Colletotrichum lupini: CLUP02_00060
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Entry
CLUP02_00060 CDS
T08561
Name
(RefSeq) TPR/MLP1/MLP2-like protein
KO
K09291
nucleoprotein TPR
Organism
clup
Colletotrichum lupini
Pathway
clup03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CLUP02_00060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clup03019
]
CLUP02_00060
Messenger RNA biogenesis [BR:
clup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CLUP02_00060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
ATG17_like
ZapB
Tropomyosin
CENP-F_leu_zip
DUF3693
Motif
Other DBs
NCBI-GeneID:
73334124
NCBI-ProteinID:
XP_049135071
LinkDB
All DBs
Position
1:complement(join(211372..217427,217495..217783))
Genome browser
AA seq
2114 aa
AA seq
DB search
MAAAVDVGYVAGHLGLSESTVSTATTDPTPELVASLLEAVIAKAREYDELYAQKLQVDIE
LESAHHSAESRCQTFKATADKALKDVEEIRQKLKEEETKRQTVENELQSLKSRGSDHDSE
ITTLRDRVESLQSSNRANMALLESRNARDSELSEELAKQHQKNVQLQKEITALQQSVQAA
QAAVSSAKYREESLQQQLDLARRNGEWFETELKTKSEEALKYRREKGARIAELQRQNEDA
KSSIESLKRGEQQLRDRLDAAQAKAEEALTKVQQQQEAFARSEESYKHEIESKQRVVDMT
NQLADSHKARVQTLEGEKEALKEKHANEVRRIQHELERERETCRALEERVTQLEGEVDEL
HARIEQGPPPGSAPQTPRMNGSLLGRPASPFATPASARNKSAITATQAIDELYKVKGQLA
GEKRRNQQLAEELDNMIALLEAKTPEIEELQNEADTLRSEITRMSELSQSSFEERDAAKK
SARKAESALANAQAESKILRTQLRDLSTQIQMLVFNMHAREKGLEQLTREETVRLEQLSR
GEIAEGALNDMSDTHQFITQKFVVFKDIQELQAKNQELLRVTRELAEQMESEEAVAAKSQ
AVEDHQSVERLQQELANMIEETKSLRSTMESFKSERDMFRRLLQQKASAGELASILGSDD
GQRLPLTSIETEEGDGLSPQAALRNLQVEFDTYRNDEESVRRSLREQIDRLSSEKNSLQG
EVAKITSQITLASERYEMLHSNFVALQSENKEIQKRNQTLSEDSIKHEIRTQQVAEELID
AKGLLESVRNEAANLKAEKKLWKDIQDRLNQDNESLVQEKTRLNNLLASQQSMQNERDIS
ESEYRRKAQSKIDNLEQELNSTKRKLSDEMEEGKKLQLRKEFDAREAQKRIDELSTSLSQ
IREEHVAVKTSRDHLQARVDELTIELRNAEDRAGRLAPRPTPRPGTMAPPTQTDQDSEAE
VRELINEVSDLKRELDIAKSQLENAREQTEQYKQLSEQNEEALTEFTTTTEQFREEMDAA
FAAKDAKIKELEQRVEDLSSELASSNKELSHLRDSQAEVARTYEDEKTILDEEVKRLKEE
ADRHSEAAKFHQQDLRAQSEITAKAQQDYEHELVKHAEAAKLVQQLRTEYNELKSQTATL
RAEAESAKVALSQSESSWEERKQRIEQEMSEIKARRDDVNAQNKLLHEQLESITKQFSAL
KEGRNAAAGDGNDSAETSSDGAADGLRELNNYLRREKEILEVQYDLKVQESKRLQQQLEY
SQSQLDEARLKLDQERRSQAESGQASVAHKDLMDKLNELNLYRESSATLRNELAHARTQI
SEKNTRIEELEGKVQPLEARIEELQTQKGFLEEEIKQVQEDRDRWQKRTEGILTKYGRVD
PAEMEQLKQTINDLQAERDALKESEGPLRAEFEEIKQTLETERTNWANARQRMTDQFKER
SRKITGEKNEAIGARNEAVTEKDAAIAEREQLQQQLNSMNTELETTRQNLQTTTQQRAEF
EQQVKNFQQQVQRLQQDAQANQSSAPPPAAQPTTDGSPPVSSEVVAQLEQQLAEMRTQLE
