Columba livia (rock pigeon): 102092022 Help Entry 102092022         CDS       T02912                                  Symbol COL1A1 Name (RefSeq) collagen alpha-1(I) chain   KO K06236   collagen type I alpha Organism clv  Columba livia (rock pigeon) Pathway clv04510   Focal adhesion clv04512   ECM-receptor interaction clv04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:clv00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102092022 (COL1A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     102092022 (COL1A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102092022 (COL1A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:clv00536]     102092022 (COL1A1) Glycosaminoglycan binding proteins [BR:clv00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102092022 (COL1A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWA_N2 Motif Other DBs NCBI-GeneID:  102092022 NCBI-ProteinID:  XP_021136665 LinkDB All DBs Position Unknown AA seq 1254 aa AA seqDB search MCTYVHAGFYVAVVLERWEKRCRREGGGRARAGAGPCGRPLPCPPPSRSPCPAPSLPVQT GSCVQDGLTYNDKDVWKPEACQICVCDSGNILCDEVICEDTSDCPNAEIPFGECCPICPD TDASPVYPESAGVEGPKGDPGPKGDRGLPGPPGRDGIPGQPGLPGPPGPPGPPGLKKSLA VQTPQGYLRPLTPLSLPLQNFAPQMSYGYDEKAGGMAVPGPMGPAGPRGLPGPPGAPGPQ GFQGPPGEPGEPGASGPMGPRGPAGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTA GLPGMKGHRGFSGLDGAKGEPGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGPSGPA GARGNDGAPGAAGPPGPTGPAGPPGFPGAAGAKGETGPQGARGSEGPQGARGEPGPPGPA GAAGPAGNPGADGQPGAKGATGAPGIAGAPGFPGARGPSGPQGPSGAPGTGWCWGLRVPP AGAPGSRGFPGADGIAGPKVGARVSLLFGASPANPVREEPPVPPALWVPLAKTVKLEPKV PPAQPVPLEKEVNKVPLVLPASRVCRAPLAPPARLASPASSAPGPAGARGERGFPGERGV QGPPGPQGPRGANGAPGNDGAKGDAGAPGAPGGQGPPGLQGMPGERGAAGLPGAKGDRGD PGPKGADGAPGKDGLRGLTGPIGPPGPAGAPGDKGEAGPPGPAGPTGARGAPGDRGEPGP PGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPTGAPGPAGAVGAPGPKGARGS AGPPGATGFPGAAGRVGPPGPSGNIGLPGPPGPSGKEGGKGPRGETGPAGRPGEPGPAGP PGPPGEKGAPGADGPIGAPGTPGPLMHVMPSAAAPGGMLSVTPPGLSAPQGEPGKQGPSG SPGERGPPGPMGPPGLAGPPGEAGREGAPGAEGAPGRDGAAGPKGDRGETGPAGPPGAPG APGAPGPVGPAGKSGDRGETGPQGPAGPPGPAGARGPAGPQGPRGDKGETGEQGDRGMKG HRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAAGKDGLNGLPGPIGPPGPRG RTGDVGPVVRISPFATTCQSCPPCEYWIDPNQGCNLDAIKVYCNMETGETCVYPTQATIA QKNWYLSKNPKEKKHVWFGETMSDGFQFEYGGEGSNPADVAIQLTFLRLMSTEASQNVTY HCKNSVAYMDQDSGNLKKALLLQGANEIEIRRRPAPGAAPPPEGYLTPRSAAGL NT seq 3765 nt NT seq  +upstreamnt  +downstreamnt atgtgcacatacgtgcatgcaggtttctacgtggccgtggtgctggagcgctgggagaag cgctgcaggcgcgaggggggagggagggcgagagcgggagcagggccgtgcgggaggccg ctgccgtgccccccaccctcacgctccccctgccctgccccgtctctcccagtccaaact gggagctgcgtgcaggatggactgacgtacaacgacaaggatgtgtggaaaccagaagcc tgccagatctgcgtctgcgacagtggcaacatcctctgcgacgaggtgatctgcgaggac acctcggactgccccaacgccgagatccccttcggagagtgctgccccatctgccccgac accgacgcctcccctgtgtacccagagagcgctggagtggagggccctaagggagaccct ggccccaaaggagacaggggactgcccggcccccccggcagagatggcatccctggacag cctggcctcccgggacccccaggccctccaggacccccaggcctaaaaaagtccctggcg gtgcagaccccacaggggtatctgcgccccctcaccccgctctccctcccgctgcagaac ttcgctcctcaaatgtcttatggctatgacgagaaagccggcggcatggccgtgcccggc cccatgggcccagctggtccccgtggtctccccggcccccctggcgccccgggtcctcaa