Cyclopterus lumpus (lumpfish): 117746420
Help
Entry
117746420 CDS
T09199
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04510
Focal adhesion
clum04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117746420 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117746420 (lamc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
Alanine_zipper
DUF6061
Death
Sec63
Motif
Other DBs
NCBI-GeneID:
117746420
NCBI-ProteinID:
XP_034411416
Ensembl:
ENSCLMG00005012579
LinkDB
All DBs
Position
17:complement(22716360..22763162)
Genome browser
AA seq
1593 aa
AA seq
DB search
MRVLIRALVAWSWVALCARAAMDECSDEQERAQRCMPEFVNAAFNVTVVATNTCGAPPEE
YCVQTGATGVTKSCHICDARDPRNHHSAVYLTDYNNQQDTTWWQSQTMLAGVQYPNAINL
TLHLGKSFDITYVRLKFHTSRPESFAIYKRTSEAGPWVPYQYYSGSCEKTYRKPGRGFIR
TGEDEQQALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNSRGRLVCNCKHNTDGDD
CNVCKPFYNDRPWRRSSADSSNDCLPCDCNGKSSECFFDAELYRASGHGGHCTNCADSTD
GPNCERCLDHYHREAGGSRCLPCSCNTVGSESPQCDNRGVCACKPGVTGEKCDRCQSGFH
SLTEAGCRPCSCSPSGSTQECDVNTGQCRCKDNVEGFSCDRCKLGFFNLDPSNPQGCTAC
FCFQHSSVCDSAEGFSVHAVRSSFSRDDEQWTGQQRDGSSVSVQWSPSGQEVSLISDDYF
PMYFVAPEKFLGNQMLSYGQNLSLSFRVARRDTRLSAEDLVLEGAGLRVAVPLIAQGNAY
PNENMQTYVFRLHDSTDYPWRPTISHPDFQKLLHNLTAIKIRGTYSEKSAGYLDDVSLVT
ARRAPGVPAHWVERCTCPQGYQGQHCEQCTLGYRRARPELGAFSPCEPCNCNGHSEACNP
ATGACDCRDNTAGLSCERCKDGFYGDATRGSSDCEPCPCPAGATCAVVPSTREVVCTNCP
TGTTGKRCELCDDGFFGDPLGQSGPVRSCRACKCSDNIDPNAVGNCDRETGECLKCIYNT
DGFFCDRCKDGFYGNAMAGSAADKCNACSCSAFGTVGRQTGCSQVTGQCECLPNVAERDC
GACQPGFFNLQSASGCERCNCNPIGSTNGQCDITSGQCECQPGVTGTHCERCEVNFFGFS
SSGCKPCDCDLEGSRAAQCEDDGRCACARGFVGARCDTCEENFFYNRSAPGCQLCPSCYS
LVRDKVNQQRQKLQDLQTLIDQLGSGHDTVSDQAFEDRLKEAEKAIMELLEEARASKDVD
RGLLDRLSGINNTLTTQWNRLQGIRNTVDATGTQADRARHRVRDAEDLMDRARQELDKAK
DAVGKVDIKPPSGTGDPNNMTLLAEEARTLADKHKMDADQIEKIAKDANDTSTKAHNLLL
KTLEGESKTSQEIDELNKKYNEAKELAKNLEKQANKVQAEAEDAGNKAVKIFANLTSVPP
VDTKALEDEASKIKKEASDLDKLIDKTEKEYNDLRDDLRGKEQEVRKLLEKGRSEQQTAD
QLLARADAAKALAEEAAKKGQSTFKEAESILEDLRDFDKRVNDNKTAAEDALKKIPAINA
TIMAANQKTKQAEAALGNAAADAREAKSKAEEAEKIAGNVQKGSAKTKEDAEKAFQDTNT
LDNDVGDMMDQLDAAEQELLRKKAEADRDMMMAGMASENAKEAEDNARKAKSAVKTVLTT
ITVLLDQLGHIDKVDLSKLNQIDESLKRAKGKMGDSDLDRKLTELNDVARTQEDMINDYD
RQIREIRADIANLNDIKNTLPEGCFNTPSLERP
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgctgatccgggctctggtggcctggagctgggtggcgctgtgcgcgcgcgcg
gccatggacgagtgctcggacgagcaggagcgcgcgcagcgctgcatgccggagttcgtg
aacgccgcctttaacgtcacggtggtggcgaccaacacctgcggggccccgccggaggag