AISAQKTTAEQELEALRSQLQTAVSERDQAVEAAQQAAQAQLQPAAQSTAEPVATNGASG
LSDTERKALEEKIATAEAKATEADRKAKELEENITQTIKERSDKMRNALNEKLRQSREKM
EAEFATRVEQEKVIWKAEQQGAAPAKPAGEQPAVPATPIKQQDPDAAPATPMTGTPAGAA
DLSQLPDAEIRKFLSTNATVRNIMSGNLRKKLEEQTAKVKNETETSMRAEFEQRIANARE
EGQLLAQKKSALQINMKDNQLRGANAKIEVVSTAATKTPQRPVGEVWEEAKVAKPAPAAP
QQSPAKLAGNAQPAAPRPSISAPSAATPAQAAAPTPGEFIQMNVQHSTLSNRPQAPPAST
NQAQPSTGAATSGIPAPGSSIPQKRQIPTPGDTKPAANNAAANPFAAGAANGTPAQANPF
SQSTQGQQQQQTPQQQQNPFASSTQGAPAGQTAPQGHGLPQPPAQAAPGQRSGIPLPGRG
GAAGRGRGGAYAAGNRVSSGGLAGRGGRGGGRGGQNAGSLNPGANDFQPGNKRPRGDSEA
GGNAGAKRARGGGH
NT seq
6345 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcggtggatgtaggctacgtggccggccacctagggctgtccgagtcgacg
gtctcgacagccacaaccgacccgacccccgagctcgtcgcgagcctcctcgaagccgtc
attgcgaaggcacgcgagtacgatgagttatatgctcagaagcttcaggtcgacatcgag
ctcgaaagcgcacaccacagcgccgaatcaagatgccagacattcaaggcgacagccgac
aaggccctgaaggatgtcgaggagattcgccagaagctcaaagaagaagaaacaaagcga
caaacagtcgagaacgagctccagtcgctcaagtcccgcggatccgatcacgactccgag
atcactactctccgcgaccgcgtcgagtccctacaatcttccaatcgcgcgaatatggct
ttgcttgagtctcgaaacgcccgcgattcagagctgtctgaagagttggcgaagcagcac
cagaagaacgtccaactccaaaaggagatcacggctctgcagcagtcggttcaggctgct
caggccgctgtgagtagcgcaaagtaccgagaggagtcactacaacaacaactcgatctt
gctcgacgcaatggcgaatggttcgagaccgagctcaagaccaagagcgaagaagctctc
aagtaccgccgcgagaagggcgctcggatcgccgaattacaacgacaaaacgaagacgcg
aaatctagtatcgaatccctgaagcggggtgaacaacagctccgagatcgcctcgacgca
gctcaagccaaggcggaagaggccctcaccaaggtccagcaacaacaggaagcattcgcc
cgcagcgaggagagctacaagcacgagatcgagagcaagcagcgcgtcgttgatatgacc
aaccaacttgccgacagtcacaaggcccgtgtgcagaccctggagggcgagaaggaagcc
ttgaaggagaagcatgcaaacgaagtccgtcgcatacagcacgagctcgaacgcgagagg
gagacttgccgtgccctggaggaacgggtgactcagcttgagggcgaggtcgacgagctt
cacgcccgcattgaacaaggacccccaccgggatctgcacctcagacaccccgtatgaat
ggatcccttctcggaaggcctgcctcgccttttgctactcctgcttctgcgcgaaacaag
tccgccatcaccgcaacacaggctatcgacgaattgtacaaggtcaaggggcagctggcc
ggagagaagcgccgtaatcaacaactcgccgaggagctcgacaatatgattgctctgttg
gaagccaagacacccgagatcgaggagctccagaatgaggccgataccctgaggtccgaa
attactaggatgtccgaactatctcagtcaagcttcgaagagcgcgacgcagcaaagaag
agcgcgcgaaaggctgagagtgccttggccaacgctcaggccgagtccaagatcctccgc
acacaacttcgtgacctcagtacacagatccagatgttggtcttcaacatgcatgcccgc
gaaaagggcttggagcagctgactcgcgaggagacggtccgcctggagcaactttcccgt
ggagaaatcgccgagggcgctctcaacgacatgtcggatacccaccagttcattacccag
aagttcgtcgtcttcaaggacattcaggagctgcaagccaagaatcaagagcttctgagg
