Cyclopterus lumpus (lumpfish): 117745510
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Entry
117745510 CDS
T09199
Name
(RefSeq) methyl-CpG-binding domain protein 5-like
KO
K23219
methyl-CpG-binding domain protein 5
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117745510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117745510
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
117745510
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
117745510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
MBD
Motif
Other DBs
NCBI-GeneID:
117745510
NCBI-ProteinID:
XP_034409792
LinkDB
All DBs
Position
2:2421804..2442915
Genome browser
AA seq
1427 aa
AA seq
DB search
MNGGKDYEAGDERQAYPVQVPIGWQRKPEHRGGVVYISPSGSVLSSLEQVKIYLLTDGTC
KCGLECPLILHKVFNFDPGAAVKQRTAEDVKADDDVTKLCIHKRKLLAVATLHRSMGTHP
PLTLTSRRGGTSSVVVAHSTSQRAIRTKPHDGLPNAVGPDCKNPFKMMMAAGQQQQQQQR
LYPPQEMGGAQQLDLYSGYPRTHRLSSGEPGPKSPYRVGYGGMLSPPPSSAKLYGDGSQS
PSADTLGSPDCFPRTNHCGFPGAGSPGSASIHGNTRTSLSPHSLMLHGSPVGQPSCAMTG
RTSTPLSPTATAKSPVMNMPRGSFPPGMDMSRATFHHKTQAPVHPIPPPPSIPPSCALQK
RQLTYEKDPLGILDPIPSKLVSQPPINAPNPSNFQPNIHSQVQMMNVNIPPPVIVPLPSN
LPLPTVKPGPVGHVSHVQRTQQGGPASSMSPSPVTSPVHMAGPVLGRIEASPHRSRSSST
SSDHGNFAMPSGHQAPCGNMKVPPRSPRSAIGSPRPSMPSSPSTNKTDPQHQYKDSQMLP
GMGNSIGAQQHNPMYSPTSSSSSSSSLATPCASQKGHPGLLGMPLNQILNQQNAASFPAS
SLLSAAAKAQLANQNKLSPAGMGGVGGGNGGGGGHPGSMSGPRGMEGHSTLNSMLPPNST
MLLNTPEGQSGRAALRDKLMAQQRDPMRKRKQSSGSAAVNHDNSNNMVYNMLNKRGMGGP
HIAGPSATEQLRKVGRLGNLTPNTSMAQLLQSMSCQSSHNHRPGLSPGPGPQGSAQMHYN
DSTGMVPAGPQQNLLAQQRLRGPGDAMQHCQNMDTSGGHLGSRPGQFPDIIAQMQASSMS
NCGPMGPGGGPVGPDGMPLGRPHTNPPPLSHPGPHPSQQNLLHGMGRTTMVVMPHGGGDG
SCPQTISDSGNPSSHGCGMGGLQPHINTGVGQMYQQQVHQGMQQGVASHPAYQAQQHFSV
NPPYTDRNNGGSMACLYQNYQPGMLSHPQFREEQQPQGEGLPAGAPGGDRGPGGGPESVD
AIYRAVVDAASKGMHVTITTTVSGTTQSSPVPALSAMSAFTTSIGEPVNLPQAVSTVLHR
HQDGEVLPQQVRSRQVGPGRGQKNMDLGKRTPDGPEANDYFRSPGRGTPRGQWDGETQHG
FDAHGNNSAWGGEEFLECSTQVRSSPCMERPSSLAPTPPCPTEGSNDHGLVMAHDKAFLD
DGYRFNNCHRTPANYKERLEQTVERCVHINGATPHFNTRGYGEVLGPPRQELTGDDQSPS
SSTSLEGPLATAKDYSHYNGHFNGMAPSPSDTKSLSSEEDLRQPDSPSSELLHYRSRTFN
MGELVWGQLKGFPPWPAKLAGDEQVHSAAMQLREQAKVEPEKLKTLTHDLEALDRAAKRG
LKPGKLNNHLEAAIHEAMSELDKMSGTIPSRDRQGKLPKPKRRKISR
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaggaaaggactatgaggcgggagatgagaggcaggcctaccctgtccaggtc
cccattggctggcagcgcaagccggagcaccgcggcggggtcgtatacataagtcccagt
ggctcggtgctgtccagcttggagcaggtgaaaatctacctgctgacagatggaacctgc
aaatgcggcctggagtgccctctcatcctccacaaggtgtttaacttcgacccaggggca
gctgtcaagcagaggacagcggaggatgtgaaagcagatgacgacgtcaccaaactctgc
attcacaagaggaagcttctggcggtggccacgttgcacaggagtatggggacgcacccg
cctctgacgctcacaagtcgaaggggaggtacatcatctgtggtcgttgcgcattccacg
tctcaacgagcaataaggactaaaccccacgatggcttgcccaatgctgttggcccagac
tgcaagaatcctttcaagatgatgatggcagccggacaacagcagcagcaacagcagagg
ttgtatccaccccaggagatgggtggagcccagcagcttgacctctactcgggatacccc
aggacgcataggttgagcagtggggagccaggacccaaatccccttaccgggttgggtat
ggaggcatgctcagcccacctccctccagtgctaaactgtatggagatggctcacagtct
cccagtgcagacactctgggcagccctgattgctttccaaggaccaatcattgtgggttt
ccaggagctggtagtcctggctcagcctccatccatgggaacactaggacgtctctttcc
ccacacagtttaatgctccatggctcccctgtgggccagccatcttgcgccatgacaggg
aggactagcacgcccctctcccctacggccactgccaaaagtcctgtcatgaacatgcct
cgggggagcttccctcctggtatggatatgtctcgcgcaacatttcaccataaaacacag
gcccctgtgcatcccataccgcctcctccatccataccaccatcctgtgcacttcagaaa