tactgcgtgcagaccggcgccaccggggtcaccaagtcctgccacatctgcgacgcccgg
gacccccggaaccaccacagcgccgtgtacctgaccgactacaacaaccagcaggacacc
acctggtggcagagccagaccatgctggccggggtccagtaccccaacgccatcaacctc
accctgcacctcggtaaatccttcgacatcacctacgtgaggctcaagttccacaccagc
cgcccggagagcttcgccatctacaagcggaccagcgaggcgggcccctgggtgccctac
cagtactacagcggctcctgtgagaagacgtaccgcaagccgggccgcggcttcatccgc
accggagaggacgagcagcaggcgctctgcaccgacgacttcagcgacatctcgccgctc
accggggggaacgtggccttctccacgctggagggccggcccagcgcctacaacttcgac
aacagccccgtcctccaggactgggtgacggccaccgacatcagagtgaccctgaaccgg
ctcaacacgttcggagacgaggtcttcaacgaccccaaggtcctcaagtcctactactac
gccatctctgacttcgctgtggggggaaggtgtaagtgtaacggccatgccagcgagtgt
gtgaagaacagcagaggacggctggtgtgcaactgcaaacacaacacggacggcgacgac
tgcaacgtctgcaaaccgttctacaacgaccggccgtggaggaggtcgagcgccgacagc
tccaacgactgtctgccctgcgactgtaacgggaagagctccgagtgtttcttcgatgcc
gagctgtaccgggcctcaggtcacgggggtcactgcaccaactgcgccgacagcacggac
gggccgaactgtgagcgctgcctggaccactaccaccgggaggccggcggcagccgctgc
ctgccctgcagctgcaacaccgtcggctcggagtctcctcagtgtgacaacagaggagtg
tgtgcgtgtaaacccggcgtgaccggagagaagtgtgaccgctgccagtcggggttccac
agtctgacggaggccggctgcaggccgtgttcctgttcgccctctggcagcactcaggag
tgtgacgtgaacacaggacagtgtcgctgcaaagacaatgtggagggcttcagctgcgac
aggtgtaaactgggcttcttcaacctggaccccagcaaccctcagggctgcaccgcctgc
ttctgcttccagcactcgtccgtgtgcgacagcgccgaaggcttcagcgtccacgccgtc
cgctcgtccttctccagagatgatgagcagtggaccggtcagcagcgcgatggttccagt
gtctccgtccagtggtctcccagtggacaggaagtgtccctcatctcagacgactacttt
cccatgtacttcgtagccccagagaagtttttggggaaccagatgctgagctatggacag
aacctgagtctgagtttccgggtcgcccggcgggacacccggctgtcggcggaggatctg
gtcctggagggagccggcctcagggtggcggtccccctcatcgctcagggcaacgcctac
cccaacgagaacatgcagacatacgtgttcaggctccatgacagcacagactacccctgg
aggccgaccatcagccacccagacttccagaaactcctccacaacctgaccgccatcaag
atccgtggcacctacagcgagaagagtgccggttaccttgacgacgtctccttggtaaca
gcgaggcgggctccaggtgtgccggcccactgggtggagcgctgcacttgtcctcagggt
taccaggggcaacactgtgagcagtgcactctgggatatcgacgtgcccgtccggagctc
ggggccttcagcccctgtgagccctgcaactgtaacggacacagcgaggcctgcaacccc
gccactggagcgtgcgactgtcgggacaacacggccggtctcagctgtgagcgctgtaaa
gacggtttctatggcgatgccacccgcgggtcgtctgactgtgagccttgtccctgtccg
gccggagccacatgcgccgtcgtgccctctaccagagaggtggtctgcaccaactgtccc
acaggaaccacagggaagcgctgcgagctctgtgacgacggcttcttcggcgacccgctg
ggtcagagcgggccggtccgatcctgccgcgcctgcaagtgcagcgacaacatcgacccg
aacgccgtcgggaactgcgaccgcgagaccggagagtgcctcaagtgcatctacaacacc
