Cyclopterus lumpus (lumpfish): 117741169
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Entry
117741169 CDS
T09199
Symbol
snx19b
Name
(RefSeq) sorting nexin-19 isoform X1
KO
K17930
sorting nexin-19
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117741169 (snx19b)
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117741169 (snx19b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
TssC
Motif
Other DBs
NCBI-GeneID:
117741169
NCBI-ProteinID:
XP_034403886
Ensembl:
ENSCLMG00005017669
LinkDB
All DBs
Position
13:19437411..19457976
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AA seq
988 aa
AA seq
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MAVTGPWLGRWCGVAPACLNSPSVPEGVEPDGRLRGAMAEALGQRSLLGFGVVLVWLVLF
HLLVNIWLLCVFTSLLVVLGGWLGSQAVLESNSVVHLERFITLEQVLPSAEEERRLDREI
HNTVRKVIRDFVASWFSTVSSETGFETEVQEAMISMAMELKRRSRRLDRKELTQRVLDLF
GCHLQDYIRAKELASEQPERPAARWGGDGERLWRAYSAVTAPHLATTGVGARVDYTRALV
DLLLHVLVPPPHLESRTGRFVVGELITCNVLLPVVAKLSDPDWLNVLVIGILGRSRRPQE
PVATEPPPSLLRTQPSPPSSPPPPAEPELAPLQETQAPQRESEAPPLREMLSDAETPELF
AYDVIDAEEADCPQSNAEEEEPALPFLRHYVRGSKLNPFYQENDSDLDSPLGDYKRGSVD
SLVMVGQEDNNGVDPEDGFPSPADGSCPKVLVNSEPVGHSVNGNLQDPEREGSPSVSTAR
ELLLGVEQNELTVVGPLQGSSPLQTFSFEPLISPDGPVIIQNLRISGTITAKEHRGTGSH
PYTLYTIKYETMGCETPGSTQLVSEEAEVALPGGEDPSAVQQVAYHMVNRRYSEFLNLQT
RLEEKTELRRLIKGVKGPKKVFPEMPFGNMDSDKIEARKGLLEIFLKLLCAIPEIANSVE
MQEFLALNTDARIAFVKKPFIVSRIDKIVVNAIVDTLKTAFPRSEPQSPTEDNEPEVDGG
KFSCEKKSRSRLKFSSKSIPFMNGSDIRPPVSFSWEQTSTVFNGMSLGDLKAFIAEQEQL
SVRAESERVDSPGTGEFGGLPDDGSRRKNTREPASETALAEVALNILCLLMEEQWSWLCT
ENIQKTIRLLFGTFINRWLDVSVANLTSSAYWVAYLQVIQESVWPGGALPTAPRLERSRQ
QKDDTRRQALSCLMRLLPDLISDLLGSDKYKLCWQTALGSLQDPHINRHLVFCIFDLLLE
FLVPEIPEEDFQRSLLRSLSKNPEKQLA
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgactggaccctggctgggtcggtggtgtggcgtcgctccggcgtgcctgaac
tccccgtctgtccccgagggcgtggagccggacggaaggctccgcggcgccatggcggag
gccttgggccagaggagcttgttgggcttcggcgtggtgttggtctggctggtgctgttc
cacctgctggtgaacatctggctgctgtgcgtgttcaccagcctgctggtggtgctcggc
ggctggctcggctcgcaggccgtcctggagtccaacagcgtggtccacctggagaggttc
atcaccctggagcaggttctgccgtctgcggaggaggagcggcgcctggaccgggagatc
cacaacacagtgaggaaagtcatcagggactttgtggcctcgtggttctccactgtatcc
tccgagactggttttgagacggaggttcaggaggccatgatctccatggccatggagctg
aagagacgctcgagacggctcgacaggaaggagctgacccagagggtcctggatctgttc
ggctgccacctgcaggactacatccgagccaaggagctggcttcagagcagccggagcgc
ccggcggccaggtggggcggcgacggcgagcggctgtggcgggcgtattctgcggttacc
