Columba livia (rock pigeon): 102096713
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Entry
102096713 CDS
T02912
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 3-like
KO
K11642
chromodomain-helicase-DNA-binding protein 3 [EC:5.6.2.-]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102096713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clv03036
]
102096713
Chromosome and associated proteins [BR:
clv03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
102096713
Chromatin remodeling factors
NuRD complex
102096713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDII_SANT-like
Helicase_C
DUF1087
Chromo
PHD
ResIII
HDA2-3
DEAD
AAA_22
PHD_2
Motif
Other DBs
NCBI-GeneID:
102096713
NCBI-ProteinID:
XP_021138563
LinkDB
All DBs
Position
Unknown
AA seq
1145 aa
AA seq
DB search
ILPWGPLNFGVSPQEKEGVQWEAKDEEEEEEEEEEEGEKEEEDDHMEYCRVCKDGGELLC
CDACVSSYHIHCLNPPLPEVPNGEWLCPRCTCPVLKGGDPQFGGMEERFYRYGIKPEWMT
VHRIINHSVDRKGQYHYLVKWRDLPYDQATWEDDEMPIPDYDLHKMAYWRHRXXFLGEPP
PQPRRYKKKKKETPGEGPPDSPTNDPTVKYETQPRFITATGGTLHLYQLEGLNWLRFSWA
QSTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPAFY
VVTYTGDKDSRAIIRENEFSFDDNAMKGGKKAFKMKREAQVKFHVLLTSYELVTIDQAAL
GSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIEHKLLLTGTPLQNNLEELFHLLNFXRPC
PPSNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQ
KKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYXXXVCPQESPKLPSGAYEG
GALIKASGKLLLLQKMLRKLKEQNHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITG
ALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVVIFDSDWNPHNDIQVGTRTPV
SPQRHPVSPQCHPRVTPQWWRYEGGDDEDGDDGDDEDGDDDGDDEDDEDGDDEDGDDGDD
EDDGDGEDGDDEDGDDGDDEGDGLMNLMEMATMALLALEPPLGVPLSPYPPVPMSPCPTV
SVCLQIEEIEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAA
QEDQDNQSEYSVGSEEEDEDFDERPEGQCQRETLSPCHPCHCVTRVTVSPVSPCPPVPMF
PCPSDPKSPQVLGFNTRQRKAFLNAVMRWGMPPQDAFTSQWLVRDLRGKSEKEFKAYVSL
FMRHLCEPGADGSETFADGVXGLSRQQVLTRIGVMSLVKKKHGAMFDVSPVPATPAPSDR
GDPPGPPPDRDDGDSRDDKEPKGTEKMETEVGDEVNPQCPQVSPIVSPTTSPTLSPSPSS
LSLSPVMFLSPNLSRPCPHPVPIVPTSSPLPHCPPCLSVSPQGGPRRPGGTQASRVGTQA
SRGGP
NT seq
3437 nt
NT seq
+upstream
nt +downstream
nt
atcctcccatggggtcccctgaattttggggtgtccccccaggagaaggagggagtgcag
tgggaggcaaaggatgaagaggaggaggaggaggaagaggaggaggaaggcgagaaggag
gaggaggacgaccacatggagtattgccgcgtgtgcaaggacggcggggagctgctgtgc
tgcgacgcctgcgtgtcctcctaccacatccactgcctcaacccccccctgcccgaggtc
cccaacggggagtggctgtgtccccgctgcacgtgcccggtgctgaagggaggggacccc
caatttggggggatggaggagcgattctaccgctacggcatcaaacccgagtggatgacg
gtgcatcgcatcatcaaccacagcgtggaccgcaagggccagtaccactacctggtgaag
tggcgcgacctgccctacgaccaggccacctgggaggacgacgagatgcccatcccggac
tacgacctgcacaagatggcctactggagacaccgnnnnnntttcctgggggagcccccg
ccccagccccgacgctacaagaagaagaagaaggagacacctggggaggggccacccgac
tcccccaccaacgaccccacggtgaagtacgagacgcagccgcggttcatcacggccacg
ggggggacgctgcacctgtaccagctggaggggctgaactggctgcgcttctcctgggcc