ggtttccaaggtccccctggtgaacccggagaacctggtgcttctggtcccatgggtccc cgtggtcccgccggcccccctggcaagaatggagatgatggtgaagctggaaaacccggc cgtcccggagagcgcggcccccccggcccccagggtgcgcggggtctccccggaactgct ggtctgccaggcatgaagggtcacaggggtttcagcggtctggacggtgccaagggtgag ccaggtcccgctggccccaagggcgagcccggcagccccggcgagaacggagcccccggg cagatgggtcctcgtggtcttcccggtgagagaggccgtcccggtccctccggccctgct ggcgctcgcggtaatgacggtgctcccggtgctgctggtccccccggtcccaccggcccc gctggtccccccggcttccccggtgctgctggtgccaagggcgagactggtccccagggt gctcgtggcagtgaaggtccccagggtgctcgcggcgagcccggcccccccggccctgcc ggcgctgctggtcctgctggcaaccccggtgctgacggtcaacctggtgccaagggcgca actggcgctcctggcatcgctggtgctcccggcttccccggtgcccgcggcccctctggc ccccagggtcccagcggcgcccccggcacgggatggtgctgggggctgagggtccccccc gcgggtgctcccggcagccgtggtttccccggtgctgatggcatcgccggtcccaaggtg ggtgcccgcgtctccctcctgtttggggcgagcccggcaaacccggtgagagaggagccc ccggtccccccggcgctgtgggtcccgctggcaaagacggtgaagctggagcccaaggtc cccccggcccaaccggtcccgctggagaaagaggtgaacaaggtcccgctggtgctcccg gcttccagggtctgccgggccccgctggcccccccggcgaggctggcaagcccggcgagc agtgcccccggtcccgccggtgccagaggcgagagaggtttccccggtgaacgcggcgtc caaggcccccccggtccccaaggtcctcgtggtgctaacggtgctcccggtaacgatggt gctaagggcgatgctggtgctcccggtgcccccgggggtcagggtccccccggtctgcag ggaatgcccggagaacgcggtgctgccggcctgccaggcgccaagggtgacagaggcgac cctggtcccaaaggtgctgacggcgctcctggcaaagacggtctccgtggtctgacgggc cccatcggcccccccggccccgccggtgctcctggtgacaagggtgaagctggtcccccc ggtcctgctggtcccactggtgcccgtggtgctcctggtgaccgcggcgagcccggccct cctggtcctgctggatttgctggcccccccggtgccgacggccagcctggtgctaaaggt gaacctggtgatgctggagccaaaggtgacgccggcccccccggccctgccggccccact ggcgctcctggccctgctggtgctgttggtgctcctggtcccaaaggtgctcgtggcagt gctggacctcctggtgctactggtttccctggtgctgctggaagagttggtccccctggc ccctctggaaacatcggcctccccggcccccccggtcccagcgggaaggaaggtggcaaa ggaccccgcggtgaaactggccccgctggccgccctggtgagcccggccctgctggtccc cccggcccccccggtgagaagggcgctcccggcgctgatggccccatcggcgcccccggc acccccggacccctcatgcatgtgatgccctcggccgcggccccgggcgggatgctcagt gtgacaccccccggcctctccgctccgcagggtgaacctggcaagcaaggtccctccggc tcccctggcgagcgcggaccccccggccccatgggcccccctggcctggctggaccccct ggtgaagctggacgtgagggtgctcccggtgctgaaggtgcccctggtcgtgatggtgct gccggtcccaagggtgaccgtggtgagactggacccgccggcccccctggtgctcccggt gcccccggtgcccctggccctgtcggtcctgctggcaagagcggagatcgcggtgagacc ggtccccaaggtcctgctggcccccctggtcctgctggagctcgtggtcctgctggtcca caaggtccccgtggtgacaaaggtgaaactggcgaacagggtgacagaggcatgaagggt cacagaggcttctccggtctccagggcccacctggtcctcctggctctcctggtgaacaa ggtccttctggtgcttctggtcctgctggtccgcggggtcctcctggctccgctggtgct gccggcaaagacgggctcaacgggctgcccggccccatcggcccccctggcccccgcggt cgcaccggtgatgttggccccgtcgtacgtatcagcccctttgccaccacctgccagagc tgcccgccttgtgaatactggatcgaccccaaccagggctgcaacctggacgccatcaag gtctactgcaacatggagacgggcgagacctgcgtctaccccacccaggccaccatcgcc cagaagaactggtacctcagcaagaaccccaaggagaagaagcacgtctggttcggcgag acaatgagcgatggcttccagttcgagtacggtggtgagggctccaaccccgccgacgtc gccatccaactgaccttcctgcgcctgatgtccaccgaggcgtcccagaatgtcacctac cactgcaagaacagcgtcgcctacatggaccaggacagcgggaacctgaagaaagcgctg ctgctgcagggagccaacgagatcgagatccggcgccgccccgcgccgggagcagccccc cctccggaaggctacctcaccccccgctccgctgcggggctatag

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