Columba livia (rock pigeon): 102092658
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Entry
102092658 CDS
T02912
Symbol
COL21A1
Name
(RefSeq) collagen alpha-1(XXI) chain
KO
K16629
collagen type XXI alpha
Organism
clv
Columba livia (rock pigeon)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
VWA_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
102092658
NCBI-ProteinID:
XP_021149165
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MAQIRTFFQILLSLLLHDYISAEDGETRASCRTAPADLVFILDGSYSVGPENFEIIKSWL
VNITRNFDIGPKFIQVGVVQYSDYPVLEIPLGTHESTENLIREMESIHYLGGNTRTGRAI
QFAYDHLFAKSSRFLTKIAVVLTDGKSQDEVKDVAAEARKNKITLFAIGVGSEIEEDELK
AIANKPSSTYVFYVEDYIAISRIKEVIKQKLCEESVCPTRIPVAARDEKGFDILVGLGVK
KKVKKRIQIPTTNAKAYEVTSRVDLSELTRNVFPEGLPPSYVFVSTQRFKVKKTWDLWRI
LSLDKRPQIAVTINGEEKTLSFTTTSLMNGTQVITFSAPRVKTLFDEEWHQIRLLVTEDF
VTLYIDDQAIETKPLHPVLGIYISGLTQIGKYSGKEETVQFDIQKLRIYCDPEQNNRETV
CEIPGFNGECMNGPSDVGSTPAPCICPPGKQGPPGPKGDPGQPGNHGYPGQPGPDGKPVS
TENLVTYCKCKTNRRKNMYCQLKMETVTLILRKSGPRGLPGIKGEPGKDGAKGDRGLPGF
PGLHGMPAPKGERGPKGDQGVPGIYGKKGSKGEKGDTXXXXXXXXEDNLGDPGRSGKDGL
PGSPGFKGEVGQPGPPGLEGHRGEPGIPGIPGNQGAKGQKGEIGPPGQPGAKGSTGDTGL
MGPEGSFGLPGAPGPKGDKGEPGIQGKPGSSGAKGDLGVPGAPGEPGLPAVPGTSPIQGD
KGNQGESGIQGLKGEKGRQGNPGLQGVEGPSGEQGEKGEKGDPGIRGINGQKGESGIQGL
VGPPGLRGQPGDRGPPGPPGSDGKPAREFSEEFIRQVCSDVLRTQLPAILQSGRLQSCNH
CQSQSASPGLPGPPGPRGPEGPRGFPGLPGNDGVPGLTGIPGRPGARGTRGLPGKNGAKG
NQGIGVPGIQGPPGPPGPEGPPGMSTEGRPGERGPPGKDGDRGSPGMPGPVGPPGICDPS
LCFSVIVGRDPFRKGPNY
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcacagatcagaacattttttcagatacttttaagtctattacttcatgattacatc
tcagctgaagatggggaaacaagagcaagttgcagaactgctccggcagatttagttttt
atcttagacggctcttacagtgttggcccagaaaactttgaaatcatcaaaagctggctt
gtcaatattacaagaaattttgacatagggccaaagtttattcaagttggagttgtccag
tacagtgattaccctgtacttgaaattccccttggaactcatgaatccactgagaacctc
atcagggaaatggaatccatacactacttgggaggaaatacaagaacaggaagagctatt
cagtttgcctatgaccatctttttgcaaaatcttcaagatttttaacaaaaatagcagtt
gttctcactgatggaaaatcccaagatgaagtcaaagatgtagcagcagaagcaaggaaa
aataaaatcactttgtttgctattggtgttggctcagaaattgaggaggatgaacttaaa
gccattgccaataagccttcatcaacttacgtattttatgttgaagattatattgcaata
tcaagaattaaagaagttataaagcagaaactctgtgaagaatctgtttgtccaacaaga
attccagtggcagctcgagatgaaaaaggatttgacattcttgtaggattaggtgtgaag
aaaaaggttaaaaagagaattcaaataccaactactaatgcaaaagcttatgaagtcact
tcacgtgttgacctgtcagaactgacgaggaatgtgtttccagaaggtctgcctccatcc
tatgtgtttgtttccactcaaagatttaaagtaaagaagacgtgggatttgtggagaatt
ctaagtctggataagagaccacaaatagcagtcactattaatggggaagagaaaacatta
tcattcactacaacaagtttaatgaatggcacacaagttattactttttctgcacctcgt
gtaaagacattatttgatgaagaatggcatcaaatccgtctcctagtaacagaggacttt
gtaacattgtatatagatgatcaagcaattgaaaccaagccattacaccctgttttaggt
atttacatcagtggcctaacgcaaataggaaagtattctggaaaggaggaaactgtacag
tttgatatacaaaaactgagaatctactgtgacccagagcaaaataatcgagaaacagtc
tgtgagatcccgggatttaatggagagtgcatgaacggccctagtgatgtaggctcaacg
cctgccccctgcatatgcccaccaggaaaacaaggacctccaggccccaaaggtgaccct
gggcagcccgggaatcatggttatcctggtcagcctggtccagatggtaagcctgtgagt
actgaaaacttagtcacatattgtaaatgcaaaactaacaggagaaaaaacatgtactgt
cagctgaaaatggaaacagtgacattgatccttaggaagtctggaccacgtggcttacca
ggtatcaagggagagccaggaaaggatggggccaagggtgaccgaggactacctggtttt
cctggattacatgggatgccagcaccaaagggagaaaggggtcctaaaggagatcaagga
gtaccaggaatatatggaaaaaagggttcaaaaggagagaaaggtgatacagnnnnnnnn
nnnnnnnnnnnnnnngaagacaatttgggagaccctggcagaagtgggaaagatggatta
ccaggaagtcctggtttcaagggagaagttggacagcctggacctccaggcctagaaggg
catcggggagagcctggaattcctggaatccctgggaatcaaggagcaaaaggacagaag
ggtgaaattggaccaccgggtcaaccaggagcaaaagggtcaacaggggatactggtttg
atgggaccagaaggctcatttggtctacctggagctcctgggcctaagggtgataaaggc
gaacctggaatacagggaaaaccaggatcatcaggagccaagggagatctaggagtaccg
ggtgccccaggtgaaccaggcctgcctgccgtgccaggcaccagccccatacagggggac
aaaggaaaccaaggtgaaagtggtatccagggactgaaaggagaaaaaggaagacaagga
aatccaggcttacagggagtagaaggaccaagtggagaacaaggagagaaaggtgagaaa
ggagatccaggcattcgaggcatcaatgggcaaaaaggagaatctggtatccagggtttg
gttggacctcctggtctcagaggtcagccaggagatagaggacccccaggaccacctgga
tcagatggaaaacctgcacgagaattttcggaagaatttattcgacaagtgtgctcagat
gtactgagaacccagttgcctgccatcctccagagtggaaggctacaaagctgtaaccac
tgtcaatcccaaagcgcttctccgggacttccaggaccaccaggtccaagaggccctgaa
ggccccagagggtttcctggactgccaggcaacgatggtgttccagggctgacaggcatc
cccggccgccctggggctcgtgggacaagaggactgccagggaaaaatggcgcaaaaggc
aaccaaggaattggggttcccgggatccaaggcccaccaggacctccaggtcctgagggt
cctccaggtatgagtacagaaggacgtcctggagagcgtgggccacctggtaaagatggt
gatcgtggcagtccgggaatgccaggaccggttggaccccctggaatttgtgacccatca
ctatgttttagtgtaattgtggggagagacccatttagaaagggaccaaattattga
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