Cyclopterus lumpus (lumpfish): 117750676
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Entry
117750676 CDS
T09199
Symbol
fer1l6
Name
(RefSeq) fer-1-like protein 6 isoform X1
KO
K22127
fer-1-like protein 6
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117750676 (fer1l6)
Membrane trafficking [BR:
clum04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117750676 (fer1l6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
FerI
dsRBD2
Motif
Other DBs
NCBI-GeneID:
117750676
NCBI-ProteinID:
XP_034417850
Ensembl:
ENSCLMG00005007701
LinkDB
All DBs
Position
21:3776895..3799206
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AA seq
1885 aa
AA seq
DB search
MDPSESPSTNRRKAKLMFGLKGKKKKKVNTDLVLANKGALDGEVGVPSEASPLLEGDAPE
DQPVTSAVRTRIKPNNKRAKLKTCIQKCEGKQQSFQIAINITEARQLVGENIDPSVVIEI
GDEKKQTSVKEGTNAPFYNEYFVFQFFAYKEVFLDKVIKLTVMHSKMLRSFFVGSFKLDV
STVYNQPGHQFTNKWAMLTNPGDISTGVKGYVKCDISVTAKGDAVRPEPKTSDAEEQIDK
NLLIPEGYPSERPWARFSVKVYRAEGLPRNNSSIMANVTKAFIGDNTALIDPYVVVDFFK
QVGRTSTQKSTAEPAWNEAIVFTEMFPPLCQRLKLQVWDEGSMGDVAIGTHYFDLRRISN
EQDGDRGFLPTFGPAWINLYGSVRSGSIADDAVELNEGIGEGVSYRGRIYMELAVEILSA
GSGSESKLSKVMKPLKDAKAGKGGGKDGKTPAGGGGGAAGGGTADDDKGKAVAAEVMHVE
PPPVLDTNNNESFLLFGALFEASMIDRKIGDKPISFEFSMGNWGNVLEPPEKSSVPIPSP
AARRTTMLDVPDSGDVAGSSTLSTSASSSLSPSAPSAPSSPLSPVLPREPADPPSTSKSS
TPPLRPLVVQGNKHYMYLPLEKQKPCISVLSHWENRTYRLLNSNILDNMAVRFEEGVTGA
AELNKKSDPGAEPMLKTILEEFCMDARIFITAVEAKLKAELKSSYLTQLDRKRLILCKQE
LEGMIGEAKSVVKRKRKAGGVKEMLQHATKLTHKLRFLVEEPQHTVPDVFVWLLSNNKRV
AYARLRARDLLYSGRQEARGIHCGKIITLFLKPPGKRVAGLSVQAKVDVYLWFGSCFDVV
HMLDDLPAGLRLATGGADASCPPSGLLCAEQQTFQLRCHMYQARGLIAADTTGLSDPFAR
VTCLSHSQTTNVISQTLSPTWNQCLLMDRLVLGGDLQNLQQEPLRILIEVYDEDALGKAE
YLGSTVAVPEVRLTSDPYAPPTLQYSPLHCGSQPGGDLLAAFELLQIQESGDGSLPALEK
QEGDIYTVPANIRPVLSTYRLEVLFWGLRELKKVQLLSVDRPQVFIECAGKTLRSSVIQR
YKSNPNFTTLVDVIELELPENEHLHPPLSITVVDWRAFGRSTLVGNHIINNLKAFKYTPP
PATERPGTAPPPKPQSTEGPSQSAAGSAAPPPNRDFLITVEDEAPPPPPAPPAPTPKDEP
RKKRGKAAEGEVKSTRGRSTKRKKRTIADESAECVIDWWSKYYASVEKQAKLDESPFPEV
FDKALPYEGLLSEGIGSLVGSDRDKKKKPKGKGTPEPNLGLVTKLATLKLYNKELEAEFG
LFNDWVNTYELFRGKANEEESEERFVGKFKGRFCLQKLSEDSAEDRDEDSAGGAYGVTRG
IPPNGPVQVLIRVYIVSASNLHPADPDGKADPYIVLRLGKNEIKDRDNYIPKQLNPVFGR
SFEMHASFPLESLLSVVIYDYDLVGGDDLIGETRIDLENRFYSRHRATCGLPTEYSLDGY
NAWRDGLKPSELLSKLCRDNGLDEPRFEPGRITLGDKVFVGKTCFMQEDEPLESYEHLSL
KILHRWPEIPAVGCKLVPEHIETRTLFNKARPGMDQGQVQMWVDMFPMDSPQPAPSVVIA
PRKPKGYELRIIIWNTEDVILEDSNFLTGQQSSDIYVKGWLKGLEDDRQETDVHYNSLTG
EGNFNWRFVIPFSYLPAEKVIVVTKKEHIFSLDKSEQKLPAILSLQVWDFETLSSDDFLG
TVELDLHGFPRGAKAAKSCKMDMMTDGTERISIFQQKRARGWWPFIKSGELTGKVEAEFH
LVSAEEAEKIPVGRARKEPEPLPKPNRPDTSFSWFINPFKCFFHLVWRSYKKYIIIGLLL
LVTALFLALLFYTLPAALSQKIVNG
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atggatccctcggaaagtccttcaaccaatcggcggaaggccaagttgatgttcggcctg
aaagggaagaagaaaaagaaagtcaacacagacctggtcctggcaaacaagggagctttg
gacggtgaggtgggggtgccctctgaagcgtctcccctgctggagggagacgcccccgag