cagagcaccgacaccatcctggccgacgagatggggctgggcaagaccatccagaccatc
gtcttcctctactcgctctacaaggagggccacaccaagggcccgttcctcgtcagcgcc
cccctctccaccatcatcaactgggagcgcgagttccagatgtgggcgcccgccttctac
gtcgtcacctacacgggtgacaaggacagcagggccatcatccgtgagaacgagttctcc
ttcgacgacaacgccatgaagggcggcaagaaagccttcaagatgaagcgggaggcgcag
gtgaagttccacgtgctgctcacgtcctacgagctggtgaccatcgaccaggcggcgctg
ggctccatccgctgggcctgtctggtggtggacgaggcgcatcggctcaagaacaaccag
agcaagtttttccgggtgctgaacgggtacaagatcgagcacaagctgctgctgacgggg
acgccgctgcagaacaacctggaggagcttttccacctgctcaacttcncccgtccgtgt
ccccccagcaatctggaggggttcctggaggagtttgccgacatctccaaggaggatcag
atcaagaagctccacgacctgctgggtccccacatgctgcggcgcctcaaggccgacgtg
ttcaagaacatgccggccaagaccgagctcatcgtgcgcgtggagctcagccccatgcag
aagaaatactacaagtacatcctgacgcgcaacttcgaggcgctgaactcgcggggtggt
gggaaccaggtgtcgctgctcaacatcatgatggacctgaagaaatgctgcaaccacccc
tacnnnnnnnacgtgtgtccccaggagtccccgaagctgccgagcggggcgtacgagggg
ggggcgctgatcaaggcctcggggaaactgctgctgctgcagaagatgctgcggaagctc
aaggagcaaaatcaccgggtgctcatcttctcacagatgacgaagatgctggacctgctg
gaggatttcctggactacgagggttacaagtacgagcggatcgacggcggcatcacgggc
gccctgcgccaggaggccatcgaccgcttcaacgcgccgggggcgcagcagttctgtttc
ctgctgtccacgcgggccgggggccttgggatcaacctggcaacggccgacaccgtcgtc
atcttcgactcggactggaacccgcacaacgacatccaggtggggacccgcaccccagtg
tcaccccaacgtcacccagtgtcaccccagtgtcacccccgtgtcaccccacagtggtgg
agatatgagggtggagatgatgaggatggggatgatggagatgatgaagatggggatgat
gatggagatgatgaagatgatgaagatggggatgatgaggatggggatgatggagacgat
gaggatgatggagatggtgaggatggagatgatgaagatggggatgatggagatgatgaa
ggcgatggcctgatgaacctgatggagatggcaaccatggctctgctggcactggagcca
cctcttggtgtccccctgtccccatatccccctgtccccatgtccccctgtcccaccgtg
tccgtgtgtctgcagatcgaggagatcgagcgcgagatcatcaagcaggaggagaacgtg
gaccccgactactgggagaagctgctgcggcaccactacgagcagcagcaggaggacctg
gcccgcaacctgggcaagggcaagagggtccgcaagcaggtcaactacaacgacgccgcc
caggaggaccaagacaaccagtccgagtactcggtgggatccgaggaggaggacgaggat
tttgacgagcggcccgagggtcagtgccagcgggaaaccctgtccccgtgtcacccgtgt
cactgtgtcacccgtgtcactgtgtcacccgtgtccccatgtccccctgtccccatgttc
ccatgtcccagtgaccccaagtccccgcaggtgttggggttcaacacccggcagcgcaag
gcgttcctcaacgccgtgatgcgctgggggatgccgccccaagacgccttcacgtcccag
tggttggtgcgggatctgcgggggaagagcgagaaggagttcaaggcctacgtgtccctg
ttcatgcgtcacctgtgtgaaccgggggctgatggctccgagaccttcgcagacggggtc
naggggctgtcgcgccagcaggtcctgacccgcatcggggtcatgtccctcgtcaagaaa
aagcatggggccatgtttgatgtgtcccctgtcccagccactccagcccccagcgaccgg
ggggaccctccggggccgccccccgacagggacgacggtgacagcagggacgacaaggag
cccaaagggaccgagaagatggagactgaggtgggtgacgaggtgaacccacagtgtccc
caagtgtccccgatagtgtccccaacaacgtccccaacactgtccccatctccatcatct
ctgtccctgtccccagtcatgtttttgtccccaaatctgtctcgtccctgtccccatccc
gtccccattgtccccacctcctcccctctccctcattgtcccccgtgtttgtcagtgtca
ccccaggggggacccaggcgtccgggagggacccaggcgtccagggttggaacccaggcg
tccagggggggacccag
DBGET
integrated database retrieval system
