Columba livia (rock pigeon): 102096792
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Entry
102096792 CDS
T02912
Symbol
RAI1
Name
(RefSeq) LOW QUALITY PROTEIN: retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clv03000
]
102096792 (RAI1)
Transcription factors [BR:
clv03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
102096792 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
102096792
NCBI-ProteinID:
XP_021146017
LinkDB
All DBs
Position
Unknown
AA seq
1762 aa
AA seq
DB search
MQSFRERCGFHGNQQSYQPTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYAG
YENSTVEKYHRGNKQLAGQQLQGRPAFSSYAVQENSPYPARYSGDESLQAWGSQPQALXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPMPFSQSPHFGQRS
QSFPASSTYSSVPGGSQPPQPPQTLQGRHHAPETLHYQNLAKYQHYNQPGQTYCQGDAPP
VRTPEHQSGNCKNLQKEKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKSAVPQKK
GIKTPARTPEQLKGQHCSPESSTYSAEQVGTPLSDPLSTPQSVHTETQDADYLSGSEDQL
ERSFLYCNQNRSPARVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSIHASLPLETFTK
YVTNERDCPRLLLSALSQEELASEIIVLQDAISEKADKTWANSPMLSKEATKSPFQLENH
RPCLDSMVKGTWPSQGDSSTLTEPLKLDKASGASAGKDFGEEVYEGPQVEFVDAETKDAL
KDASPLAFNSKPSIPAATSSAGAAGYSCYSNTTANSEGSGNAMEHFEWPEESLGEACLRW
KELGSGLQTSDLPKGLFPSKLVGSCKEKKNACGLDLCDGEQPAKSEPDQDFGQQAMEEEE
EETLTYDEATKADSERWLQDTRHCCSTGDFSEIPIISSPELKESDLEVEEYSSLCELAGS
EQKSVTYDTSPLKPPEMPAVLSSSEVPVSAEETVSTVEKESSAPAARLSGQSVILLGPAV
GTETKVKSWFKSSLPHIQPEEENGGGETSPPEVADAESAPSVAVKQQLVPDXKTEPVLRG
KSLRNKRVHCRLLEGDSPGSAVPSPFLDFLAAGGMAGACLGPDGPAEVPSKNAHSQTPRF
PAEGLPARMCTRSFTALAEPRAPAALEGLKAPAHQEKLGKKPGCGVKQRVAFKARKRSGR
PTPKVVQNASDATTILVPGLVTAEEAVGPTPPEGDVVEGGERDQRSMILRSRTKTQEVFY
TKRRRGKRAADVRLKNCKAPKKLINNHLPPAFKLSAPGSPHKEGKVGARMKLPKAGPGMG
GKMSERPLHSLKRKSTFISPIPTKKRNLVLRSNSGGVKEEKPEGPSSLFKKMPVAKKVKA
KLAPKSSSEAVPKPLPPKEAPDVCIKITSRAAFQEATKTKVLPPRKGRGLKLEAIVQKIT
SPNLKKFTCKPAATVAATVATYSTSLSPVGTERERAVKHSGVALAAGXXXXXXXXXXXXP
TAPPAEQLCRNPTGRAPKGKLGSGKKFSAEGCQGEADALALGAQPSSVAAKSLGLLPKKR
NRKGKAAALGMAKAPLGPALPVLPRERAAGPGGGEETLREGKKPKSEEKEAGGGEGPPEV
RPAAGAARGPYVHVERRGEFTTACTVINTPGEEARLQRGPAGPAPRPRAALPASSTMHMG
PVVSKALSAACLVCCLCRNPANYKDLGDLCGPYYPEDCLPKKKSRLKEKARVEGPGEDAI
PPAATADRAPRGTEGGCGAGSKAARPEGAAEVAKQSSLRSSPRGMFRRLQSCYCCDERTE
GEEAAEKPRRHECHKAESPPQEPAGDTQEHWLHEACAVWTAGVFLVAGKLYGLQEAVKAA
ADLKCSSCQQAGATVGCCQKGCPHTYHYACAVDTGCSLTEESFSLKCPKHKVSTEPPCTH
LQCFAAPGVGGSAFEQSTPQGHPTPWHTYPRHSAPWGIMSLDDTRPPRTLQCRDRPVGAR
SGTPSRGTGDYPPSLSTDGVWG
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagagctaccagccgact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcggcagaggctggtggcgaaggagtactacagtcagcagcaactgccgtacgcgggc
tacgagaacagcaccgtggagaaataccaccggggaaacaagcaattagccggacagcag