gaccaaccagtaacctctgcagtcagaaccagaataaaaccaaacaataaaagggccaaa
ctgaagacctgtatccagaagtgcgaagggaaacaacagagcttccagattgccattaac
atcacggaggcccggcagctggtgggagaaaacatcgacccgagtgtggtgatcgagatc
ggcgatgagaagaagcagacttcggtcaaagaagggaccaacgctcccttttacaacgag
tatttcgtgtttcaattctttgcctataaagaggtctttttggacaaagtcatcaagctg
acggtgatgcactccaagatgctgaggagtttctttgttgggtcctttaagctggatgtg
tccacagtctacaaccagccaggtcatcagttcaccaataagtgggcgatgctgaccaac
cctggtgacattagcactggggtcaaaggttacgtcaagtgtgacatcagcgtcacggcg
aagggggacgccgtgcggccggaaccaaaaacgagtgatgccgaggagcagatagacaag
aacctgctgattccagaaggttacccctcggagcgcccctgggctcgcttctctgtgaag
gtgtaccgcgctgaaggtcttccccggaacaactccagcatcatggccaacgtcaccaag
gccttcatcggagacaacacggccctcatagacccgtacgtggtggtggacttcttcaaa
caagtgggtcgcacgtccactcagaagtccacagcggagccggcgtggaacgaggcgatc
gtcttcacggagatgtttccccctctgtgtcagaggctgaagctccaggtctgggatgag
ggaagcatgggcgacgttgccataggaacgcattactttgacctgaggcgcatctccaat
gaacaggatggcgacagagggttcttacccacgttcggcccggcgtggatcaacctgtac
ggctccgtgagaagcggttcaatcgccgacgacgcggtggagctcaacgagggcatcgga
gagggcgtgtcctacagaggtcgcatctacatggagctggctgtggagatcctctcggcg
gggtcgggttcggagtccaaactcagcaaggtgatgaaaccgctgaaggacgccaaagca
ggaaaaggcggagggaaggacggcaagactcctgcaggaggaggaggaggagcggcagga
ggaggaaccgccgacgacgacaaagggaaagccgtggctgcagaggtcatgcatgtggaa
cctcctcctgtgctggatacgaacaacaacgagagctttctgctcttcggggcgttattc
gaagccagcatgattgacaggaagatcggagacaagccaatcagcttcgagttctccatg
ggtaactggggtaacgtcctggagcctccagagaagtcctccgtccccatccctagtccc
gccgccaggaggacaacgatgctggacgtcccggacagcggcgacgtcgccggctcctcg
accttgagcacctcggcgtcctcctcgctctccccgtccgccccgtccgccccgtcctcc
cctctctccccggtgcttcccagagagcccgcggacccgccctcgacctccaagtccagc
acgccgccgctgaggccgctcgtcgtgcaggggaacaagcactacatgtacctccccctg
gagaagcagaagccgtgcatcagcgtgctgagtcactgggagaaccggacctaccgactc
ctcaactccaacattctggacaacatggccgtgcggtttgaggagggtgtcaccggtgca
gccgagctaaacaagaagtcagatccgggggcggagcctatgctcaaaaccatcctcgaa
gaattctgtatggacgccaggattttcataacggcggtggaggccaagttgaaggcggag
ctaaagtcgagctacctgacccagctggacaggaagcgcctcatcctgtgtaaacaggaa
ctggagggtatgataggagaggccaagtccgtggtaaagaggaagagaaaagctggtggt
gtgaaagaaatgctgcagcatgcaacaaaactcacacacaagctacgcttccttgtggag
gagccccagcacacggtgcccgacgtgtttgtgtggttgctaagcaacaacaagcgcgtc
gcgtacgctcggctccgtgccagagacctgctgtactccggccgccaggaggcccgagga
atccactgtggcaagataataacactgtttctgaagcctcccgggaagcgcgtcgcaggc
ctgtcagtccaggcgaaggtggacgtgtatctgtggttcggatcctgtttcgacgtcgtc
cacatgctggacgaccttcccgcggggctccgtttggccacagggggcgctgacgccagc
tgccctccgtcgggcctcctctgtgcagagcagcagacgttccagctgaggtgccacatg
tatcaggcccgcggcctcatcgcggcggacaccacgggcctgtcggacccttttgcccga
gtcacctgtctgtcacacagccagaccaccaacgtgatcagtcagactctcagtcccaca
tggaaccagtgtttgctgatggaccgcctggtgctcgggggggatctgcagaacctccag
caggagccgctgcgcattctcatcgaggtgtacgacgaagacgcgctgggcaaggcggag
tatctggggtccacggtggcggtgcccgaggtccgcttgacctccgacccttacgcaccg
