KEGG   Columba livia (rock pigeon): 102094132
Entry
102094132         CDS       T02912                                 
Symbol
HLTF
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
clv  Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:clv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:clv04121]
    102094132 (HLTF)
   03400 DNA repair and recombination proteins [BR:clv03400]
    102094132 (HLTF)
Enzymes [BR:clv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102094132 (HLTF)
Ubiquitin system [BR:clv04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102094132 (HLTF)
DNA repair and recombination proteins [BR:clv03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    102094132 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 DEAD zf-RING_2 zf-ANAPC11 ResIII zf-rbx1 zf-C3HC4_4 zf-Nse HDA2-3 Prok-RING_4 Prok-RING_1
Other DBs
NCBI-GeneID: 102094132
NCBI-ProteinID: XP_021154230
LinkDB
Position
Unknown
AA seq 993 aa
MPIIQEPKTSFAKETEEILQGDSLSVTSAEERETTPVFLAGFCSGFGMADTPSVGDAPGA
EDDTDLGVLYGTLRGSVVGLRYYTGIVNNNEMVALQREPNNPYDKNAVKVNNVNGDQVGH
IKKELAAALAGIMDNKLALVEGVVPYGAKNVFTMPVQMSFWGKEENKEAVLDQLKRHGFK
LAPPLKVGSECGFGSKWISGKAGPSYRAPFHAPVQLTPEQLISEFDKLFEDLKEDDKTRE
MEGAEALGTLLLPHQKQALAWMVSRENRNNLPPFWEERGGFYYNTLTNFAEKMRPQDVPG
GILADDMGLGKTLTTIALILTNFQDGKPLPVGKITSERFRQESGTNSTSNVGRGLCEDSG
KVMGPGASGIKKFDTTPLKTSSCLPKRYFRGKAKKRRHSGSGSSGQPGERPLRQAGTASC
VEEDTGFASVLFPSSACLKRQTKRKVTATAENNCSVDVPRATLIVCPLSVLSNWIDQFNQ
HVHRDFHVNIYVYYGSDRNKDPSVLAEQDVVLTTYSILATDYGIRDGSPLHKVRWLRIVL
DEGHTIRNPGAQQTRAALSLEGRRRWVLTGTPIQNSVKDLWSLISFLKLKPFSDQEWWRR
TIQRPVVLGAPGGLGRLQCLIRSITLRRTKTSKVKGKPVLELPERKVLIQHVTLTEEERR
IYESVKKEGKAAVSRFLSEGTVLAHYADVLGVLLRLRQLCCHPRLCIDTASGLSADNKTP
EELRETLVSKMKLVLSSGSDEECAVCLESLTCPVITRCAHVFCKPCIFEVIRGEQPKAKC
PLCRNELRAEDLVQCPQEEETDPSDGKKSDQEWTPSSKINALMHALIELQRDDPTAKCLV
VSQFTAFLSLIENPLKESGIAFTRLDGSMAQKKRAEAVQCFQSSRAGSPTVMLLSLKAGG
VGLNLTAASRVFLMDPAWNPAAEEQCFDRCHRLGQNRGVVITKFIVKDSVEENMLRIQNK
KRELAAGAFATTKPSAKEVKQTKINEIKALIDV
NT seq 2982 nt   +upstreamnt  +downstreamnt
atgccgattatacaggaacctaagacatcgtttgcaaaagaaacggaagagattctgcaa
ggggattctctcagtgtaacatctgctgaggagagagaaactactcccgttttcctcgcc
ggattttgctccggttttgggatggcagacaccccctctgtgggcgacgctcccggagca
gaggacgatacggacctgggtgttttgtatggaacgttgcgaggaagtgtcgttggatta
cgatactacacagggattgttaataacaatgaaatggttgcacttcagcgagaacccaac
aatccttatgataaaaatgcagtgaaagtaaataacgtgaacggagaccaggtgggccat
ataaagaaagaactggcagcagctttggcaggcattatggacaacaagctagcattggtt
gaaggagttgtcccttatggagcaaaaaatgtgtttaccatgcctgttcaaatgagcttt
tggggaaaagaagaaaacaaggaagcagtactggatcagctgaaaaggcacgggtttaaa
