Columba livia (rock pigeon): 102098741
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Entry
102098741 CDS
T02912
Symbol
HELZ
Name
(RefSeq) LOW QUALITY PROTEIN: probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clv03019
]
102098741 (HELZ)
Messenger RNA biogenesis [BR:
clv03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
102098741 (HELZ)
3'-5' decay
Other 3'-5' decay factors
102098741 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_19
AAA_30
UvrD-helicase
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
AAA_22
zf-CCCH_4
AAA_7
AAA_16
Bac_DnaA
AAA_5
Motif
Other DBs
NCBI-GeneID:
102098741
NCBI-ProteinID:
XP_021136395
LinkDB
All DBs
Position
Unknown
AA seq
1941 aa
AA seq
DB search
MADRRPEKACEQACESLKRQDYEVAVKHCTDALLALSHCPPAHLPEPCQAQVDRIKIETL
LYRIASFLQLKKYGQADEDCRHVLGEGLAQGDGSFRAVLCCLHLNGKLQIVSNVLSKSLM
GESLNGMVTKDLTRLKTLLAETEAAGKVPSGYHVEDLEEGSRDGWQFRPPPRGVTSSEEY
TLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYASRLIRLKQQKENKQCSGSYMETLIE
KWMNSLSPEKVLSECVEGVRVEHNPELSVTVTTKKSHQTWTFALTCKPARMLYRVALLYD
AHRPHFSIVAISAGDSTTQVSQEVPENCQEWIGGKMVQNGLDHYVYKVSIAFNTEIFGTF
RQTVVFDFGLEPVLMQRVMIDAASTEDLEYLMHARQQLLTTAKRWDSTSKTIVEFEPNET
TELEKSLLTRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNIK
VQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVTK
EKSAQTQGTKEKVYEAAIEEKTKDYIFLRVSRECCEELNLRADCEMQVELQFQLNRLPLC
EMHYALDRIKDNGILFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQL
PPVLIIGPYGTGKTFTLAQAVKHILQQQDTSRILICTHSNSAADLYIKDYLHPYVEAGNP
QARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYLCQ
LDLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERNL
HVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPL
TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV
FRIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDST
EDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENESLHGI
TFEQIKAQLEALELKKTYVLNPLAPEFIPRALRHQHSANATKQQQSPPKGKVHHHNQNDH
FPPDGIVQPNPSVLIGNPIRAYTPPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNMVMSVPLPVPWTGYQGRFAVDPRLITHQAAMAYNMNLLQAHGRGSPIPYGLGHHSPV
SIGQQQQLQHPDKEQHEQSRNGKSENTAGPEISKIRTPEKKPVESKQVDLEANSQNRSPE
SRSSVGYPNAKFHRKDNLNPRQLNLHLTPPHSQYTVPNRHFQHLSQIPRQPYPLQQQQNL
LSQQQNHLPEQQNQMPAQQSQVVQQHNHLNQQPPQPSQLSPAYQAGPSQSFFNNSIPHRP
HSPAVDAVISEQHPPPMLQEINNPLRPIAQHNPVLPTHLNNFIEENPFGHXINFCFKTIF
VDRMHGNVALETIRQQQQARLQQWNEHNAYLSQGTIPYQHHHHPHLHLPQQPVGLHQQQQ
VRANWKLASNTEDETEATYSRFQDLLRELSHRDQSESRDLAEMPPPQSRLLQYRQVQPRS
PPALPSPSCNSNHSGHFPTFTENNRDVELTNNPAFQQHLPQIYNPPFSMPSEHITPSPLK
YLQPDGSWTYANLPQNHLMGQGFHYGIPPLPHRSQQNPFIQIPNHQHAVGQEPFHPLTSR
AVSASSLHSLEEYEPRGPGRPLYQRRISSSSVQACSEELSTPQDSLGQCKELQDHSNQSS
FNYSPPELWVNSSSSAPYPNIPCNGASRAVPARELLAPPKTVKPPEEHLKAENIPLSNSF
NYNVLQHLGQFPPLMPNKQLAESSGTGPPSASMSYASALRAPPKPKPPPEQAKKNSDPLS
LFQELSLGSSSGSNGFYSYFK
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagaccagagaaggcatgtgaacaagcatgtgaatcccttaagcggcag
gattatgaagtggcggtgaagcattgcacagacgctctgctcgccctcagccactgcccc
