Cyclopterus lumpus (lumpfish): 117749290
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Entry
117749290 CDS
T09199
Symbol
asap1b
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117749290 (asap1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117749290 (asap1b)
Membrane trafficking [BR:
clum04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
117749290 (asap1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
BAR_3
PH
Ank_2
Ank
BAR
SH3_9
SH3_1
Ank_4
SH3_2
Ank_3
A2L_zn_ribbon
DUF4404
Motif
Other DBs
NCBI-GeneID:
117749290
NCBI-ProteinID:
XP_034415484
Ensembl:
ENSCLMG00005014493
LinkDB
All DBs
Position
20:5873650..5922592
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AA seq
1168 aa
AA seq
DB search
MPDQISVSEFLSETTEDYNSPTTSSFTTRLQSCRNTVNVLEEGLDQDRTSLQKVKKSVKA
IYNSGQDHVQNEENYAQALDKFGSNFISRDNPDLGTAFVKFSSLTKELSALLKNLLQSLS
HNVIFTLDSLLKGDLKGVKGDIKKPFDKAWKDYEAKFTKIEKEKREHAKQHGMIRTEITG
AEIAEEMEKERRLFQLQMCEYLIKVNEIKTKKGVDLLQNLIKYYHAQCNFFQDGLKTADK
LKQYIEKLAADLYNIKQTQDEEKKQLTALRDLIKSSLQLDQKEDSQSKQGGYSMHQLQGN
KEFGCEKKGYLLKKSDGLRKVWQRRQCSVKGGMLTISHATSNRQPVKLNLLTCQVKPSSE
DRKCFDLISHNRTYHFQAEDEQEFVIWISVLTNSKEEALNMAFRGEQSGGGEDGLEDLTK
AIIEDVLRMPGNEVCCDCGASDPKWLSTNLGILTCIECSGIHREMGVHISRIQSMELDKL
GTSELLLAKNVGNSSFNEIMEGNLTSPSPKPTPSSDMTVRKEFINAKYVDHKYARKTCTS
ASAKMIDLFEAVQSRDLLSLIQVYAEGVELMEPLPEVGPESGETALHYSVRTADQTSLHL
VDFLVQNSGNLDKQTEWGNTALHYCSMYEKPECLKLLLRGKPATDISESLPHINVCAHVS
RLLTVDRPSSLPSANQNGETALDVARRLRNPQCEEALVQAAEGKFNPHIHVEYEWSLRLE
EMDESDDDLDDKPSPIKKDRSPRPQSFCHSSSLSPHDKLSLPGFISQRDKQQRLSYSAFT
NQMYSASTDLTSSPVADGPPLPPRNQGKAPPPSGPPSTLTPGGSSTLSKKRPPPPPPGHK
RTLSDPPSPLSHSPHSKGGLTGGSDSTPPPVSKMSPVSNKFEGIPQQQSTTSSNTKSTLG
PRVLPKLPQKVALRKIDTIHPSMDKPSLPPEVFQKSPPATEPPQKAPLADRPQPGDLPPK
PQPSELPPKPGELPPKPQLSDLPPKPQLGDLPPKPQLKDLPPKPHLADIPPKPGPAESSS
RPHETVQRPQTQPPPPPQSHPQPQPQPQPQPQPPDSPSPSQQANIGTPAPPAAEDTNGTP
AGTAETPVPLPRKINTIGYLNVQGKSKTRRVKTIYDCQADNDDELTFVEGEVIIVTGEED
QEWWIGHIEGEPDRKGVFPMSFVHILSD
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgccggatcaaatatcggtgtccgagtttctctcggagacgacagaggattacaattcc
ccgacaacatccagcttcaccacccgactgcagagctgcaggaacacagtgaacgtgctg
gaggaggggctggaccaggaccgaacgtccctgcagaaagtgaagaagtccgtgaaggcc
atctacaattcaggacaagaccacgtccagaatgaagagaactacgctcaggctctggac
aaatttggcagcaacttcatcagccgggacaaccccgacctgggaacggcttttgtcaag
ttctcctccctcaccaaggagctgtctgcgctgctgaagaacctgctccagagcctcagc
cacaatgtgatcttcaccctggactcgctgttgaagggagatttgaaaggcgtgaaaggg
gacataaagaagcccttcgacaaagcatggaaggactacgaggccaagtttacaaagatc
gagaaggagaagcgagagcacgccaagcaacacggaatgatccgcactgagatcaccggg
gctgaaatcgccgaggagatggagaaggagaggcgtctctttcagctccagatgtgcgag
tacctgatcaaagtaaatgagatcaagaccaagaaaggagtggacctcctccagaacctg
attaagtattaccacgcacagtgcaatttcttccaagatggcttgaagacagccgataag
ctgaagcagtacatcgagaagctcgcagcggatctctacaatatcaaacaaactcaggat
gaggagaagaagcagctgactgccctgcgggatctgatcaagtcctccctccagctggac
