Columba livia (rock pigeon): 102086078
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Entry
102086078 CDS
T02912
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04010
MAPK signaling pathway
clv04210
Apoptosis
clv04218
Cellular senescence
clv04620
Toll-like receptor signaling pathway
clv04621
NOD-like receptor signaling pathway
clv04622
RIG-I-like receptor signaling pathway
clv04623
Cytosolic DNA-sensing pathway
clv04625
C-type lectin receptor signaling pathway
clv04920
Adipocytokine signaling pathway
clv05132
Salmonella infection
clv05164
Influenza A
clv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102086078 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
102086078 (NFKB1)
04218 Cellular senescence
102086078 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102086078 (NFKB1)
04621 NOD-like receptor signaling pathway
102086078 (NFKB1)
04622 RIG-I-like receptor signaling pathway
102086078 (NFKB1)
04623 Cytosolic DNA-sensing pathway
102086078 (NFKB1)
04625 C-type lectin receptor signaling pathway
102086078 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
102086078 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102086078 (NFKB1)
05168 Herpes simplex virus 1 infection
102086078 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
102086078 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clv03000
]
102086078 (NFKB1)
Transcription factors [BR:
clv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
102086078 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
102086078
NCBI-ProteinID:
XP_021138719
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MWPFKINPLGLKMAGEDSYIMSDPQMFTMDQFMGMNALFNNTNYITSDLPLRTADGPYLQ
IIEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKY
VHLHAHSLVGKFCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVFETLEARMIDACKKGY
NPGLLVHPELGYLQADACGDRQLTEREREIIRQAAVQQTKEMDLSVVRLMFTAFLPDSNG
SFTRKLDPVISDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFY
EEDENGGMWEGFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPK
PFLYYPEIKDKEEVQRKRQKLMPNFSDGYGGGSGAGGGGMYGGGGGGAGSGFSYPSYGYS
AFGGMHFHPGTTKSNAGMKHELSNSTADQDGKSSDKQSDKWDTKHEMKMENLEKNECRTS
GENEEDAAASCKTEVNEADCRWQDGLFLEKAMQLAKRHCNALFDYAVTGXXXXXXXXXDD
NGDNVLHLAIIHLHTELVKNLLEVIRDLNSNDIINMRNDLYQTPLHLAVITKQAEVVEDL
LRAGADVSLLDRHGNSVLHLAAAEGDDKILSVLLKHKKILSMVDLSNGEGLSAIHMAVMA
NSMSCLKQLIAAGVNVNAQEQKSGRTALHLAVEHENIPLAGCLLLEGDADVDSTTYDGTT
PLHIAAGRGSTKLAAVLRAAGADPHIENFEPLFDLDDVKDDEDDDEGIVPGTTPLDMAAN
CEVYDILNGKPYEATVVSEDLLPQGHLKELNESSRMQLCKLLEAPDPEKNWSTLAQKLGL
GILNNAFRLSPSPSKTLLDNYEVSGGTVQELIAALKQMDHTEAIEIIRKALSISHSPSQQ
QDNTAKALPLSSPPTSANRETGELYNSKFQDPESTCDSGVETSFRKLSFTYSDSLNSKSS
VTLSKMTLDYGHGSSAQSNYIAN
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgtggccttttaaaataaatccactaggacttaaaatggcaggagaagattcctatatt
atgtccgatccccagatgtttacaatggatcagttcatgggaatgaatgcgttattcaat
aatacaaattacatcacttcagacttaccactacgaacagcagatggaccctatcttcaa
