Cyclopterus lumpus (lumpfish): 117747519
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Entry
117747519 CDS
T09199
Symbol
si:dkey-46i9.6
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM7
Organism
clum
Cyclopterus lumpus (lumpfish)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
SDR-like
DUF6399
Motif
Other DBs
NCBI-GeneID:
117747519
NCBI-ProteinID:
XP_034412710
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Position
18:2451781..2454969
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AA seq
651 aa
AA seq
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MTLPLRRAGMASTGNLSEEQVHCSICLDVFTNPVSIPCGHNFCQCCILGYWKTSPLYQCP
MCKKTFCKRPDISINTVLREIAEQFKEIRVRSEEEEEEEDGERKWTMERRKKEDEEWLLE
KDQKKHLLEELKQKQEEEERRRREKRPPAEELPPLIPPGSAPKASPPPTPRAAAREPPPP
PSPQLAASSSPQTSPPPPSWEEVLCDVCLGGDGRPKAVKSCLVCLTSYCEEHLRSHAARF
TKHKLIEPVANMEERMCPKHERLLELFCKKDQTCVCVLCTETDHRAHYTVPVEREWMEKK
AQLKRTEIDVQQMIRDRVKKVEEIKHSVEQNKASAHREVEESTRVVSELVRSIQKTQAQL
VLALEEKQRQTERWAEGLVAELEREVAALKTRNADLENVARTDHIHFLKRFPALCTPPSV
KDWSETSVPTDVCVGMIRRSMSKLDATLHEMIGKLAESEIKKILKYTVDVTLDPDSANPW
LQLSQDRHQVRHLGAWQDLPDRPERFDTVVIVLGRDGFASGRHYWEVQVGDKDDWYMGVA
NSSVNRKGRISVSTAQGYWALAMKKGQGYRASTSPPVLLPLDPKPKRVGVYVDYEEGQVS
FYDVKALTHIYTFKDTFTEKILPFFYLYCCDKASDTIVICPVNEKSPIKQS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgcctctccgccgtgcaggaatggcctccaccgggaacctctccgaagagcag
gtgcactgctccatctgtctggacgtgttcaccaaccccgtgtccatcccctgcggacac
aacttctgccagtgctgcatcctgggatactggaaaaccagcccgctgtaccagtgcccc
atgtgcaagaagaccttctgcaagaggcccgacatcagcatcaacacggtgctgagggag
atagccgagcagttcaaggagatccgggtcaggagcgaggaggaggaggaggaggaggac
ggtgagaggaagtggacgatggagaggaggaaaaaggaggacgaggagtggcttttggag
aaagatcagaagaagcatcttctggaggagctgaagcagaagcaagaggaggaggagagg
aggaggagagagaaaaggcctccggcggaggagttaccgcctctgatcccccccgggtcg
gcccccaaagcctctcctcctccaacgccgcgagccgcggcccgggagccgcctccccca
ccttcacctcaactcgccgcgtcttcatctccccaaacctcgccgccgcctccctcctgg
gaggaggtcctgtgtgacgtctgcctggggggcgacggcaggccgaaggcggtgaagtcc
tgcctggtgtgcctcacctcgtactgcgaggagcacctgaggtcgcacgccgccaggttc
accaagcacaagctgatagagcccgtggccaacatggaggagcgcatgtgtcccaagcac
gagcggctgctggagctgttctgcaagaaggaccagacgtgcgtgtgcgtgctgtgcacg
gagacggaccaccgggcgcactacaccgtgcccgtggagagggagtggatggagaagaag
gcgcagctgaagaggacggagatagacgtccagcagatgatccgggaccgagtgaaaaag
gtggaggagatcaaacactcggtggagcaaaacaaagccagcgctcacagggaggtggag
gagagcacgcgggtggtgtcggagctggtgcgctccatccagaagactcaggcccagctg
gttttggccctggaggagaagcagcggcagacggagcgctgggccgagggcctcgtggcc
gagctggagcgcgaggtcgcggcgctgaagacgaggaacgccgacttggagaacgtggct
cggaccgaccacatccacttcctgaagagattcccggccctttgcactcccccatctgtc
aaagactggtctgagaccagcgttcccactgacgtatgtgtcggcatgatcaggaggtcc
atgtccaaactggacgccacgcttcacgagatgatcggcaaactggccgaaagcgagatc
aagaagattctgaaatatacagtggacgtcactctggacccggactcggccaacccctgg
ttgcagctttcccaggaccggcaccaggtgagacacctgggcgcgtggcaggacctcccg
gaccgccccgagcgcttcgacacggtggtcatcgtcctgggacgcgacggcttcgcctcg
gggagacactactgggaggtccaggtcggggacaaggacgactggtacatgggcgtggcc
aattccagcgtcaacagaaaggggcggatctccgtgagcaccgcgcagggctactgggct
ctggccatgaagaaaggccagggctaccgggcgtccacgtccccgcccgtgctcctcccc
ctcgaccccaagcccaagcgagtgggcgtgtacgtggactacgaggaggggcaagtgtcc
ttctacgacgtgaaggccctcacccacatctacaccttcaaggacacgttcacggagaag
atcttgccctttttctacctgtactgctgcgacaaggcctccgacaccatcgtgatctgc
ccggtgaatgagaaaagtcccatcaagcaaagctaa
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