Colletotrichum lupini: CLUP02_08294
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Entry
CLUP02_08294 CDS
T08561
Name
(RefSeq) SNF2 family domain-containing protein
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clup04121
]
CLUP02_08294
Enzymes [BR:
clup01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
CLUP02_08294
Ubiquitin system [BR:
clup04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
CLUP02_08294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
zf-C3HC4_3
Helicase_C
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Prok-RING_4
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-RING_4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
73342294
NCBI-ProteinID:
XP_049144427
LinkDB
All DBs
Position
4:complement(join(4018103..4018676,4018734..4019175,4019230..4022445,4022508..4022577))
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AA seq
1433 aa
AA seq
DB search
MARTKMTARRGRPLPKTTAISFHVDFIHQLQNLPSNDEAQPQDHDATEPSAKRLKRSHED
VKALLVADEELEFVRKCPEETLPFTRHNIGPHLQLVEDKSNEFSIASRIKPSAPWINISV
TTHSNSINQRLAACLYVFAQKGKKTHGEGDVWAELDVALRPQGDFLSVVFCFKIYWNETK
APYSWLRSANERQVSQRVLNTFLHDETASSASSSTQQSWSPLDFYEAAHVPPADDKHALS
IDIPELTAKLYPYQKKTIQWLLGREGVRWRGASAESGSNIEELPPPLGTDIAHSFRKVRT
EGGSGQSFYVSDLYHVVTTDLTAFQQAERDIRGGILAEEMGLGKTLEVISLVTLHRRPPT
DSHIVTREGDELLTTGATLIVTPESLRNQWIAELARHAPHLRVKFYPGRKNVSFGTEDHL
RADLASYDVVIATYPVLSAEVHFALKPPDRSRRQERKYDRLVSPLTRISWWRVCLDEAQM
IEGGVSGAAIVARVLPRVNVWGVTGTPVKNDVKDLHGLLSFLRYEPYASSPQIWKALTES
HKPLFRSLFGSIALRHTKQLVRHEITVPPQKRYVITLPFTAVEEQYYSEMFKTMAKSCGL
DLLGAPVKPDWTPEKNETEMRTWLNRLRQAALHPEIVQIRGTGRKVGPMRTVDEVLDAMI
EQSENDIRADHRAYLQARLTRGQMLENSPRVKEALEIWEKVKVDAMNLVAECRQEVKAAV
GVPLGGIPAAVQEGDASDQGEVDEGATNALVGEARTKLRHALEVLHKATFFCANALFQIK
SNTDMTEPDSDDFKKYQKLEDEEYSKAQEVRREILSESHARAMSLMNRLGRQAETQSFVE
IPELTLSGPKGLESAPTLDTLEELYGILNEQADRIDEWREALISLLCQALIDEEAENDVT
GEEFTDSTQIQEELIVHVQILRAAIADRQDAISGLENALVRHETNVSLTAAENGDGPAPE
KFLALNDARDSVKPSPVRHGSLRRAIAELRAIASRLPRDGGGRASLEHGIVTKQIQQTQA
NITAQTKAATALERETDRFTSAMNARVEYYRQLQAVSDSVAPYEGPDDGPAVASCIASEN
NYRRKLDSSKAKHRYLLNLKMDGGKSNEPRMCIICQSHFTIGVLTVCGHQFCKDCMKHWH
KAHHNCPMCKRKLRLTELHDITLKPRELKLHDETPVSASPGVKKDEAAKTNGIYSRFSTE
KLAQINDIELLRMSFGTKVDSIVRHILWLRESDPGAKSVIFTQYKSFLAILGEAFSRYQI
GFSAIDRPNGIMKFQKDASIECFMLHGRANSSGLNLVNASHVFLCEPLLNTALELQAIAR
VDRIGQKNETTVWLYLIEGSVEESIYNLSVKRRMEHMGQNSKGKSKESTPEVQEPTLEAA
NTLELEQAHLNQLMSRDKNAGEAVATDDLWECLFGRVSRRITSSVAEEIVAED
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcacaaagatgacagctcgccgtggaaggccgctcccaaagaccactgcaatc
tcatttcatgttgactttattcaccaactgcagaacctcccgtccaatgatgaggctcaa
ccccaagaccatgatgcgactgaaccgtctgcaaaacgactgaagcgatcacatgaagac
gtgaaagcgcttcttgtggctgatgaagaactggaattcgtgcgaaaatgccccgaggaa
acacttccctttactcgacacaatattggacctcatttgcaactagtcgaagacaaatcg
aatgagtttagtattgcctctcgcatcaaaccgtcagcgccgtggatcaacatttctgtc
acaactcattcgaactccatcaaccagcgtctggcagcttgtctgtatgtctttgcccag
aaagggaaaaaaactcatggcgaaggcgatgtctgggcggaacttgatgtcgcactgcgc
cctcaaggagattttctctccgtggtgttttgcttcaagatctattggaatgaaacgaag
gcaccatatagctggctgcgatccgcaaatgagcgtcaagtcagtcagagagtcctcaat
acttttctacacgacgaaaccgcctcatccgcctcgagttcgacacaacagagctggtcc
cccttggacttctatgaggcagctcacgtaccacccgccgacgataagcacgcgctttcg
atcgatatccccgaattgacggccaaactttacccttaccagaagaagacaattcaatgg
cttctcggccgggaaggtgttcgttggaggggggcaagcgcggaatcaggctcgaacatt
gaggagctgccccctcctttgggtaccgatatcgcacacagcttccgcaaagttcgaact
gaagggggatccggacaatcattctacgtcagcgacctgtatcatgtcgtcactaccgac