gcgccccatctcgccacgaccggcgtcggcgcgcgggtcgactacaccagggcgctcgtg
gacctgctgctgcacgtcttggtgccgccgccgcacctggagagccgcacgggccggttc
gtcgtcggcgagctcatcacctgcaacgtcctgctgccggtcgtcgccaagctgtccgac
cccgactggttgaacgttctcgtcatcggaatactcggcaggtcccgcagaccgcaggag
ccggttgcgacggagccgccgccgtcgctgctgcggacgcagccttcgccaccatcatcg
ccgccgccgcctgctgaaccggagctcgctccactgcaagagacgcaagcgcctcaaagg
gagagcgaagctcctccgctaagagaaatgctcagcgacgcggaaacgccggagctcttc
gcctacgacgtcatcgacgccgaggaggcggactgtccgcagagcaacgccgaggaagaa
gaacctgcgctgccctttctgaggcactacgtgaggggcagcaagctgaaccctttttac
caggagaacgactcggacctggactctcccctgggggactacaaacgaggctccgtcgat
tccctcgtcatggtcggacaggaggacaacaatggcgtggacccggaagacggcttcccc
agtccggcggacggctcctgccccaaagtcctggtgaattcggagccggtggggcattct
gttaacggcaacctccaggacccggagagggagggttccccctccgtgagcacagccagg
gagctccttctgggggtggaacagaatgagctgactgtggtgggcccgcttcagggctcc
tcccctctgcagaccttcagcttcgagcccctcatcagccccgacgggccggtcatcatc
cagaacctccgcatctccggcaccatcacggccaaggagcaccgcggcaccggctcacac
ccctacacgctctacaccatcaaatacgagacgatgggctgcgagacccccgggagcacc
cagctggtctccgaggaggccgaggtggccctgccggggggtgaggacccatcggccgtc
cagcaggtggcctaccacatggtcaacaggcgctacagcgagttccttaacctgcaaact
cggctggaggagaaaactgaactacggaggctcatcaaaggggtgaagggtccaaagaaa
gtatttccagagatgccgttcggaaacatggacagcgacaagatagaagccagaaaagga
ctcctggagatctttctgaagcttctctgtgccatccctgaaatcgccaacagtgtggag
atgcaggagtttctggctctcaacaccgacgccaggatcgccttcgtcaagaaacctttc
atcgtgtcacgaatagacaagatcgtggtgaacgccatcgtggacacgctgaagacggcg
ttccctcgctcggaacctcagagcccgacggaggacaacgagccggaggtggacggaggg
aaattcagttgtgaaaagaagagcaggtctcgtctgaagttctccagtaagagcatcccc
ttcatgaacggctctgacatcagacccccggtgtccttcagctgggagcaaaccagcacg
gtgtttaacgggatgtcgttgggagacttgaaagccttcatcgctgagcaggaacagctg
tccgtcagagcggagtcggagagggtcgacagtccagggacgggagagttcggaggcctt
ccggacgacggctcgaggagaaagaacacacgggaacctgcgtccgagacggcgctggcc
gaggtggcgctgaacatcctgtgtctgctgatggaggagcagtggagctggctgtgcacg
gagaacatccagaagaccatccggctgctgttcgggacgtttatcaacaggtggctggac
gtgagcgtcgccaacctgacgtccagcgcgtactgggtggcgtacctgcaggtcatccaa
gagtccgtgtggccgggaggagctctgccgacggcgccccggcttgaacgcagccggcag
cagaaggacgacaccaggcggcaagccttaagctgtctgatgagactcctgccggatctg
atctcagacctgttgggctcagacaagtacaagctctgctggcagactgcactgggctct
cttcaagacccccatattaacagacatctggtcttctgcatatttgaccttctgctggag
ttcctggttcctgaaatacccgaggaggacttccagaggagcctgttgcgaagcctctcc
aagaacccagagaagcagctggcgtga
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