctgtctgacgagaccgcctactccttccctgttgggggtcagaaccag
caagacctctgctctgcaccccaagccccgcccgcacactctgagctaaacggacttgaa
gaagcagagtccctcagcccgtggtctggagacggcgccagtccgactcagcccattggg
gaagaggaccacgtgtacagtttccctaataagcagaagaatagtgagtcatccgctgtt
gccatgaactcatccctgggcagcaacctgtctgagctggaccgcctgctgctggagctc
aacgctgtgcagcagagcacccccgccttccccacagaagaagaagcggctcccccactg
cctgccagcagcgtcatccaccacgtccaggagaacggcgtctctacgtcgggcaaggcg
gctccgcccgtgttggagaagcccaaacgcaacgccggcactcggggaatagaggacgtg
cggccgagtgtggagagcctcctggatgagctggagaacgccgtgccctcacccactttc
acgccgctggttgtgtcagacggacaagaggaaactccggctcagcagcaagcccgcatg
tcggcctcctccgccacgcgggagctggatgagctcatggcctccctgtccgactttaaa
gtccagagcaatatccagtcccaaggaaagacttcccccaccggtcccccgaaaccagcc
aacaagctggacaacatgctggggagcctgcagtctgacctcaacagactgggggtccag
acggtggccaaaggggtctgtggagcctgcaagaaacccattgttgggcaggtggtgacg
gccatgggccggacgtggcaccccgagcactttgtgtgcacccactgccaggaggagatc
ggctccaggaacttctttgagcgcgaggggcagccgtactgtgagaaggactaccacaac
ctgttctcaccgcgatgccactactgtaatggacccatcctggatagagtcgtgaccgct
ctggacaagacctggcacccagagcatttcttctgtgcccagtgcggagccttctttgga
ccagaaggtttccatgagaaggatggaaaggcgttctgcaggaaggactactttgacatg
ttcgcccctaagtgtggcggctgctcccgagccatcctggagaactacatctctgctctc
aactcactgtggcaccccgagtgcttcgtctgcagggagtgcttcacgcccttcatcaac
ggcagcttcttcgaccacgagggccagccgtactgcgagtctcactaccacgagcaccgc
ggctcgctgtgctccggctgccagaagcccatcaccggccgctgcatcaccgccatgggc
aagaagttccacccggagcactttgtgtgcgccttctgcctgaagcagctcaacaaaggc
accttcaaggagcagaacgacaagccgtactgccagggctgcttcgtgaagctcttcagc
tag
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