ctgacagcttttcagcaagcagagcgggacatccggggagggattctagctgaagagatg
ggccttggcaagactctcgaagtcatcagcctggtcacgctacatcgccgacccccgacc
gatagtcacattgtcacgcgagagggtgatgagcttctgacaaccggcgcaactttgatc
gttacgccagagtcactaagaaaccaatggatcgcagagcttgcacggcacgcacctcat
ctacgagtcaaattctatccgggacgcaagaatgtcagctttggcactgaggatcatctt
cgtgctgacttggcttcgtacgacgtggtaattgccacatatccagtcttatctgcagag
gtacactttgctttgaaaccccctgacagatctcggcgccaagagagaaaatacgaccgt
ctggtgtcgcccctgacgagaatatcctggtggcgtgtctgtcttgacgaagctcagatg
attgagggtggagtgagcggtgcagctatcgtagcaagagtacttcctcgtgtcaacgtt
tggggcgttactggaacaccggtgaagaacgacgtcaaagatctccacggtttgctcagc
tttctgcgctacgagccctatgcatcatctccgcagatttggaaggctctgacggagtca
cacaagcctctttttaggtctctgttcggaagcattgccttgcgccataccaaacaactt
gtcagacacgaaatcacggtgccgccacagaagcgatacgtcattacattgcccttcacc
gccgtggaggagcaatactacagcgagatgttcaagactatggccaagagttgtggacta
gatctccttggtgcccctgtgaagcccgactggacaccagaaaagaacgagactgagatg
cgaacgtggcttaaccgtttacggcaggcagctctccatcctgaaatcgttcagatacgc
ggcactggtcggaaagtcggacctatgcggacagtcgacgaagtcctggatgctatgatt
gagcaaagcgaaaacgacattcgagccgatcatcgagcctacctacaggccaggcttaca
cgcggccaaatgctcgaaaacagtcctagggtcaaagaggctctcgagatatgggagaag
gtcaaggtggatgctatgaatctcgtcgctgaatgccggcaggaggtgaaagctgccgtg
ggtgtgccattaggggggattcctgccgcagttcaagaaggggacgccagcgatcaaggc
gaagttgatgaaggcgcgacaaatgctcttgttggcgaggctcgcactaaacttcggcat
gctctggaggtccttcataaagccacgttcttctgtgcgaacgccttgttccaaatcaag
agcaacaccgacatgaccgaaccggattcggatgacttcaagaagtaccagaaactcgaa
gacgaagagtacagcaaggctcaggaggtccgacgagagatcttgtcagaaagtcatgct
agagcaatgtcacttatgaacaggctgggacgccaagccgaaacccagtctttcgtcgaa
attccagaacttaccttgagcgggccaaagggactggaaagcgccccgacgcttgacaca
ttggaagaactatatgggatccttaatgagcaggcagatcgcattgatgaatggagagag
gctctcatcagtttgctctgtcaggcactgatcgatgaagaggcggaaaatgatgtcact
ggtgaagagttcaccgactccacgcagattcaagaggaactcatcgtccatgtgcaaatc
ctgcgtgccgccattgctgaccgtcaggacgccatctcagggcttgaaaatgcgctggtc
aggcatgagaccaacgtttcactgactgccgcagagaatggcgatggtccagccccagag
aagtttctggctctcaatgacgccagggattcagtgaagccgtccccagtcaggcatggt
tcacttcgtcgtgccattgccgagttacgagctattgcctcgaggctaccaagggatggc
ggcggtcgggcaagccttgagcacgggattgtgaccaagcagattcaacaaacacaggca
aatatcaccgctcagaccaaagcggccacagctttggaacgagagaccgaccgcttcaca
agtgccatgaatgccagggttgagtactatcgacaactccaggcagtgtcagacagtgtt
gccccctatgaaggccctgatgatggaccggccgtggcttcctgcatcgcgagcgagaat
aattaccgtagaaagctggattcttcaaaggcgaagcacagatatctgctgaatctcaaa
atggacggcggaaagtctaacgagccccgaatgtgcatcatttgccagtcacacttcacc
attggagttctgacagtgtgcggtcatcagttctgcaaagactgtatgaagcattggcat
aaggctcatcataattgccctatgtgcaagaggaagcttcgactcaccgaactccatgat
attactctcaagccaagagagttgaagttacacgatgagaccccagtttctgcctcgcct
ggagtgaagaaagatgaggctgccaaaacaaatggcatctactcccgtttcagcaccgag
aagcttgctcaaatcaatgacattgagttgttgaggatgtcctttgggacaaaggtcgac
tcgattgtcagacatatactatggctaagggaatctgatcctggtgccaagtctgtcatc
ttcacccaatacaaaagtttcctggcaatcttgggcgaagcattcagccgctaccagatc
ggcttctccgcaatcgacaggcccaatggtattatgaagttccagaaagatgctagcatt
gagtgtttcatgcttcatggccgggcaaattcgagtgggctcaacctcgttaacgccagc
cacgtcttcttgtgtgagccgctactgaataccgcgcttgaattgcaggcgattgctcgt
gtagaccgcattggtcagaagaacgagacaaccgtttggttatatttgattgagggctct
gtagaggaatcgatctacaacctgtcggtcaagcgacgcatggaacacatgggtcagaat
tccaaaggaaagtccaaggagtccactcccgaggtccaagagcctaccctggaggctgcg
aatactttggagctagagcaagctcatctcaaccaactgatgagcagggataagaatgca
ggcgaggcggttgccactgacgacctctgggagtgtctatttgggcgtgtgtcccggcga
attacatcaagcgttgcggaggagattgttgccgaggactag
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