Columba livia (rock pigeon): 102084896
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Entry
102084896 CDS
T02912
Symbol
TRIM25
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin/ISG15 ligase TRIM25
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04622
RIG-I-like receptor signaling pathway
clv05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
102084896 (TRIM25)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102084896 (TRIM25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clv04121
]
102084896 (TRIM25)
Enzymes [BR:
clv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102084896 (TRIM25)
Ubiquitin system [BR:
clv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102084896 (TRIM25)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-B_box
zf-RING_4
AHH
CATIP_N
PDCD2_C
Motif
Other DBs
NCBI-GeneID:
102084896
NCBI-ProteinID:
XP_021144330
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MAALTRELSEPGMAGLEEELTCSICLCLFSSPVTIPCGHNFCASCLELTWAGLAGNFSCP
QCRATFAGRPQLQKNTVLCRVVEQLQGCAGAKAEAEAEEQVVRYEEDTSPILCDSCQQAP
AVQTCLTCTASFCPEHLRPHRDSPAFRDHQLCPPLRDLQQRKCPQHNKLFEFFCSQHGSC
ICSLCLLGHKLCHTSPLQMAKANFESVLKKRLVELHNQSEKTARAMNLVKTRQNQVTEAA
SRKTDLIRIEFSEIKALIEERENQTLKVIADEEKRVSNKCDYIYGILTSKKNEIQSLRDQ
IEMALTEGDDILFLKRAASLQRTSTKDAYVPAIDMDQNLIHSTYQSAINLKDVVKLSVTQ
CREARAEAKLTPEKTRPRPAPSPNRAAVQKKPLAPHHTRREKPLHHTQATSQTEADTNKK
KKADKVAPAPAAPAPQPQPPQPAPAPAAPAPAAPAAAAAVATKELLDSFLKKSREELLQY
AANITLDYNTANNKVMLSERYTKMSVSDTPLNYNHHPQRFTDYSQVLGFQCFRRGIHYWE
VELQKNSFCGIGICYGSMDRQGPGGRRGWCIEWLNTKISSWHNDVEKCLPSTKATKIGVL
LHCEGGLVIFLAVGEKHNLIYKFKTQFTEALYPAFWVFSSGAVLSLCEMK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgctgacccgggagctgtccgagccggggatggcggggctggaggaggaactg
acctgctccatctgcctctgcctgttcagcagccccgtgaccattccctgcgggcacaac
ttctgcgcctcctgcctggagctcacctgggccgggctggcggggaacttcagctgcccg
cagtgccgcgccaccttcgcgggccgcccgcagctgcagaagaacacggtgctgtgccgg
gtggtggagcagctccagggctgtgccggggccaaagctgaagccgaagccgaggagcag
gtggtgagatatgaggaagacacatcccccatcttgtgcgacagctgccagcaggccccg
gccgtgcagacctgcctgacctgcaccgcatccttctgccccgagcacctgcggccccac
cgggacagcccggccttccgcgaccaccagctctgtccgcccctgcgtgacctgcagcag
cgcaagtgtccgcagcacaacaagctcttcgagttcttctgcagccagcatggcagctgc
atctgctccctctgcctgctggggcacaagctgtgtcacaccagccccctgcagatggcc
aaagccaacttcgagtcggtgctgaagaagagactggtggagctgcacaatcagagtgag
aagactgctcgagcgatgaaccttgtgaaaacgaggcaaaaccaagttactgaggcggct
tccagaaagactgatttgatcagaattgagttttcggaaattaaagctctaattgaagaa
agagaaaatcagaccttaaaagtaatcgcagatgaagaaaaaagagttagcaacaagtgt
gattacatttatggcattctgacaagtaagaagaatgaaattcagtctctcagagatcag
attgagatggcactgactgaaggtgatgacattctgtttttgaagagagcagcatcactg
caacgaacatcaacaaaagatgcttatgttcccgcaattgatatggaccagaacttgata
cattccacttaccagtctgccattaaccttaaagatgtggtgaagctttcagtgactcaa
tgcagggaggcgagagcagaagcaaaactaacacctgagaaaacgaggccccgtccagcg
ccttctccaaacagagccgctgttcagaaaaagcctctggcaccgcaccatacccgcaga
gagaaaccccttcaccacactcaagccacttcacagacagaggcagataccaacaagaaa
aagaaagctgataaagtggcaccagccccagcagcaccagccccacagccccagccgccc
cagccagcaccagccccagcagcaccagccccagcagcaccagctgctgcagctgccgtt
gcaactaaagagcttcttgacagctttctgaagaaatccagagaggagcttctgcagtat
gctgctaacatcacactggattacaacacagctaataacaaagtgatgctgtctgagaga
tataccaagatgtctgtttcagacacccccctgaattacaaccaccaccctcagcgcttc
accgactattcccaagtgctggggttccagtgcttcaggagaggcatccactactgggag
gtggaactgcaaaagaacagcttctgcggcatcggcatctgctacggcagcatggaccgg
caggggcccgggggccgccgggggtggtgtattgagtggcttaacaccaaaatatcatcc
tggcacaatgatgttgagaagtgcttacccagtacaaaggctactaagattggtgtgctg
ctccactgtgagggaggccttgtgattttcctggctgtcggggagaagcataacttgatc
tataaattcaaaacccagtttactgaagccttgtaccccgccttctgggtgttttccagt
ggcgctgtcctctctctgtgtgaaatgaaatag
DBGET
integrated database retrieval system