cccgctcacctcccggagccttgccaggcgcaggtcgaccgcatcaaaatcgagactctt
ctgtatagaattgcttcctttttacaacttaaaaagtatgggcaagcagatgaagactgt
aggcatgtgctgggagaggggctggcccagggcgatggatctttccgtgccgtgctctgc
tgcttgcatcttaacgggaagctgcaaattgtgtctaatgttctttccaaatcactgatg
ggtgaatcactgaacgggatggtaactaaagatctgacacgactgaaaacacttcttgct
gaaacagaggcagctggtaaagtaccatcgggatatcatgtagaagatttagaagaaggg
tcccgggacggttggcagttccgccccccgccccggggagtcacgagcagtgaagaatac
acgctatgtaaaagatttttagagcaagggatctgcaggtacggcgcgcagtgtacttca
gcgcattcccaggaggagctgacggaatggcagaagcgctacgcctcccgcctgatccga
ctgaaacagcagaaggaaaacaaacagtgttcgggcagttatatggaaaccttgattgag
aaatggatgaactcgttatctcctgagaaagtgcttagtgaatgtgtagaaggagtgaga
gtagaacataatcctgagctgtcggtaactgtcaccaccaaaaagtctcatcagacatgg
acgtttgctctcacttgcaagcctgcaagaatgctgtatcgagtggcattgctttatgat
gcccatcgtccacattttagtatcgttgcaatatctgctggagacagcactacccaggta
tcacaagaagttccagaaaactgtcaggagtggataggaggaaagatggtccagaacgga
ctagatcactatgtatacaaagtcagtatagcctttaacacagaaatctttggaactttt
cgccaaactgttgtgtttgattttggattagaaccagtcctcatgcaacgagtaatgatt
gatgctgcttcaactgaagatcttgaatacctgatgcacgcacggcaacagctcctaacc
acagctaaacgttgggattccacttctaagactattgtcgaatttgagcctaatgaaact
actgaattggagaagagccttcttaccagataccaaatccctctctctgctgaccagcta
ttcacacaatctgtcctggacaaatcattgaccaagaccaactatcagtcacggctacac
gacctcctttatatagaggaaatagcacagtataaggaagtcagcaagttcaacattaaa
gtgcaattgcagattgtagcaagcttcatgctcaccggtgtttctggaggtgcaaaatac
gcccaaaacggacaactttttggccgctttaagctcaccgaaacgctttcggaagacact
ttggctggacggctggtgatgaccaaagtcaatgctgtttatttattgcctgtcactaaa
gagaagtcagcacagacccaaggaaccaaagagaaggtttatgaagcagctatcgaggag
aaaacgaaggattatatcttcttgagggtatccagggaatgctgcgaggaactgaacctt
cgggcagactgtgaaatgcaggttgagctccagttccagttgaatcgcttgcccctctgt
gaaatgcattatgccttggacaggatcaaggacaacggtattttgtttcccgatgtcagc
atgactcccaccatcccctggagtcccaacagacaatgggatgagcagttggaccctcgg
ctgaacgcgaagcagaaagaggctgttctggccatcaccaccccgctctccatacaactg
ccccccgttcttatcatcggtccctatgggacaggaaaaaccttcactctggctcaggca
gtcaagcacatactccaacagcaggataccagcaggattctcatttgcacccattctaat
agtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaatccc
caggcaagacctctcagggtatatttcagaaaccgctgggtaaagactgtccacccagtt
gtgcatcagtactgtttgatttcaagcacacattccacctttcagatgccccagaaagaa
gacattcttaagcagcgagtagtagttgttactttaaatacatcacagtatctgtgtcaa
ctggatcttgaaccaggtttttttacacacattctgttagatgaggctgcacaagctatg
gagtgtgaaactattatgcctctagcattagctaataaaaacacaagaattgtcttggct
ggagaccatatgcagctcagtccttttgtctacagtgaatttgccagggaaagaaacctt
cacgtttccttgctcgaccggctctacgagcactaccctgccgaatttccgtgcaggatc
ttgctgtgtgagaactatcgctcccatgaagctatcatcaattatacatccgaacttttc
tacgaaggcaaattgatggcaagtggaaagcagccagcacacaaagatttctaccctttg
acgttcttcacagcacgtggagaagatgtgcaagaaaaaaacagtacggctttttacaat
aatgcagaggtgtttgaagtagtcgagcgtgtggaagaattaagaaggaaatggcccgtt
gcttggggcaagttggacgacggcagcatcggggtcgtgacgccttacgctgatcaagtg
ttcagaattcgggctgagcttcggaaaaaaagactctctgatgtcagtgtggagcgagtg
ctaaacgttcagggaaaacagtttagagtgttgtttctcagcacagtacgaacacggcat