ctgcaaggcaggccggccttttccagttacgccgtgcaggagaacagcccttacccggcc
cgttattcgggagatgagagcctgcaggcatggggcagccaaccacaggcgctnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnctcctcgcctatgcccttctcacagagcccccactttgggcagcgctcc
cagtccttccctgcctcctccacctactcctcggtgccggggggcagccagcctccacag
ccaccgcaaactttgcaagggcgtcatcacgccccagagactctccactaccaaaacctg
gccaagtaccaacattacaaccagccaggtcagacctactgccagggtgatgcgccgccc
gtgcggacaccggagcatcaatctgggaactgcaaaaatttgcaaaaggagaagctgccc
gaaaacttgctgtcggatctgagcctgcagagcctgacggcactcacctcccaggtggag
aacatctccaacactgtccagcagctgctgctctccaaatcagctgtgccccagaaaaag
ggcatcaagaccccggcgaggaccccagagcagctcaaggggcagcactgcagccctgag
agcagcacctactcggcagagcaggtggggacccctttgtctgacccactgagcacccct
cagtccgtccacaccgagacacaggatgccgactatctcagtgggtcagaggaccagctg
gagaggagtttcctgtactgcaaccagaaccgcagccctgcccgtgtcaacagcaactct
aaggcgaagcccgagtctgtgtccacctgctctgtcacctccccggatgacatgtccacc
aaatcagatgactccttccagagcatccatgccagcctgccactggagaccttcaccaag
tatgtgaccaatgaacgggactgtccccggctgctcctcagcgccctatcccaggaggag
ctggcttccgagatcatcgtcctgcaggatgccatcagcgagaaggcagacaaaacctgg
gccaactcacccatgctgagcaaggaggccaccaagtcccccttccagctggagaaccac
cggccctgcctggactccatggtgaagggcacctggcccagccagggtgactccagcacc
ctcaccgagcccctcaagctggacaaggcttcaggggccagcgctgggaaggactttggt
gaggaggtgtatgagggtccccaggtggagtttgtggatgctgagactaaggatgcgctg
aaggacgcgtccccgctggccttcaactccaagcccagcatcccggcagcgacatcgagc
gcgggagctgccggctacagctgctactcgaacaccaccgccaactcggagggctcaggg
aatgccatggagcacttcgagtggccagaggagagcctgggcgaggcgtgcctgaggtgg
aaggagttgggctcgggtctgcaaacctccgacctgcccaagggcttgttccccagtaaa
ctggtgggctcctgcaaggagaaaaaaaatgcctgtggcttggatctgtgtgatggcgag
cagccagccaagagcgagccggaccaggactttggccagcaggcaatggaggaagaagag
gaggaaacactgacttacgatgaggccacgaaggcagacagtgagaggtggctgcaggat
acccggcactgctgctcgacaggggacttcagcgagatccccatcatctcctcgcccgag
ctgaaggagtcagacctggaggtggaggagtattcctcgctctgcgagctggccggctcg
gagcagaagtcggtgacatatgacacctcgccactcaagcccccagagatgcccgccgtg
ctgtcctccagcgaggtgcccgtgtccgccgaggagactgtcagcacagtggaaaaggag
agctcggctcctgccgcacgcctctccggccagtccgtcatcctgctgggccctgccgtg
ggcacagagaccaaggtgaagagctggtttaagtcctccctgcctcacatccagcccgag
gaggagaacggtggaggggagacatccccccccgaggtggccgatgccgaatctgcccca
tcagtggcggtgaagcagcagctcgtgcccgatnngaagacggagccggtcttgcggggc
aagagcctccgcaacaagagggttcactgccggctgctggagggggacagccccggcagc
gctgtgcccagccccttccttgactttctggcagccggtggcatggccggcgcctgcctg
gggccagacggcccggcagaggtgccaagcaagaacgcccacagccaaacgccccggttt
ccagccgagggtctgccagcgcgcatgtgcacccgctccttcaccgccctggccgagccc
cgcgccccggcagcgctggaggggctgaaggcccccgcgcaccaggagaagctggggaag
aagcctggctgcggtgtgaagcaacgggtggccttcaaagccaggaagcgcagcggccgg
