Cyclopterus lumpus (lumpfish): 117750862
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Entry
117750862 CDS
T09199
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117750862 (aff3)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117750862 (aff3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
117750862
NCBI-ProteinID:
XP_034418167
Ensembl:
ENSCLMG00005019838
LinkDB
All DBs
Position
21:7552284..7567988
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AA seq
1222 aa
AA seq
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MPTVLAGKGKLSIGGFLLGCAYSQVTRSQHKSCAKYILEDMTQQAFAGDQRILYSSKSCE
AKPPAAQQRQSRGDVQLRMTRHPRVAPHKSMLADDLKLSSDDDDTQRATHGPASWVGHSL
SAQRAHTHGRRVRHSSSDSSGSNSTAESCSSSLYSRSPSRSPDVHPDPASPADTQPPRNS
KETDHPSVAQWQLDKWLKKSRRKSSSGDRVPSESIPGRPPSPHTQRAPSPARSWDSNQEY
SPSQSPIPSPQFNFSHQTCHLPSPGYSFCPSPSPFPSTCPSPSPSPGPSPIPSPAPSVCP
SPCGSPRASRSPSPIPRDPPRSPSPGPPALSRVRHCPEVQRTQPSLTINPHRTKNRSWIT
PLPNTETRSKPTNSTHPQPPHQHRPKTRPAQDREQSKPKTSTVLNSNQSHSHKSRPTSNF
HPSSKQLSEAPKHTSHFEQIQSSRSNHNSNHKPRPTFQSSSQLSPKTSKHLVPTNRETHS
GHSSRSQSTPKVATNHNTGLSSRSNNSLKPRAKSSEATAPTPVHVNHTTTTRKKPQSKGQ
EGDLRGDHLTQAEGREHERKEDRSRKKQQRKPERKVDRRLAEEQLHRRPWIHSSTEEEEE
EEEEEEEEGEIEKQSRREETTRVENRRGRDQQLRREWQTVQVQPGLLTNTERHRQEDDSH
HQGRTKKGGRSEEEREFPKDPSPPPSRSPTPRRPSSSPSGSSSANSDPESEYQAPITKVP
ADSTSYKRGRQGPGRPDANRPKVVHPRGPASGHPREEQQSEGKQKLYTLVPFGRGEQTTG
PSRRGLRNLVVQIDLCLLKRVPDRTPSSTVKKPSSSSSPSSTRDKQREAMKHLFVPEAVT
KDGKRKRKLENGVSHRESKRSIPHANDLPGHTEAVSHTAERNFVTETVHNGYLEEYLDSK
RPLSPLSPLSDSPRSTKPLPKSKTSEQHHVHKSRDKNRDSALKPKMEVECAKVSRPPSES
WGLAGHRGAVPSNETPHHAEYYLHEAKRMKHRADAMVDKLGKAVNYVDAALSFMECGKAM
EEGPLEAKSPYTMYSETVELIRYAMRLKSHSGPGARQEDKQLAVLCFRCLALLYWQMFRL
KKDHAFKYSKVLLDYFKSSPKVPSTPPCWSDSGKSTGGTPSSLSPNAKHLGRGSQEASAF
PSLISIPQRIHQMAANHLNITNSVLYSYEYWEVADNLTQENKEFFNYLNTLSGPLTLHSS
IAHAVQYTRQALQWIRISAKLN
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtcctcgctggaaaagggaaactttccatcggcgggttcctactcggatgc
gcgtattctcaggtaacaagaagccaacacaaaagttgtgccaaatatattctggaggac
atgacccagcaagccttcgcgggggaccaacgaatcctttacagctctaagtcatgtgaa
gcaaaaccaccggctgcacaacaacggcaaagtcggggggatgttcagctgcgaatgacc
cgtcaccctcgcgtggcacctcacaaatccatgctcgctgatgacctgaagctgagcagt
gatgacgacgacacccaaagggcaactcatgggccggcttcctgggttggacacagcctg
tcagcacagcgagcgcacacacatggcaggcgagtgagacattccagctcggactcttcg
ggctcaaactccaccgccgagtcgtgcagcagcagtctttactcccggagccccagccgg
agcccagacgtccaccccgacccggcatcgcctgccgacacgcagcccccgcgcaacagc
aaggagactgatcacccctccgtggcccagtggcagttggataaatggctgaagaagtcc
cggagaaaatcttccagcggtgaccgagtgccctccgagagcattccaggacgtcctccc
tctccccacacccaaagagccccatctccagccaggtcctgggacagcaatcaggaatac
agccctagccagagccctattcccagcccacaattcaatttcagccaccagacctgccac
ctacctagccctggttacagcttctgccctagccccagcccattccccagcacatgccca
agtcccagcccgagccccgggcccagcccgatacccagtccggctccaagtgtttgtccc
agtccgtgtgggagcccgagagccagccgtagccccagccctataccgagagaccctcca