gtaacccgcgagctggcagagcagatggagagcgaggaggctgttgccgccaagagccag
gctgtggaagatcaccaatcggttgagcgactgcaacaagagctcgccaacatgattgaa
gagaccaagtccctgagatcaacaatggagagcttcaagtccgagcgcgacatgttcaga
cgtctccttcagcaaaaggcctctgccggcgagctcgcttctatccttggctccgacgac
ggccagcgcctccccctcactagtatcgagactgaggaaggcgacggcctgtctccacaa
gctgcgctgcgtaatctgcaagtcgaattcgacacttaccgaaacgacgaggaatccgtc
cgtcgctccttgcgggagcagattgacaggctttcaagcgagaagaattccctccagggc
gaggttgcaaagatcaccagccagattacccttgcctccgagagatacgagatgctccac
tccaattttgttgcgctgcagagcgagaacaaggagattcagaagcgcaaccagacgctc
tcagaagactccatcaagcacgaaatccgaacccagcaagttgccgaagaactcatcgat
gccaagggcttgctcgagagcgttcgaaacgaggcggccaacctcaaggcagagaagaag
ttatggaaggacatccaggatcgtctcaatcaagacaacgagagtcttgtgcaggagaag
acgagactcaacaatcttttggcaagccagcaatccatgcagaacgagcgagacatttct
gagtctgagtacaggcggaaagctcagtccaagatcgacaatcttgaacaagagctgaac
agcacgaagcgcaagctgtctgatgaaatggaagaaggcaagaagcttcagctcaggaag
gagttcgatgctcgcgaagcccagaagcgcatcgatgagctctctaccagtctgagccag
attcgcgaggagcacgtcgctgttaagaccagccgcgaccacctgcaagctcgcgttgat
gagctcaccatcgaacttcgcaatgcggaagacagagctggtcgcctggcgccccggcca
acgccaaggcccggcacgatggcacctcctacccagactgaccaagacagcgaggccgag
gttcgcgagttaatcaatgaggtttccgacctcaagagggagcttgacatcgccaagtct
cagctcgagaatgccagggaacagacagagcaatacaagcaactcagcgaacaaaatgaa
gaagctcttaccgaattcacaaccaccacagagcaattcagggaggagatggatgctgcg
ttcgcggccaaggacgccaagattaaggagttggagcagcgtgttgaagatctgtcatcg
gaactcgctagctccaacaaggaactgtcccacctccgcgactcccaagccgaagttgcc
cgcacgtacgaggatgagaagacgattctggacgaggaagtgaagcgtttgaaggaagaa
gcggaccgccactcagaagccgccaagttccaccaacaggaccttcgtgctcagtcagag
atcaccgccaaggctcaacaggactacgaacacgaactcgtcaagcacgccgaggctgcg
aagctcgtccaacagttgcgcaccgagtacaacgagctcaagagccagacggcgactctg
agagccgaggcggagtcggccaaagttgccctgtctcaaagtgaaagttcctgggaagag
aggaaacagcgaatcgagcaggaaatgtcagaaatcaaggctcgccgcgatgatgtcaac
gcacagaacaagcttctgcacgagcagctggagagcatcacgaagcaattctctgcgctc
aaggagggtcgcaatgcggcggccggggacggcaacgatagcgcggaaactagcagcgac
ggtgcagccgacggtcttcgggaactcaacaattatctaagacgggagaaggagatcttg
gaggtgcagtacgacctcaaggtgcaggaatccaaacgcctgcagcaacagctcgagtac
tcccaatcccagctcgatgaggctcggttgaagctcgaccaggagagacgctcacaagct
gagagcggccaagcctccgttgcccacaaggatctgatggataaactcaacgagctcaac
ctttaccgtgagagcagtgccaccctccgcaacgagctcgcccacgcccggacgcaaatc
tccgagaagaacaccaggatcgaggaattggaaggcaaggtacagcctctggaggctagg
atcgaggagctccagactcaaaagggcttcctcgaggaagaaatcaagcaagttcaggag
