Cyclopterus lumpus (lumpfish): 117741598
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Entry
117741598 CDS
T09199
Symbol
agap1
Name
(RefSeq) LOW QUALITY PROTEIN: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117741598 (agap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117741598 (agap1)
Membrane trafficking [BR:
clum04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
117741598 (agap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
PH
Ank_2
Ank_4
Ank_5
Ank
PH_6
Roc
PH_4
Ank_3
Motif
Other DBs
NCBI-GeneID:
117741598
NCBI-ProteinID:
XP_034404630
Ensembl:
ENSCLMG00005003260
LinkDB
All DBs
Position
2:complement(905853..992564)
Genome browser
AA seq
1073 aa
AA seq
DB search
MYLLDRMERGAPQRKTVYRISLTLVKRESLEEEGGGVDPRQAEDPQGGPQEVLLEEEVQV
EASHGYMRNFRTFSMGQLELGRLKLSRKLLLQKEAREKEPREKEAAGVNPTKRRLLKARS
VEERSSSPPAAATHASSSPPEAPPPKRAPGLLHRSFSFRHRPGVAGEPPSKSRTLEVGAV
LNKTGSMADLRGGGAKNRTLDNSDLVRPAAERGGGGXERRLVRFFSGIFSRRDRAASSTP
SGSPASDRPRRAVAESSTESVNGGSAEDAFVNSQEWTLSRTVPELKVGIVGNLASGKSAL
VHRYLTGTYVQEESPEGGRFKKEIVVDGQSHLLLIRDEGGPPEAQFSLWVDAVIFVFSLE
DEISFQTVYHYFSRLASFRNAAELPLVLVGTQDAISSANPRVIDDGRARKLSNDLKRCTY
YETCATYGLNVERVFQDVAQKIVATRKKQQLSIGPCKSLPNSPSHSSVCAAQVSAVHISQ
TSNGGGSLSDYSSSVPSTPSTSQKELRIDVPPPTNTPTPVRKQSKRRSNLFTSRKASEPD
KKGLEARADSIGSGRAIPIKQGMLLKRSGKTLNKEWKKKYVTLCDNGLLTYHPSLHDYMQ
NVHGKEIDLLRTTVKVPGKRPPRAVSSCTAAPSPKTNGLAKDMSSLQLGPTAGQVTSSSS
ASQMASGVSLVSFNSRGLEGMHQRSYSVSSADQWADATVIANSGVSTDTGLGDSVCSSPS
ISSTTSPKIEPPPSPHANRKKHRRKKSTSNFKADGLSGTAEEQEENFEFTIVSLTGQTWH
FEATSYEERDSWVQVIESQILASLQSCESSKHKSRLPSQTEAMALQSIRGIRGNGRCADC
EAQNPDWASLNLGALICIECSGIHRNLGTHLSRVRSLDLDEWPLELIKVMSAIGNELANS
VWEANVQGRLKPAPDASREERERWIRAKYEQRVFVAPLPPGAELSLGQQLLRAAAEEDLR
SVVLLLAHGSRQQVNETCGDGDGRNALHLASRKGNVVVTQLLIWYGVDLMARDAHGNSAM
AYARQASSQECVDTLAQYGCPDERYPLMATPNLPRRNNNRNNSCSSAGSAALM
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgctggaccggatggagaggggagcgccccagaggaagacagtgtaccggatc
tccctcaccttggtgaagagggagagcttagaggaggagggtggtggggtggacccccgg
caggccgaggacccccaggggggcccgcaggaagtcctgctggaggaggaggtgcaggtg
gaggcctcccacggctacatgaggaacttcaggactttcagcatggggcagctggagctg
gggaggctgaagctgtccaggaagctcctcctgcagaaggaggcgagggagaaggagcca
agggagaaggaggcagcaggtgtgaatccaacgaagaggaggctcctgaaagctcggagc
gtggaggagaggagctcctcgcctcccgcggcggctactcacgcctcctcctcccccccc
gaggccccgccccctaagcgagcgcccggcctcctgcaccgcagcttcagcttcaggcac
cgacccggcgtggccggcgagcccccctcaaagagcaggaccctggaggtcggcgccgtc
ctgaacaagacgggctctatggcggacctgagagggggcggggccaagaaccgcacgctg
gacaacagcgaccttgtgcggccggcggcagagaggggcgggggggggnnggagcggcgt
ctggtccggttcttcagcgggatcttctccagacgggacagggccgcctcctccacgccg
