Columba livia (rock pigeon): 102087419
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Entry
102087419 CDS
T02912
Symbol
POLB
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102087419 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clv03400
]
102087419 (POLB)
Enzymes [BR:
clv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102087419 (POLB)
DNA repair and recombination proteins [BR:
clv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
102087419 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
102087419 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
HHH_5
NTP_transf_2
HHH_2
Cdd1
ExoX-like_C
Motif
Other DBs
NCBI-GeneID:
102087419
NCBI-ProteinID:
XP_005510960
UniProt:
A0A2I0LJJ2
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MEEATEEASCAPCEAKRKAGCRQLSSSGQAAAERLGGPRRGSQKQGRPGGRAGTVCGQAV
FSGGVRARASGFAELANYERNVNRAIHKYNAYRKAASVISRYPSKIRSGAEAKKLDGVGA
KIAEKIDEFLSTGKLRKLEKIRQDDTSASINFLTRVTGIGPAAARKFVEEGIKTLEDLRR
NEHKLTHHQRIGLKYFEDFEKRIPREEMLQMQEIVLKEVQKLDPNYIATVCGSFRRGAES
SGDMDVLITHPSFTSDSSKQSRLLHQVVEQLEKVHFVTDMLSKGDTKFMGVCQLPDKEDG
TAYPHRRIDIRLVPKDQYYCGVLYFTGSDIFNKNMRAHALEMGFTINEYTIRPLGVTGVA
GEALPVESEEDIFDYIQWKYREPKDRSE
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggcgacggaggaggcgagctgtgcgccgtgcgaagcgaagaggaaagcgggc
tgtcggcagctcagctcctcgggccaggcggcagctgagcgtctcggcggtccgcggcgt
ggcagtcaaaagcaagggcggccgggtgggcgagctgggaccgtctgcgggcaggctgtg
ttttcgggcggcgtccgagcgcgtgcctctggttttgcggagctggccaattacgagcgc
aacgtgaaccgtgccattcacaagtacaacgcgtacaggaaagccgcctcggttatttcc
cggtacccgagcaagatacggagcggggccgaagccaagaagctggatggagtaggtgct
aaaatagctgagaagatagatgagttcttatccactggaaaactacgcaaattggaaaag
attcgacaagatgatacaagtgcatctatcaatttcctgacacgagttactggcattggt
cctgctgctgctaggaagtttgtcgaggaaggaattaagactttagaagatctaagaaga
aatgagcacaagctgacccatcaccagcggatcgggctaaaatattttgaagattttgag
aaaagaatcccaagggaagaaatgctgcaaatgcaggaaattgtgctgaaagaggtacag
aagctggacccaaactatattgctacagtctgtggcagttttagacgaggcgcagagtca
agcggtgatatggatgttctcataacccatccgagtttcacatctgactcatccaaacag
tcaagacttctgcaccaagttgtagaacaactggaaaaagtccactttgtcacagatatg
ctgtctaaaggtgacaccaaattcatgggtgtctgtcagctgccagataaagaagatgga
acagcctatccacacaggagaattgatatccggcttgtccccaaagatcagtattactgt
ggtgtactgtatttcacaggaagtgatatattcaataagaacatgagagctcatgcactg
gaaatgggcttcacgatcaatgagtacacaatccgtcccttgggtgtcaccggagtggcc
ggggaggccctaccagtcgaatccgaggaagacatctttgattatatccagtggaaatac
cgagagccaaaggaccggagtgaataa
DBGET
integrated database retrieval system