agaagccccagtccaggcccacctgctctttccagggttcggcactgccctgaggttcag
agaacacaacctagcctaacgatcaatccccacaggacgaaaaacaggtcatggattacc
ccattgcctaacaccgaaaccaggagcaagcctacaaacagcactcatcctcagccgcct
caccagcacaggcccaagactcgacccgcacaggaccgagagcaaagcaaacccaagact
tctactgttttaaactctaaccagagtcacagccataaatctagacccacgtcgaacttt
catcctagttctaaacagctctctgaggctcccaaacacacttcacattttgagcaaatc
cagagtagcagatccaaccacaactccaaccacaagcccaggcctacatttcaatctagc
tcacaacttagcccaaaaacatcaaagcacttagttcccactaatcgtgaaacccactct
ggtcatagttcacgatcccaatctaccccgaaagttgcaactaatcataatacggggttg
agctccagatcaaacaatagccttaaacccagggccaagtcttcggaggctacagcccca
actcctgtgcatgttaatcatactacaacaacacggaagaaaccccagtccaagggtcag
gagggagacctcagaggagatcatctgacccaagctgaggggagggaacacgagagaaaa
gaggacagatctcggaaaaaacaacaaaggaaaccggagagaaaggtagacaggaggctg
gcggaggagcagctgcatagacgtccctggatccatagttcgacagaagaagaggaggag
gaggaggaggaggaggaggaggagggagagatagagaagcagagcaggagagaggaaaca
acaagggttgaaaacaggagagggagggaccagcaacttagacgtgaatggcaaaccgtc
caggtccaaccaggactgctgaccaacactgagcgacaccgtcaagaagacgactcacac
catcaggggaggacgaaaaagggagggagaagtgaggaggagagagagttcccgaaagac
ccgtcgcctcctccgtcacgttccccgactcctcgcagaccatcctcctcgccctcgggc
tcctcctctgcaaattcagatccggaatctgaatatcaggctccgatcaccaaagtgcca
gcggactccacgtcttacaagagagggcggcaaggtccgggcaggcccgacgccaacaga
ccgaaggtcgtgcaccccagaggacccgcctcgggtcatccaagagaggagcagcagagt
gaggggaagcaaaaactctacaccctggtcccattcgggcgaggtgaacaaaccacaggg
ccttcccggcgagggctcaggaacctggtggtgcagatagacctctgtcttctcaaaagg
gtcccggacagaaccccgagttccactgttaagaaaccctcctcctcttcctccccttca
tccaccagggacaagcaaagagaggccatgaaacacctgtttgtccccgaggctgtgacg
aaagacggcaaaaggaaacgcaagttggagaatggagtgtcacacagagaaagcaagagg
agtattcctcatgcaaatgacctgccgggccacacggaggccgtatctcacacggcggag
cgcaactttgtgacggagaccgtgcacaacgggtacttggaggagtacttggacagcaag
aggccgctgtcgccgctgtctcctctgtccgacagccctcggtccaccaagcctctcccc
aaatcgaagacgtcagagcagcaccacgtccacaagagcagagacaagaatagagattcc
gctttaaagcccaagatggaggtggaatgtgcaaaagtgtcgagaccgccgtccgagtcc
tggggcctggcgggtcacaggggcgccgtgccgagcaatgagactccgcaccacgctgag
tactacttacatgaagctaaaaggatgaagcaccgtgcagacgcaatggtggataagctg
gggaaggctgtgaattacgtggacgccgccctctcctttatggaatgtgggaaagcaatg
gaggaagggccactagaggccaagtctccttataccatgtactcagagacagtggagcta
attaggtacgcaatgaggctgaagagccactccggccctggagcgagacaggaagacaaa
cagctggcggttctgtgtttccgatgcctcgccctcctctactggcaaatgtttcggtta
aagaaggaccatgcatttaagtattccaaagttctgttggactactttaagagttctccc
aaagtgccttctacaccaccctgttggagtgactctgggaagagcacgggaggaacacct
tcttccctctcgcccaacgccaaacacctcggacggggttcacaggaggccagcgccttc
ccctctctcatcagcattccccaacgtatccaccagatggcagcaaatcacctgaacatt
accaacagtgtcctgtacagctacgagtactgggaggtggcagacaacctcacacaggag
aataaagagttcttcaactacttgaatactttgtctgggccattgactcttcacagtagc
atcgctcatgctgtccaatacaccaggcaggctcttcagtggatacgcattagtgccaaa
ctgaactaa
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