gacggcttcttctgcgaccgctgcaaggacggtttctacggcaacgccatggccggcagc
gccgccgacaagtgcaacgcctgttcctgctctgcgttcggtacggtgggtcgacagacc
ggctgctctcaggtcaccggtcagtgtgagtgtctgcccaacgtggcggagcgtgactgc
ggcgcctgccagcccggcttcttcaacctgcagagcgccagcggctgtgaacggtgcaac
tgcaatccgattggctccaccaacggccagtgtgacatcacgtcggggcagtgcgagtgt
cagcccggcgtcaccggcacacactgcgagcgctgcgaggtcaacttcttcggcttcagc
tcgtcgggatgcaaaccctgtgactgtgaccttgagggctcccgggccgctcagtgtgag
gatgacggtcgctgtgcgtgcgctcgcggcttcgtgggcgcacgctgtgacacgtgtgaa
gagaacttcttctacaaccgctcggcccccggctgccagctgtgcccgtcctgctacagc
ctggtccgggacaaggtgaaccagcagaggcagaagctccaggacctgcagaccctgatc
gaccagctgggctcgggtcacgacaccgtcagcgaccaggccttcgaggaccggctgaag
gaggccgagaaggccatcatggagctgctggaggaggctcgggccagcaaagacgtggac
cgtggtctgctggaccgcctgagcggcatcaacaacactctgacgacgcagtggaaccgg
ctgcagggcattcgcaacacggtggacgccaccggcacgcaggccgaccgcgcacgccac
cgagtccgggacgccgaggacctgatggaccgcgcccgccaggagctggacaaggccaag
gacgccgtcggcaaagtggacatcaaacccccgagcggcaccggagatcccaacaacatg
acgctgctggcggaggaggctcgaacgctggctgacaagcacaagatggacgccgaccag
atcgagaagatcgccaaagacgccaacgacacgtcgaccaaagcgcacaacctgctgctg
aagactctggaaggagagagcaagacgagccaggagatcgacgagctcaacaagaagtac
aacgaggccaaggagctggccaagaacctggagaaacaggccaacaaggttcaggcggag
gccgaagacgccggaaacaaagctgtgaagatcttcgccaacctgacgagcgtcccgccg
gtcgacaccaaagccctggaggacgaagccagtaagatcaagaaggaggcgtcggacctc
gacaagctcatcgacaagacggagaaggagtacaacgacctgagagacgacctgaggggc
aaagagcaggaggtccgcaagctgctggaaaaggggaggagtgagcagcagaccgctgat
cagctattggctcgagccgacgctgccaaagctctggctgaggaggcggcgaagaaggga
cagtccacctttaaagaggccgagagcatcctggaggaccttcgggacttcgacaagaga
gtcaacgacaacaagacggcggccgaagacgcgctgaagaagatccccgccatcaacgcc
accatcatggccgccaaccagaagaccaagcaggcggaagcggcgctcggcaacgcggcc
gctgacgcccgagaggccaagagcaaggcggaggaggccgagaagatcgcgggcaacgtg
cagaagggctcagccaagaccaaggaggacgcagagaaggccttccaggacaccaacacg
ctggacaacgatgtgggcgacatgatggaccagctggacgccgcggagcaggagctgctc
aggaagaaggccgaggccgaccgcgacatgatgatggctggaatggcgtcggagaacgcc
aaggaggccgaggacaacgcccgcaaggccaagagcgccgtgaagacggtgctgaccacc
atcaccgtgctgctggatcagctgggacacattgacaaagtggacctgagcaaactgaac
cagatcgacgagtccctgaagagggccaagggcaagatgggggacagcgacctggaccgg
aagctgacggagctgaacgacgtggcgcggactcaggaggacatgatcaacgactacgac
cggcagatccgcgagatccgcgccgacatcgccaacctcaacgacatcaagaacacgcta
cccgaaggctgcttcaacacgccgtctctggagcgcccttag
DBGET
integrated database retrieval system