atcatagaacagccaaaacagagggggtttcgttttcgatatgtatgcgaaggcccttca
catggtgggcttcctggtgcttctagtgaaaagaacaaaaagtcataccctcaggtcaaa
atctgcaattatgttggacctgcaaaagtaatcgtccagttagttactaatggaaaatac
gtccacttacatgctcacagcttagtgggtaaattttgtgaagatggagtatgcactgtt
aatgcaggacctaaagatatggttgtggggtttgcaaatcttggaatacttcatgtcaca
aagaagaaagtgtttgaaactctggaagcacgcatgatagacgcttgcaaaaagggatac
aacccaggactcctggtgcatcctgaacttggctatctgcaggcagatgcgtgtggagac
agacagctaacggaacgagaaagagaaattattcgtcaggcagccgtacaacagactaaa
gaaatggatctcagtgtggtgcgtcttatgtttacagcctttctccctgacagtaatggt
agtttcacgcggaaactcgatcctgttatatcagatgcaatatatgacagcaaagctccc
aatgcctccaacctaaaaattgtaagaatggacagaacagcagggtgtgtaacaggaggg
gaagagatttaccttctctgtgacaaggttcagaaagatgatattcaaatacgtttctat
gaagaggatgagaatggaggtatgtgggaaggctttggagacttttctcctacagatgta
cataggcagtttgctattgtgttcaaaacacccaagtatcgagatgtcaatatcacaaag
ccagcatctgtatttgtacaactgcggaggaaatctgatctagaaacaagcgaaccaaag
ccttttctctactatccagaaatcaaagataaagaagaagtgcaaaggaaacgacagaag
ctcatgccgaacttctccgatggctatggtggtggcagcggtgcaggaggtggtggcatg
tatggagggggtggtggcggtgctggctctgggttcagttatccttcatatggatactct
gcgtttggagggatgcatttccaccctggcacaacaaagtctaatgctggaatgaaacat
gaactatcaaatagcacagctgatcaagatgggaagagttctgataagcaaagtgacaaa
tgggacacaaaacatgaaatgaaaatggaaaatctggagaagaacgagtgcagaacctct
ggtgaaaatgaggaggatgctgctgcttcctgtaaaactgaagtaaatgaagcagattgc
cggtggcaggatggtctgttcctggagaaggccatgcagcttgccaagcgtcactgcaat
gctctctttgattatgctgtaactggagnnnnnnnnnnnnnnnnnnnnnnnnnggacgat
aatggagacaatgtccttcatttagcaattatccaccttcatactgagctggtgaaaaac
ctcttggaagtgattcgtgatctgaattctaatgacatcattaacatgagaaatgacctt
tatcagacccccttgcacctggcagtgatcaccaagcaggcagaggtggtagaagacttg
ctgagggccggagcagatgtcagccttctggatcgccatggcaattccgtcttacattta
gctgctgctgaaggagacgacaagattttgagtgtgctcctcaagcacaagaagatctta
tcaatggttgacctttccaacggtgaaggtctcagcgcaattcacatggcggtgatggca
aacagcatgtcctgcctcaagcagctgattgctgctggtgttaacgtcaatgctcaggaa
caaaaatctggacgaactgcattgcatttagctgttgaacacgagaacatccctttggca
ggctgccttttgcttgagggcgatgcggatgtggacagcactacgtacgatgggacaact
cctctgcacatagcagctggaaggggctctacaaaactggcagccgtcctcagagcagca
ggtgcagatcctcacattgagaacttcgagccattgtttgatctagatgatgtgaaagat
gatgaagatgacgatgaagggatcgtgcctggaacaacaccgctagatatggcggccaac
tgtgaggtgtatgacatattaaatggcaaaccctatgaggcaacagtggtttcagaggac
ttactgccacaagggcatttgaaagagctgaatgagagttccagaatgcagctttgcaaa
ctactggaagcacctgatccagagaaaaactggtccactctagcacaaaaactgggtctt
ggcatacttaacaacgccttcaggttgagcccttccccatcaaaaactctgctagataac
tacgaggtttctggtggtacagttcaagagttgattgctgctttgaaacaaatggatcac
acagaagccattgaaataattcgaaaagcactgtccatctcacacagcccatctcagcag
caggacaatacagcgaaagctcttccgttgtcatcgccacccacctctgcaaacagagag
acaggcgagctttacaatagcaaatttcaagaccccgaaagcacgtgtgacagcggcgtg
gagacctccttccgcaaactgagcttcacctactcagactctctgaacagcaagtcatca
gtaacactgagcaaaatgacactggactacggccatggaagttcagcgcaaagtaattac
atagccaactag
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