gaccgcgacaggtggcagaagcgaaccgagggcatccttacaaagtacggccgcgttgat
cccgccgagatggagcaactcaagcagaccatcaatgatctgcaggccgagcgcgacgct
ctcaaggagtctgaaggccctcttcgagcagagttcgaggagataaagcagacattggag
acggagaggaccaattgggcgaacgctcgccaacgcatgaccgatcagttcaaagagcgg
tcacgtaagatcactggcgagaagaatgaggcaattggtgcacggaacgaggcggtcacg
gagaaggacgctgcgattgctgagcgtgaacaactgcagcagcaactcaactctatgaac
accgagctcgagacaacaagacagaatttgcagacgacaacacagcagcgtgcggagttt
gagcagcaagtcaagaacttccagcaacaggtacaaaggctacagcaggatgctcaagcc
aaccaatctagcgcgccacctcctgccgctcaacccacgacagacgggtctccaccagta
tcttcggaagtagtcgcccagttggagcagcaactcgccgagatgcgaacccaactggaa
gccatctcagcccaaaagacgaccgccgagcaggagcttgaggccctgcgatcgcaactg
cagacagccgtctccgagagagaccaggctgtcgaggctgcacagcaggctgcccaggcg
cagcttcagcccgccgcccagtcgacggcggagcctgttgccacaaacggcgcgagtggc
ttatccgacactgagcggaaggctttagaggagaagattgctaccgccgaagccaaggct
acagaggctgaccgcaaggcgaaggagctcgaagagaacatcacccagaccatcaaggag
cggtctgataagatgcgcaacgcactcaatgagaagctacgccagtctcgcgagaagatg
gaagccgagttcgccacgagggtagagcaagaaaaggtcatttggaaggctgagcagcaa
ggcgccgcacctgctaagcctgcgggagaacaaccggctgtgcctgcgacgcccatcaag
cagcaagacccggacgcagctccggcaacgccaatgaccggtacacctgctggtgctgcg
gatctatctcaactccccgatgccgagattcggaagttcctttctaccaatgctaccgtg
cggaacattatgtcgggaaatcttagaaagaaactcgaggaacagactgccaaggttaaa
aacgagacagagacgagtatgagagccgagttcgagcagagaatcgcaaacgctcgcgag
gaaggtcagctgctggcacagaagaagtctgcgctgcagatcaacatgaaggacaatcag
ctcagaggtgccaacgccaagatcgaagtcgtgtccacggccgcaacaaagacacctcaa
agacccgttggggaagtttgggaggaagctaaagttgccaaaccagctcccgccgcgccg
cagcaaagcccggcgaagctcgctggcaacgcacaacccgccgcaccccgtccttcgatc
tcggcgccctcggctgccacaccagcccaagctgctgccccgacacctggtgagtttatc
caaatgaacgtgcaacactctactctttccaaccgtcctcaagccccaccagcctcaacc
aaccaagcacaaccatcaaccggggctgctactagcggaatccctgcgccgggcagtagc
atccctcagaagagacaaatacctactcctggggacaccaagccggcagccaacaatgct
gcagcgaacccgttcgcggccggtgctgctaatggcactccggcccaggccaacccgttc
tcacagagtacacaaggacagcagcagcagcaaacaccacaacagcaacagaaccccttc
gcttccagtacacaaggggcaccggcgggtcagaccgcaccgcaaggtcatgggctaccg
caaccaccggctcaggctgctccaggccaaaggagtggcatccctcttccaggacgaggc
ggtgcagctggtcgtggtcggggtggcgcttacgctgccggaaatagggtgtcaagcggt
ggtctagcaggacgtggcggacgtggtggtggccgaggaggacaaaatgccggctcgttg
aaccctggtgccaacgatttccagcctggtaacaagcggcctagaggagattccgaagcc
ggcggaaatgctggtgcgaagcgagccagaggaggtggacactga
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integrated database retrieval system