aggcagttgacctatgaaaaagaccccttaggcatcctggaccccatccccagcaagcta
gtcagccagccccccattaacgccccaaacccctccaacttccagcccaatatccactct
caggtacaaatgatgaatgtaaacataccccctcctgtcatcgttcccttgccaagcaac
ttacctttacccacagtgaagcctgggcctgtggggcatgtcagccatgttcaaaggact
caacagggtggtccggcttcctccatgtccccctcccctgtcacttcgcctgtccacatg
gcaggacctgtccttggcagaattgaggcctctcctcatcgttcacggtcatcctccacc
tcctctgaccatgggaactttgcaatgccctcaggccaccaggccccatgtggaaacatg
aaggttcctcctcgttctcccaggtccgcaataggatctcccaggccttccatgccctct
agcccctccaccaacaaaactgacccacaacaccaatacaaagactcccagatgctgccc
ggtatgggaaactcgattggcgcccagcagcacaaccccatgtactcgcccacttcttcc
tcctcgtcatcttcttctctggcaaccccttgcgcttcccagaagggccatccaggactc
ctggggatgcccctcaaccagattctcaaccaacagaatgctgcttctttcccggccagc
agtctcttgtcagccgcagccaaagcacagctagcaaatcaaaacaaactcagccctgct
ggcatgggtggtgttggtggaggtaatggaggaggtggcggacatcctggctctatgagc
ggccctcgaggcatggagggacacagcactttaaactcaatgctcccgccaaactccacc
atgctgctcaacactcctgagggccagagtggtcgggcagctcttcgagacaagctcatg
gctcaacagagggaccccatgcgcaaacggaagcagtcatcaggcagcgcggctgtaaac
cacgacaatagtaacaacatggtctacaacatgcttaacaaacgaggcatgggaggaccc
cacatagcggggcccagtgccactgagcagcttcgaaaagtgggcagacttggaaacctt
accccaaacacctctatggcccagcttctccagtccatgagctgccagagctcccacaac
catcgcccaggtcttagccctggcccagggcctcaaggatctgcacagatgcactacaac
gacagcactggtatggttcctgctggccctcagcagaacctcctagctcagcagaggctt
aggggtccaggggatgccatgcagcactgccagaacatggacacctctgggggccatctg
ggctctcgtccaggccagttccctgacataatagcccagatgcaggcctcttccatgagt
aactgtgggcctatggggccaggaggtggacctgtgggccccgatggcatgccgctggga
cgcccccacactaaccccccaccactgtcccatcccggccctcacccctcacagcagaac
ctccttcacggtatgggtcggactaccatggtggtgatgccacatggaggtggtgatgga
agctgtccacagaccatctctgattcgggaaacccgtcatcccatggctgtggtatgggc
ggcctgcagccacacatcaacaccggtgtgggtcagatgtaccagcagcaggtccaccag
ggcatgcagcagggggtggcctcccacccagcctaccaggcacagcagcacttctctgtc
aacccgccctatacagacagaaacaacggcggctccatggcctgcctctaccagaactac
cagccggggatgttgtctcacccgcagttcagggaggagcagcagccccaaggcgaaggg
cttccggcgggtgcacccggcggggacaggggcccgggtggaggcccggagtcggtggac
gccatctacagagccgtggtggacgccgctagcaagggcatgcatgtaaccataaccacc
acagtgagcgggaccacacagtcgagtccggtgcctgccctcagtgccatgagtgccttc
actacttctataggggagccggtcaacctcccccaagcagttagcacagtccttcacagg
caccaggacggagaggtattaccccagcaagtcaggtcgaggcaggtggggccgggtcgg
ggtcagaagaacatggatctagggaaaagaactccagacggccccgaggccaatgactac
ttccgttctcctggccgtgggactcccagggggcagtgggacggggagacgcagcacggc
ttcgacgctcacggcaacaacagcgcctggggtggcgaggagtttctggagtgctctacc
caagtgaggagtagtccctgcatggagcgccccagcagcctggcccccaccccgccctgc
cccactgaggggtccaacgaccacggcctggtcatggctcacgataaggcctttctcgac
gacggctatcgcttcaataactgccaccgaacgcctgctaactacaaggagcgtctggag
cagacggtggagcgctgcgtccacatcaacggcgccactccccacttcaacacccggggt
tacggggaagtactgggccccccgcggcaagagctgactggggacgaccagtcgcccagc
tcctccaccagcctggagggacctctggccacagccaaagactacagccactacaacggc
cacttcaacggtatggcgcccagcccctcggacactaagagcctaagcagcgaggaggac
ctgcggcaaccggactctccttcttcagagctgcttcactaccggtccaggaccttcaac
atgggagagctggtctggggccagctgaagggcttcccaccttggcctgccaagctggcc
ggggacgaacaagtgcacagtgctgctatgcagctgcgggagcaggccaaggtggagcca
gagaagctaaaaacattgactcacgacttggaggctctcgaccgagccgccaaaagaggc
ctgaaaccggggaaactgaataatcacttggaagctgctatccacgaggccatgagtgag
ctggacaagatgtcgggcaccatcccatcgagggatcgtcaggggaagctacccaagccc
aagaggaggaagatatccagataa
DBGET
integrated database retrieval system