cagaaggaggactcgcagagtaagcaggggggctacagcatgcaccagctgcaggggaac
aaggagtttggctgtgagaagaaaggctacctgctgaagaagagtgatgggctgaggaag
gtgtggcagaggaggcagtgctcagtgaaggggggcatgctcaccatctctcatgccaca
tccaacaggcagccggtcaaactcaacctgctcacctgccaggtcaagcccagttctgag
gacaggaagtgcttcgatctcatttcccataaccggacatatcatttccaagctgaagat
gaacaggagtttgtcatctggatctcggtgctgaccaacagtaaggaggaggccctgaac
atggcgtttcgtggcgagcagagcggcggcggcgaggacggtttagaggatctgactaaa
gccatcatagaagacgtgctgcgcatgccgggcaacgaggtctgctgcgactgcggagcc
tcagatcctaagtggctgtccaccaacctggggatcctgacctgcatcgagtgctctggc
atccaccgcgagatgggagtccacatctcgcgcatccagtccatggagctcgacaagcta
ggaacttcagaactcttgctggccaagaatgtaggcaacagtagtttcaatgagatcatg
gagggaaacctcacgtccccttcaccaaagcccactccatccagtgacatgactgtgagg
aaggagttcatcaacgctaagtatgtggaccacaagtatgctaggaagacgtgcacgtct
gcgtcagcgaagatgatcgacctgtttgaggcggttcagtccagggatctgctgtccctc
atccaggtctatgcagagggggttgaactgatggagccgctcccagaggttggaccggaa
tccggagagacggcactgcactactctgtacggactgctgaccagacctctctgcacttg
gtggacttccttgtgcagaacagcggtaacctggataagcagacggagtgggggaacacg
gcccttcattactgcagcatgtacgagaagcccgagtgcctcaagttgctcctgaggggc
aagccggccactgatatcagtgagtcacttcctcacattaatgtctgtgcgcacgtatcc
agactgctaactgttgatcgtccatcctctctcccttcagccaatcagaacggagagacg
gcgctggatgttgccaggcgactgaggaaccctcagtgtgaggaggcactggtgcaggct
gcagaggggaagttcaacccccacatccatgtggagtacgagtggagcctcagactggag
gagatggacgagagcgacgacgacctcgacgataagcccagtcccatcaagaaggaccgc
tccccgaggcctcagagcttctgccactcctccagcctctctccccatgacaagctctcc
ctgccgggcttcatcagccagagggacaaacagcagcgtctgtcctacagcgccttcacc
aaccagatgtacagcgcctccaccgacctcacctcctcccccgtggccgacgggccgccg
ctgccacctaggaaccagggcaaagctcctcccccatctggccctccctctacactcaca
ccaggaggcagctccaccctgtccaagaagagacctccgccccctcctcctggacacaaa
cgcaccctgtctgacccacccagcccgctctctcacagtccacacagtaaagggggcttg
actgggggaagcgactccacccctcctcctgtcagcaagatgtctcctgtttctaacaag
tttgaaggaattcctcagcagcaaagcactacttcaagcaacacaaagtctacacttggt
ccaagggttcttcccaaactacctcagaaagtggcattgcggaagattgacaccatacac
ccgtctatggataagcccagcctccctccagaggttttccagaagtccccgccagctact
gaacccccgcagaaggctcctctggcggacaggcctcagccgggagacctgccccccaaa
ccgcagccgtctgaacttcctcctaaacctggagaacttccacccaagccgcagctgtca
gacctccctcctaaacctcagctcggagacctcccgcccaaaccccagctcaaagacctg
cctcccaagcctcatctcgctgacatccccccaaaacctggaccagccgagtcctcttcc
aggccgcacgagacggtgcagaggcctcaaacgcaaccaccgcctccacctcaaagtcat
cctcagccgcaacctcagcctcagcctcagcctcagcctccagactcaccgtcaccgagt
cagcaagccaatatagggacccccgccccaccagctgctgaagacaccaatgggaccccg
gcagggactgcggagacaccagtgcccctcccgaggaagatcaacacgattggttattta
aatgtccaggggaagagcaaaacccgccgggtgaagacgatctatgactgccaggctgac
aatgacgacgaactgacttttgttgaaggagaggtgataatagttacaggagaagaggac
caggagtggtggatcgggcacattgaaggagagccggacagaaaaggggtgttccccatg
tcttttgtgcacatcctgagtgactga
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