Columba livia (rock pigeon): 102094258
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Entry
102094258 CDS
T02912
Symbol
USP25
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 25
KO
K11849
ubiquitin carboxyl-terminal hydrolase 25 [EC:
3.4.19.12
]
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clv01002
]
102094258 (USP25)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clv04121
]
102094258 (USP25)
Enzymes [BR:
clv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102094258 (USP25)
Peptidases and inhibitors [BR:
clv01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102094258 (USP25)
Ubiquitin system [BR:
clv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102094258 (USP25)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UIM
UBA_4
Motif
Other DBs
NCBI-GeneID:
102094258
NCBI-ProteinID:
XP_021155275
LinkDB
All DBs
Position
Unknown
AA seq
1272 aa
AA seq
DB search
MTLQRRHPCPPAKGERYFQRVTYGWLRRSRPSKKVLGLGTGHIEDDSHMSPTMEIEVDVV
LDGKRWSHGLSTCDLVHKRSILEVVLAAAVRGSGAVCWLAELLGAAPVARRCCRGCWGAL
GSGWAAGSGSGLSGSSSDGQACLGTCTPCDNKHQQTFLNQLREITGINDIQVLQQALKDS
NGNLELAVAFLTAKNAKVPQLEEATYYQTALPGNDRYISVGSQADSNVIDLTGDDKDDLQ
RAIALSLEESNRAFRETGITDEEQAISRVLEASIAENKASLKRTHPEVWSDSPNPYDRKR
QDNCPVGLKNVGNTCWFSAVIQSLFNLLEFRRLVLNFSPPANAQDLPRNQKEHRNLPFMR
ELRYLFALLVGSKRKYVDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDAFKSNDSQQQ
DVSEFTHKLLDWLEDAFQIKAEEERDGEKPKNPMVELFYGRFLAVGVLEGKKFENTEMFG
QYPLQVNGFKDLHECLEAAMIEGEIESLHSENSAKSGQEHWFTELPPVLTFELSRFEFNQ
ALGRPEKIHNKLEFPPILYLDRYMHKNREITRIKRDEIKRLKEYLTVLQQRLERYLSYGS
GPKRFPLVDVLQYALEFASSKPVCTSPVDDLGASAPASGTLPAQTSPSTIEQQGPSSSDV
PSTSPVQRSVIHKPFTQSRIPPDLPMHPAPRHITEEELSVLEGCLHRWRTEVENDTRDLQ
ESISRIHRTIELMYSDKTMVQVPYRLHAVLVHEGQANAGHYWAYIYDHHQKRWMKYNDIS
VTKSTWEELERDSFGGXXXXLMYINDKEQYLIQEEFNKETGQILVGMDTLPSDLRDYVKE
DNKRFEKELEEWDAELAQKAQQEKLLSQIPRAPAPSPAPVQAGEPEYLEQPSRTDLSKHL
KEDSVQAINKALAEQEDRGPEAIMDSSSDNGPAQPAPNQRVVEVAIPDVGTFVIESEEGG
YDDEVMLTPNMQGIIMAIGKARNVYDRCGPEAGFFKAIKLEYTRLLKLAQEDPPPECDYR
LRHAIVYFIQNQAPKKIIERTLLEQFGDHNLSFDERCRNIMKVAQSKLEMIKPDEVNMEE
YERWHQDYRNFRETTMFLMVGLEFFQKKSYMEALLYLIYAYQNNKELLSKGPYRGHDEEL
ISHYRRECLLKLNEHAAALFESGDDQEVNNGLIIMNELIVPCLPLLLVDEMEEKDIVAVE
DMRNRWCSYLGQEMEPNLQEKLTDFLPKLLDCSTEIKGFNDPPKLPSYSTHELCERYARI
MLSLSRTPADGR
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgcagcgccggcatccctgcccgcctgctaaaggtgaacgctatttccagcgt
gtgacatacggctggctgcgacgctctcgcccgagtaaaaaagtgctgggtttggggact
ggtcatatagaagatgatagtcatatgtccccaacaatggaaatagaggttgatgtagtg
ctggatggcaagagatggtcacatggattatccacttgtgacttggtacacaagcgcagt
attttggaagttgtgctggcagcagcagtcagggggtcaggagctgtgtgctggctggct
gagctgctgggggcagcccctgtggccagaaggtgctgccgagggtgttggggagccctg
gggtcaggctgggctgctggcagtggctctgggctgtcgggctcttcctctgatgggcag
gcatgcctgggtacatgcacaccctgtgataacaagcaccagcaaacatttttaaatcag
ctgagggagatcactggtatcaatgacatccaggtactgcaacaggcactgaaggacagc
aatggtaatctggagttggctgtggctttcctcaccgcaaagaatgccaaggttccccag
ctagaggaggcgacttactatcaaacagcccttcctggaaatgacagatacatcagtgtg
ggcagccaggcagacagcaatgtgattgatctcactggagatgataaagatgatcttcag
agggcaattgccttgagtttggaggaatcaaacagggcattcagggagactggaataaca