ccgacccccaaggtggtccaaaacgccagtgatgccaccaccatcctggtgcctggcttg
gtgacggcggaggaggcagtagggccgacaccaccggagggggacgtggtggagggaggg
gagagggaccagcggtcgatgatcctgcgttcccggacaaagacgcaggaggttttctac
accaagaggcggcggggcaagagggcagctgatgtccgtctgaagaattgcaaggcaccc
aagaagctcattaacaaccacctcccacctgccttcaagctgtcagccccaggcagcccc
cacaaggagggcaaggtgggtgctcggatgaagctgcccaaagcagggccaggcatgggg
ggcaagatgtccgagcggcccctgcactcgctgaagagaaagtccaccttcatctccccg
atccccaccaagaaaaggaacctggtcctgcggagcaacagtggtggcgtgaaggaggag
aagccagagggcccctccagcctcttcaagaagatgcctgtggccaagaaggtgaaagcc
aagctggcccccaagagctccagtgaagccgtcccaaagcccctcccaccgaaggaggcc
cccgacgtctgcatcaagatcacctcccgggcagccttccaggaggccaccaagaccaaa
gtgctgcccccccgcaagggccgtggcctcaagctggaggccatcgtccagaagatcacc
tcgcccaacctgaagaagttcacctgcaaaccggcagccacggtggcagccacagtggcc
acctacagcacctccctgagcccagtagggacagagagggagcgggcggtgaagcacagt
ggggtggccctggcagcgggcgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaccc
accgcaccgccggctgagcagctctgccgaaaccccaccggccgagcgccaaagggcaag
ctgggcagcgggaagaagttctcagccgagggctgccagggtgaggccgatgccctggcc
ctgggggcacagcccagctctgtggcagccaagagcctggggctactgcccaagaagagg
aaccgcaagggcaaagcagcagcgctgggcatggccaaggctccgctgggccctgcgctg
ccggtgctgccccgggagcgtgcagccggcccaggcggcggggaggagacgctgcgggag
gggaagaaaccaaagagtgaggagaaggaggccgggggcggtgaggggccccctgaggtg
cgtcccgctgctggggcggcgcggggcccctacgtccacgtggaacggcgtggcgagttc
accaccgcctgcaccgtcatcaacactcccggtgaggaagcccggctgcaacggggaccg
gctgggccggcaccgcgaccacgggcagctctgcccgcctcctccaccatgcacatgggg
ccggtggtgtcgaaggcgctgagcgctgcctgcctggtctgctgcttgtgccgcaaccct
gccaactacaaggacctgggggacctctgcgggccctactaccccgaggactgcctgccc
aagaagaagtcgcggctgaaggagaaggcacgggtggaggggccgggcgaggatgccatc
ccgcccgccgccacggctgaccgggcgccccgagggacagagggtggctgtggtgccggc
agcaaggcggcgcggccggagggtgccgcggaggtggccaagcagagctcgctgcgctcc
agcccgcggggcatgttccgtaggctgcagagctgctactgctgtgacgagaggacagag
ggcgaggaggcggccgaaaagccccggcggcacgaatgtcacaaggccgagtccccgccg
caggagccggcgggtgacacgcaggagcactggctgcacgaggcctgtgccgtatggacc
gctggggttttcctggtggcggggaagctctacgggctgcaggaggccgtcaaggcagct
gctgacctgaagtgctcgagctgccagcaagcgggagccaccgtgggctgctgccagaag
gggtgtccccacacctaccactacgcgtgtgccgtcgacacaggttgctcattaaccgaa
gagagtttctctctgaaatgtcccaaacataaggtaagcacagaacccccctgcacacac
ctccaatgctttgcagcccctggggtagggggctctgcgtttgaacaatctaccccccag
ggacaccccactccatggcacacctaccccagacactcagccccatggggtatcatgtcc
ctggatgacaccaggccccccaggaccctgcaatgcagggacaggccagtgggtgccagg
tctggaacccccagccggggtactggggattatcccccttccctaagcactgatggggta
tgggggtga
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integrated database retrieval system
