Columba livia (rock pigeon): 102087054
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Entry
102087054 CDS
T02912
Symbol
COL8A2
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
clv
Columba livia (rock pigeon)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
102087054
NCBI-ProteinID:
XP_021153161
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MLPDAAVLLGMLVLVLGLRSAAGGGAGGYGQVKYMQPMVKGPLGPPFREGKGQYLDMPPL
LPMDKGEPGPPGKPGPRGPPGPPGYPGKPGTGKPGMHGQPGPAGPPGFSGIGKPGIPGLP
GKAGMKGMPGAKGEPGMRGEQGPRGLPGPPGLPGPAGISVNGKPGPQGGPGLPGFRGEPG
PKGEPGPRGERGMKGENGVGKPGLPGPRGNGGPPGPAGPPGPVGVGKPGLDGLPGAPGEK
GDMGPPGGPGVSGEPGPAGPRGPPGIDGIGVPGVAGVPGIQGPTGPKGEPGIRGLPGLPG
PTGYGXXXXXXXXXXXXXXXXXXXXXXXDKGEPGVDGELGEPGPAGIIGPPGLPGSMGLP
GKHGLPGPKGDVGPSGPPGMPGMRGDQGLNGFAGKPGVPGERGLPGSQGPPGPVGPKGEP
GFIGLPGVPGLTGGPGPKGDGGIPGQPGLRGPSGIPGLQGPAGPMGPQGIPGLKGEPGLP
GVPGEGKTGEPGMAGPIGXXXXXXXXXXXXXXGAVLGNGKPGKPQYGRGELAARIAPAFT
AILTSPFPASGMPVKFDRTLYNGHNGYNPVTGIFTCPVSGIYYFAYHVHVKGTNVWVALY
KNNVPATYTYDEYKKGYLDQASGSAVLELKENDQVWVQMPSDQANGLYSTEYIHSSFSGF
LLCPT
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgctgccggacgccgcggtgctgctggggatgctggtgctggtgctcggccttcgctcg
gcggcaggaggaggcgctgggggctacggccaagtcaagtacatgcagcccatggtgaag
ggacccctgggacccccgttccgcgagggcaaagggcagtacctggacatgccgccactg
ctgcccatggacaaaggggagccaggaccgccagggaagcccggcccgcgtggacccccc
ggcccccccggctacccaggaaagccgggcacggggaagccaggaatgcacggccagcct
gggccggccgggccccccggcttctccggcatcgggaaacccggcatccccgggctcccc
ggaaaggcgggtatgaaagggatgccaggagccaagggcgagcctggcatgcggggagag
caagggccacggggactgcccggccccccggggctgccagggcccgctggcatctcggtc
aatgggaagccaggtccccagggcggccccggcctgcccgggttccggggtgagcctggc
cccaaaggagagccgggtccccgcggagagcgagggatgaagggtgagaacggcgtgggg
aagccggggttaccggggccccgggggaacgggggccctcccggccctgcagggccccca
gggcccgttggcgttggcaaacccggccttgacgggctgccgggcgcaccgggggagaag
ggggacatgggccccccgggcgggcctggcgtcagcggggagcccggccccgcggggccc
aggggcccccccggcatcgacgggatcggtgtcccaggcgtcgcaggggtgccagggata
cagggccccacgggaccgaagggagagccagggatccgtggcctccccggtttgccgggc
ccaacgggctacgggaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnncgataagggcgaacccggcgtcgatggagagctgggt
gagcctggccctgctggcatcatcgggccgccggggctgccggggtccatgggtctgccg
ggcaagcatgggctacctggcccgaaaggggacgtggggccaagcgggccccccgggatg
ccggggatgcgcggggaccagggcctgaacggcttcgcggggaagccaggggtgccggga
gagaggggcctgcctgggtcacagggaccccctggcccagtgggccccaaaggagaaccg
gggttcatcggtctcccgggggtgcccggattaacgggcggccccgggcccaaaggggac
ggtgggatcccagggcagccggggctgcggggcccctccggcatcccaggcttgcaagga
cccgctggtcccatggggcctcaggggataccggggctgaaaggggagcccgggctccca
ggggttcctggtgaggggaagacgggcgagcccggcatggccggacccatcggnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagggcgccgtgctgggcaacggcaag
ccggggaagccgcagtacggccgcggagagctcgccgcccgcatcgcgccggcattcacc
gccatcctcacctcccccttcccggcgtcgggcatgccggtcaagttcgaccggactttg
tataacgggcacaatggctacaacccggtcaccgggatattcacctgccccgtatccggc
atctactactttgcctaccacgtgcatgtcaaagggactaacgtctgggtggctctttat
aagaacaacgtccccgccacctacacctacgacgagtacaaaaagggctacctggaccag
gcctcgggcagcgccgtgctcgaactcaaggagaacgaccaagtctgggtacagatgccc
tcggaccaggccaacgggctgtactccacggaatacatccactcctccttctccgggttc
ctgctttgccccacataa
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