gatgaggaacaagccattagcagagtcctagaagccagtattgcagaaaataaagcaagt
ttaaagaggacacatccagaggtgtggagtgactctcccaacccatacgatcgaaagcgg
caagacaactgtccagtggggttaaagaatgttggcaacacgtgctggtttagtgctgtc
atccagtcattatttaacctactggagtttcgaagactagttttgaatttcagtcctcct
gcaaatgctcaagacttgccccgaaaccaaaaggaacataggaatctgcctttcatgcgt
gaattgaggtacctatttgcacttctagttggttccaagagaaaatatgttgacccannn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnntaaagatgcttttaaatcaaatgattcccaacagcaa
gatgttagtgaatttacacacaaattattagattggctagaggatgccttccaaattaaa
gctgaagaggagagggatggagagaaaccaaagaacccaatggtggagctgttttatgga
cgatttctagcagtaggtgtgcttgaaggtaaaaaatttgaaaacacagaaatgttcggc
cagtatccactccaggttaatggctttaaggatctgcatgagtgcctagaagctgcaatg
attgaaggggaaattgaatctctccattcagaaaactctgcgaagtctggtcaggagcac
tggttcactgagcttcctcctgtcttaacttttgagctatcaagatttgagtttaatcag
gctttggggagaccagagaagatacacaacaaattagaatttcctccaattttgtatctg
gacaggtatatgcacaaaaacagagaaataacgagaattaaacgggatgaaatcaagaga
ctcaaagaatacctcacagttttacagcagagattagaacgatatttaagctatggttct
ggtcctaaacgattccccttggtagatgtcctgcagtacgccttggagttcgcctctagc
aagccagtgtgcacgtctcccgtcgatgacctgggtgctagtgcccctgccagcggcacg
ctgccggcccagacctcccccagcacaatagagcagcaggggccctcatcttcagatgtt
ccaagcacatctcctgtacaaagatcagtaatacataaaccgttcacacaatcacgaatc
cctcctgacctgccaatgcatccggcaccaaggcacatcactgaggaagagctgtctgtc
ctagaaggctgtttacatcgctggaggactgaagtagagaatgacactagagatttacaa
gaaagtatatctagaatacatcggacgattgaattgatgtactctgacaaaacaatggtt
caagttccttataggttgcatgctgtgctagttcatgaaggtcaagctaatgcaggacac
tattgggcatatatttatgaccaccaccaaaagagatggatgaaatacaatgatatttct
gtgacaaagtcaacttgggaagagttggaacgggattcttttggtggtntnnnnnnnnnn
ttaatgtatatcaacgataaggaacaatacttgatacaagaggagtttaacaaagaaacg
ggacagatccttgttggaatggacacgctaccttctgatctaagggattacgtcaaggaa
gacaataaacgttttgaaaaagagcttgaagaatgggatgcagaactcgctcagaaagca
cagcaggagaagttgttatctcagatacctagggcaccagcaccctcacctgctccagtt
caagcaggagaaccagaatatttagaacagccatcaagaactgatctttcaaagcactta
aaagaagattccgtacaagcaatcaataaagctttagctgaacaagaagatagaggtccg
gaagctataatggattcgagctctgataatggcccagctcaaccagctcctaaccagcga
gttgtagaggtggcgattcctgatgtagggacttttgtgattgagtcagaggaggggggt
tatgacgatgaggtcatgctgaccccgaacatgcaaggtattatcatggctataggtaaa
gccaggaatgtttatgacaggtgtgggccagaagcagggttctttaaggcaattaaattg
gaatacacacgacttctaaaattagcccaggaagatccaccgcctgaatgtgattaccgt
ttgcgtcatgcaattgtttacttcatccaaaaccaggcaccaaagaagataattgagaga
acattactggaacagttcggagatcacaatcttagctttgatgaaaggtgccgtaacata
atgaaggttgctcaatctaaacttgaaatgataaagccagatgaagtaaacatggaagaa
tatgagagatggcatcaagactatagaaatttcagggaaacaaccatgtttctcatggta
ggactggagtttttccaaaaaaagagctatatggaagccttgctctaccttatctatgct
taccagaataacaaagaactcttgtccaaaggcccgtacagagggcacgatgaagagctg
atatctcactacagacgagaatgtttgctaaaactaaatgaacatgctgcagcactcttt
gaatcaggagatgatcaggaagtaaacaatggcctgatcattatgaatgagcttattgtc
ccgtgtttgccattactactggtggatgaaatggaagaaaaagatattgttgctgtggaa
gatatgagaaaccgttggtgttcctatcttggacaagaaatggaacctaacttgcaagaa
aagctgacagatttcctgccaaaactgctagattgttctacagagattaaaggtttcaat
gacccgccaaagttaccctcctactccacacacgaactgtgtgaaagatacgcccgaatt
atgttgtcactcagtcgaactccagccgatggaagataa
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