ccgactctgcagtacagcccgctgcactgcggcagccagccggggggagacctgctggcc
gcattcgaactgctgcagatccaagagtccggagacgggagtctgccggcgctggagaaa
caggaaggagacatctacacggttcctgccaacatcagacctgtgctcagcacctacagg
ctggaggtgttattttggggtctgagggagctgaagaaggttcagctgctgtctgttgat
cgcccacaggtgttcatagagtgtgcaggtaaaacactgcgttcctccgtcatccagagg
tacaagtccaaccccaacttcaccacgctggtggacgtcatcgagctggagttaccagag
aacgaacacctgcaccctccgctcagcatcaccgtcgtggactggcgggccttcggtcgc
agcacgttggtcggaaaccacatcatcaacaacctcaaggccttcaaatacactccgcct
ccggccaccgagaggccgggaaccgccccgcccccaaagccacagagcactgagggaccg
tcccagtccgccgccggttcggccgcaccgccgccgaatcgagacttcctcatcactgtg
gaggacgaagcccctcctccacctccagccccacccgcgccaacgccaaaggacgaaccc
cggaagaaaagggggaaagctgccgagggcgaggtgaagagcacccgcggtcgctccacg
aagaggaagaagcggaccatcgccgacgagtcggccgagtgcgtcatcgactggtggtcg
aaatactacgcgtctgtggagaagcaggccaaactggacgagtctccgttccccgaggtc
ttcgataaagctttgccgtacgagggcttgctcagcgagggaatcggctccttagtcggc
agcgatcgagacaagaagaagaaacccaaaggaaaaggaaccccggaaccaaacctgggt
ctggtgaccaaattagccacgctcaagctgtacaacaaggagctggaggcggagtttggc
ctcttcaatgattgggtgaacacatatgagctgttccgggggaaagccaacgaggaagag
tccgaggagcggttcgttggcaagtttaagggccggttctgcctgcagaagctgagcgag
gactcggccgaggaccgggacgaagactcggccggaggggcctacggggtcacccgagga
atcccccccaacgggccggtccaagtcctcatccgggtttacatcgtctctgcgtccaac
ctgcaccctgccgatccggacgggaaggcggacccttacatcgttctccggcttggaaag
aacgaaatcaaagaccgggacaactacatccccaagcagctgaatcccgtgtttggaagg
tcgtttgagatgcacgcgtcgttccctctggagtcgctgctgtcggtggtgatctacgac
tacgacttggtgggaggggacgacctgatcggagagactcgcatcgacctggagaaccgg
ttctacagccggcacagggccacctgcggactccccaccgagtacagcctcgacggctac
aacgcctggagagacggcctgaagccgtcggagctgctgtccaagctgtgccgagacaac
gggctggacgagcctcggttcgaaccgggccgcatcacgctgggcgacaaggtgttcgtg
gggaagacgtgcttcatgcaggaagacgagccgctggagtcctacgagcacctgtccctg
aagatcctgcaccgctggcccgagataccagcggtggggtgcaagctggtcccggaacac
attgagaccagaaccctgttcaacaaggcccggcccggcatggaccagggtcaggtccag
atgtgggtcgacatgttccccatggactcacctcaaccggcaccttcggtggtcattgct
cctcgtaaaccaaaagggtacgagctgcgtatcatcatctggaacacagaggatgtgatc
ctggaggacagcaacttcctgaccggtcagcagtccagcgacatctacgtcaaaggctgg
ttgaaagggttggaggacgaccggcaggagaccgacgtccactacaactctctgaccgga
gagggcaacttcaactggcgcttcgtgatccccttcagctacctgcccgcggagaaggtc
atcgtcgtgacgaagaaggagcacatcttctccttggacaagtctgagcagaagcttccg
gccatcctcagtctgcaggtctgggacttcgagacgctctcctccgacgacttcctcggc
acggtggagttggacctccacggtttcccgcgcggggccaaggcggcgaagtcgtgcaag
atggacatgatgacggacgggacggagaggatctccatcttccagcagaagagggcgaga
ggctggtggcccttcatcaagtctggagagctgacggggaaagtggaggcggagtttcat
cttgtgagcgccgaggaggcggagaagatccccgtcggccgagcccgcaaggagccggag
ccgctgccgaagccaaatcgcccggacacctccttctcgtggttcatcaaccccttcaag
tgcttcttccacttggtgtggcggagctacaagaagtacatcatcatcggcttgttgctg
ctggtgacggcgctgttcctcgccctgctgttctacacgctgcccgccgcgctctcccag
aagatcgtcaacgggtga
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