acgtgcaaacataagcaaacgccaattaaaaggaaagagcagttactggaggattccaca
gaagacttggattacggttttctgtctaattacaaacttctcaacactgccattacaaga
gcacaatccttggtagctgtggtgggagatcctattgctttatgttccattgggagatgc
aggaaattttgggaaaggtttattgccctgtgtcatgagaacgaaagtctccacggtatc
acgtttgaacagatcaaagctcagctggaagctctggagttaaagaaaacttatgtcttg
aatccactggctcctgagttcatcccccgagctcttcggcatcaacattcagcgaatgcc
accaaacagcagcagtcaccaccaaagggcaaggtccatcatcacaaccagaatgaccat
ttcccacccgatggaattgttcagcccaatccttctgttctaatcggaaatcctatccgg
gcatatactcctccccctcctcctctgggacctcaccccaatctggggaaatctccaagt
cctgttcaaaggatagatccacacactgggacaagtattctatacgtacctgctgtctat
ggaggaaatatggtcatgtctgtgcctttgcccgtaccgtggacggggtatcagggtagg
tttgcagttgaccctcgactcattactcatcaagcagctatggcatataacatgaacctg
ttacaggcacatgggcgcgggtctcctataccttatggcctgggacatcattccccagtt
agcataggacaacagcagcagcttcagcatccagacaaggagcaacacgagcaaagtcga
aacggtaaaagtgaaaacactgctgggcctgaaataagtaaaattcgaacacctgagaag
aaacctgtagaatccaagcaggttgacttagaagcaaattctcagaataggagcccagag
tcacgttccagcgttggttaccccaatgctaaatttcatcgcaaagataatctgaacccc
aggcagctgaacctccatctcacccccccccactcccagtacacagttcccaaccgccac
ttccagcacctctcccagatcccgaggcagccgtatcctctgcaacagcagcaaaacctt
ttaagtcaacagcaaaaccatttgcccgaacaacaaaaccaaatgccagcccagcaaagc
caggtagttcagcagcataatcatttgaatcagcagcctccgcaaccttcgcagctttcc
cctgcttaccaggcaggccccagccagtctttttttaataactcgattccccaccgacca
cattctcctgctgtagatgctgtgatttcagaacaacaccccccacctatgttacaagaa
atcaataatcctttgaggcctatcgcacagcacaaccctgtcctgccaacccacttgaac
aacttcattgaagagaatccatttgggcattagataaatttttgttttaaaactattttt
gtagatcgtatgcatggaaatgtagctttggaaacaataaggcagcaacaacaagccagg
ttacagcaatggaatgaacataatgcctatctcagtcaaggcactattccatatcaacac
catcaccatcctcatctacatcttcctcagcagccagttggattgcatcagcagcagcaa
gttagggcaaactggaaacttgccagtaatacagaagatgaaacagaggcaacatattca
agattccaggatttgctgagagaactgtcacaccgtgatcaaagcgaaagtcgggactta
gctgaaatgccgcccccccagtccagactgttgcaatacagacaagtgcagcccaggagc
ccaccagcactcccgtctccttcctgcaactccaaccacagcgggcacttccccaccttc
accgaaaacaacagagacgttgaactcaccaataacccagcatttcagcagcatttaccc
caaatatacaacccccctttctcaatgccatctgaacatataaccccatctcccttgaaa
tacctacaacctgatggatcgtggacttacgctaacctaccgcagaatcacctcatgggg
cagggctttcattacggcatacctccgctgccccaccggtcgcaacagaacccttttata
caaatcccaaaccatcagcacgcagtcggtcaggagccatttcatccactcacttctcga
gcagtatctgcttcttcgctccacagcttagaagagtatgaaccaagaggaccaggcagg
ccgttgtaccaaagaagaatttcctctagttcagtccaggcttgttctgaagaattaagc
actcctcaagacagtcttggtcagtgtaaagagcttcaggaccacagtaaccagtcatct
ttcaactattcgcctcctgagttgtgggtgaactcctcctcatctgccccatacccaaac
attccatgcaacggagccagcagagcagttccagcccgggagttgttagctccgcccaag
acggtcaagccccccgaggaacacctgaaggccgaaaacatcccgctctccaactccttc
aactacaacgtgctccaacacctgggccagttccctcctctcatgcccaacaagcagttg
gccgagtccagcggcaccggcccgcccagcgccagcatgtcctacgccagcgccctgcgg
gccccgccaaagcccaaaccgccccccgagcaggcgaaaaagaacagcgaccctttgtct
ttgtttcaggaacttagcctaggtagttcatcaggtagcaacggcttttactcctatttt
aaataa
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