tcgggaagccccgcctctgaccggcccagaagagcggtggcggagtccagcacggagagc
gtgaacggaggaagcgctgaagatgcgttcgtgaacagtcaggagtggacgctgagtcgg
acggtaccagagctcaaagtgggcattgtgggtaacctggccagcggtaaatcagcgctg
gtccacagatacctgacggggacgtacgtccaggaggagtcgcctgaaggcggtcgcttc
aagaaggagatcgtggtggacggtcagagtcacctgctgctcatcagagatgaaggcggc
cccccagaggcccagttctccttgtgggtggacgctgtgatcttcgtgttcagcctggag
gatgagatcagcttccagacggtctatcactacttcagccgcctcgccagcttcaggaac
gctgcggagctaccgctggtactggtgggcacgcaagacgccatcagctcggccaacccc
cgggtcatcgacgacggccgagcccggaagctgtccaacgacctgaagcgctgcacctac
tacgagacctgcgccacctacgggctgaacgtggagcgcgtgttccaggacgtcgcccag
aagatcgtggccaccaggaagaagcagcagctgtccatcgggccgtgcaagtcgctgccc
aactcgccgagccactcgtccgtctgcgccgcgcaggtgtcggccgtccacatcagccag
acgagcaacgggggcggcagcttgagcgactactcgtcgtcggtgccgtcgacgccgagc
acgagccagaaggagctccgcatcgacgtgccgccgcccaccaacacacccacgcccgtc
aggaagcagtccaagcgccgctccaacctcttcacctccaggaaggccagcgagccggac
aagaagggcctggaggctcgagccgacagcatcggcagcgggcgagccatccccatcaaa
caggggatgctgctgaagagaagtgggaagacgctgaacaaggagtggaagaagaagtac
gtgacgctgtgtgacaacggactgctcacctaccaccccagcctgcatgactacatgcag
aacgtccacggcaaggagatcgacctgctgaggaccacggtcaaggtgccgggcaagagg
ccgccgcgcgccgtgtcctcctgcaccgccgccccgagtcccaagaccaacggcctggcg
aaggacatgagcagcctgcagctggggccgacggcaggtcaggtgaccagcagctcgtcg
gcgtcccagatggcgagtggtgttagcttggtgtccttcaacagccgcggccttgagggg
atgcaccagcgctcgtactccgtctccagcgccgaccagtgggccgacgccaccgtcatc
gccaactccggagtcagcacagataccggtctgggggactcggtctgctccagtcccagt
atctccagtaccaccagtcccaagatagagccgccgccatcgccgcacgccaaccgcaag
aagcaccgccggaagaagagcaccagcaacttcaaggctgacggcctctctggtactgcg
gaagaacaagaggagaactttgagttcaccattgtgtctctgacggggcagacgtggcac
ttcgaggccacttcctacgaggagcgggactcctgggtccaggtcatcgagagccagatc
ctggccagcctgcagtcctgcgagagcagcaagcacaagtctcgcctgccgagccagacc
gaggccatggccctgcagtccatcagggggatccggggcaacggccgctgtgccgactgt
gaagctcagaaccccgactgggccagcctcaacctgggggccctgatctgcatcgagtgc
tcagggatccacaggaacctgggcacccacctgtcccgggtccggtccctggacctggac
gagtggcccctggagctcatcaaggtgatgtcggccatcggcaacgagctcgccaacagc
gtgtgggaggccaacgtccagggccgcctgaagccggccccggacgccagcagggaggag
cgggagcgctggatccgggccaagtacgagcagcgcgtgttcgtggcgccgctgccgccc
ggcgccgagctctccctggggcagcagctgctgcgggcggcggcggaggaggacctgcgc
tccgtggtgctgctgcttgctcacgggtcgaggcagcaggtcaacgagacgtgcggtgac
ggagacggacgcaacgcgctgcacctcgccagccgcaagggcaacgtggtcgtcacgcag
ctcctcatctggtacggcgtggacctgatggcgagagacgcccacgggaacagcgccatg
gcgtacgcccggcaggccagcagccaggagtgtgtggacacgctggcgcagtacggctgc
cccgacgagcgctacccgctcatggccacgcccaacctgccgcgccgcaacaacaaccgc
aacaacagctgcagcagcgccggcagcgccgcgctcatgtga
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