KEGG   Clavispora lusitaniae CBS 6936: A9F13_06g01584
Entry
A9F13_06g01584    CDS       T05147                                 
Name
(GenBank) putative DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
clus  Clavispora lusitaniae CBS 6936
Pathway
clus03030  DNA replication
clus03410  Base excision repair
clus03420  Nucleotide excision repair
clus03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:clus00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A9F13_06g01584
   03410 Base excision repair
    A9F13_06g01584
   03420 Nucleotide excision repair
    A9F13_06g01584
   03430 Mismatch repair
    A9F13_06g01584
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:clus03032]
    A9F13_06g01584
   03400 DNA repair and recombination proteins [BR:clus03400]
    A9F13_06g01584
Enzymes [BR:clus01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     A9F13_06g01584
    6.5.1.6  DNA ligase (ATP or NAD+)
     A9F13_06g01584
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     A9F13_06g01584
DNA replication proteins [BR:clus03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    A9F13_06g01584
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     A9F13_06g01584
DNA repair and recombination proteins [BR:clus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     A9F13_06g01584
   NER (nucleotide excision repair)
    Other NER factors
     A9F13_06g01584
   MMR (mismatch excision repair)
    Other MMR factors
     A9F13_06g01584
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DNA_ligase_OB_2
Other DBs
NCBI-ProteinID: OVF09023
UniProt: A0AA91Q0D9
LinkDB
AA seq 750 aa
MEQQSILRFFGSNKGSTQNKRKSDTVSPSPKKSARVEEPTNQDIVKNEGEGSTHPIDQSR
SIDDLRRTEGKVKESIKDEEASKSEESSSDAAELVNEKSDEPIDNIEDASRLIDMSKKNH
QHQQLNPNAKIPYSRLTDVLDKIEKESGRLKITALVSEFLLEVLEQYPSPDNLVRVVYLF
INRLGPDYEPDLELGLGETLLIKAISECYGRSAAKIKKDYHEAGDLGLVAQKSRSGQPTM
FKPAPLDVDTVFENLTKIAKSTGKDSQTRKIGIINKMLTACNMKSSEAKFLIRSLEGKLR
IGLAEKTVLIALAQAFLNFENKTSKKISPEQLTKAENVIREAFSLIPNYEIIIRNAHKYG
ILNLLEHCQLTPGVPLKPMLAKPTKSIGEILDRFQGEEFTCEYKYDGERAQVHLLADGSV
RVYSRNSEDMSERYPDLLSIVKDFIKVTTNSEEKESPKSMILDCEAVAWDREKQKILPFQ
VLSTRKRKDVNESDIKVHICLFAFDLLYYNNESLITKSLEERRSCLFENFKTIEGKFQYA
TYKNSSDLDELQAFLDQSVKDSCEGLMVKMLHGPESFYEPSKRSRNWLKLKKDYLAGVGD
SLDLVVVGAYVGKGKRTGSYGGFLLATYNDDTGEYETTCKIGTGFSDEDLASLYAKLKPT
EISRPKPFYVYDTKNSNAVPDVWLEPTLLFEVLTADLSLSPIYKASHQEYGKGISLRFPR
FIRTREDKGVEDATTSSQIAEFYERQANVN
NT seq 2253 nt   +upstreamnt  +downstreamnt
atggaacagcaatcgatattgagattttttgggctgaataaaggttcgacacaaaacaaa
agaaagagcgacacagtgtcaccgctgcccaaaaaatctgctcgtgtcgaggagccaacg
aatcaagacatagtaaaaaatgaaggcgaaggatccactcatccaattgatcaaagtcgc
ctgattgatgacttacgaagaaccgaagggaaggttaaagagagtatcaaggatgaagaa
gcaagtaagctggaagaaagcagtagtgatgcggctgagctcgtcaatgaaaagagcgat
gaacctatcgataatattgaggatgctagccggcttattgacatgtccaagaaaaaccat
caacatcaacaattgaatccaaatgcaaagatcccatattctcggcttactgacgtattg
gacaaaatcgaaaaggagtcaggccgtttaaaaattactgctcttgtctcagagttcctt
ctagaagtcctagaacaatatccaagtccagacaacttggtacgcgttgtctatcttttc
attaatcgtcttgggcccgattacgaaccggatttggaattgggtcttggcgagactttg
cttatcaaagcgatcagcgagtgttatggtcgtctggctgccaaaatcaaaaaagactat
catgaggctggtgacttgggccttgttgctcagaaatctcgcctgggtcaaccaactatg
ttcaaacctgctcctttggatgttgacacagtgtttgaaaacttaactaaaattgcaaag
tctacgggaaaggactcgcaaacaagaaagattggcatcataaacaaaatgctcacggct
tgtaacatgaaaagcagcgaagcaaagtttctaatcagatcattggagggaaagttacgt
attggattggccgagaagactgttttaatcgcattagctcaagcgttcttgaattttgag
aacaagacatctaagaaaattctgcctgaacagcttacgaaggcggagaacgtgattcgt
gaggccttttcattgatacctaattacgagatcataatcagaaacgcccacaagtatggg
attctcaacttattagagcattgccaattaactccgggtgtccccctcaaaccaatgtta
gctaaaccaaccaaatctatcggagagattttggatagatttcagggtgaagaatttact
tgtgagtataaatatgacggggaaagagcccaggttcatctactcgctgatggaagcgtc
agagtttactcccgtaattcagaggatatgtcagagagatatccggatttgctttcgatt
gtgaaggatttcatcaaagttacaactaatctggaagaaaaggagtctccaaagtctatg
attttagattgcgaagctgtcgcctgggatagagagaagcaaaaaattcttccctttcaa
gtcttgtcaactagaaaacggaaagatgttaatgaaagtgatattaaggtgcatatttgc
ttattcgcattcgatttgctatactacaataatgagtctcttatcacgaagtcgttagag
gagagaagaagctgtcttttcgaaaacttcaaaaccatagaagggaagtttcagtacgca
acatataagaactcatcggacctagatgaacttcaagcatttctagatcaatcagtgaag
gattcatgtgaaggcttgatggtaaaaatgttgcatggtcctgagtctttttatgagcct
tcaaagagatcaagaaattggttgaaattgaaaaaggattacttggccggtgtgggtgat
tccctagacttagtggttgtcggagcttatgttggtaaaggtaagagaacgggatcttat
ggtggctttttattggcgacttataatgatgatacgggagaatacgaaaccacctgcaag
attggaacagggttttctgacgaggacctcgcgtcgttgtacgctaaattgaaaccaacg
gagatttctaggcctaagcctttctacgtttacgacacaaagaattctaatgctgttcca
gatgtatggcttgagccaaccttgctctttgaagttttgactgcggatctctctttgagt
ccgatttacaaagcatctcatcaagagtatggtaaaggtatttccttgagatttccacga
tttatcagaactagagaggataaaggtgttgaagatgccactacgtctagccaaatcgca
gagttttacgagaggcaggcaaacgttaattag

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