ttggctcctcctctgaaagtaggttcagaatgtgggtttggatcgaagtggatttctggg
aaagctggtccaagttacagagctccgtttcacgctcccgtgcagttgacacctgaacag
cttataagtgaatttgacaaattgtttgaggatctgaaggaagatgataaaactcgtgag
atggaaggagcagaggccctcggcacgctcttgctgccccatcagaagcaggcgttagct
tggatggtctcacgtgagaacaggaacaatttgccaccgttttgggaagagagaggtggc
ttctattacaatacacttacaaattttgcagaaaagatgcgacctcaagatgttcctgga
gggatactggctgacgatatgggactgggtaaaaccctgactacgattgcactgattctc
acgaatttccaggatggcaaacctcttcctgttggaaagatcacaagtgagaggtttcgt
caggaatctggtactaacagcacgagcaacgttggacgcggactgtgtgaagactctggc
aaggtgatgggccctggtgcttctggcataaagaagttcgatactactccattgaaaacc
tcgagttgtcttccaaaaagatattttagaggtaaagccaagaagcgcagacactcgggc
agcggcagctcggggcagcctggggagcggccactgcggcaagctggaacagcttcgtgt
gtggaagaagatacaggctttgcatctgtccttttcccttcatctgcttgtctgaaacga
caaacaaagagaaaagttactgctacagctgagaataactgttcagtggatgtccccaga
gcaacactgatcgtgtgtccactgtctgtcctgagcaactggattgaccagttcaaccaa
catgtccaccgagattttcatgtaaatatttatgtttactacggttctgaccgtaacaaa
gacccatcagttcttgcagaacaagacgttgtactgacaacatacagcatcttagctact
gattatggtatcagagatggcagccctttacacaaagtgaggtggctgaggatcgtgctg
gatgaggggcacaccatccgaaatcccggtgctcagcaaacgagagctgcgctgagtctg
gagggacgcaggagatgggtgctcacaggcactcctattcagaattctgtgaaggatttg
tggtctctcatttccttcttaaaactgaagcctttctccgatcaggagtggtggcgcagg
acgatccagcgcccggtcgtgctgggagctccgggaggactcgggcgcttacagtgtctg
ataaggagtattacccttagaagaactaaaacaagtaaagttaaaggaaaacccgttttg
gagttaccagaacgtaaagttcttattcagcatgttacgcttactgaggaggagagacgg
atctacgagtccgtgaagaaggaaggcaaagctgctgtcagcaggtttctcagcgaaggg
accgttctggctcactacgccgacgtccttggcgtcctgctcagactgaggcagctttgt
tgtcaccctcgtctttgtatagacacagcttctggtctttcggcggataataaaactcct
gaagaactgcgtgagacattagtgagcaaaatgaagttggttctgagctccggttcagat
gaggaatgtgcagtttgcttggaatcgctgacgtgtcccgtgataacgcgctgcgcgcat
gtgttttgtaagccgtgtatttttgaagtcatcagaggcgaacagccaaaggccaaatgc
cctctctgtaggaatgagctccgagcagaggacttggtgcagtgtccccaggaagaggaa
acagaccccagcgatgggaagaagtctgatcaggagtggacgcccagttcaaagataaac
gcgctcatgcatgcgttgatagagctacagagggatgatccaactgctaagtgtctggtc
gtttctcagttcacagctttcctgtcgctgatagaaaatcccctgaaagaatcggggatt
gccttcactcgtttggatgggtcgatggcacagaagaaaagagcagaagcagtccagtgt
ttccagagcagccgagcgggatccccgactgtcatgcttttgtctctgaaagcaggtgga
gttggattaaatctgacggcggcctcccgagtgtttttaatggatcctgcctggaacccg
gctgcagaggagcagtgcttcgaccggtgccacaggctgggccagaaccggggtgtcgtt
attactaagttcattgtgaaggattcagtggaggaaaatatgctgagaattcagaacaag
aagagggaacttgcagcaggagcctttgctaccacgaagccttcagcaaaggaagtaaaa
caaaccaaaattaatgaaattaaggctctaattgatgtatag

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