Columba livia (rock pigeon): 106145910
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Entry
106145910 CDS
T02912
Symbol
LTN1
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clv03009
]
106145910 (LTN1)
04121 Ubiquitin system [BR:
clv04121
]
106145910 (LTN1)
Enzymes [BR:
clv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106145910 (LTN1)
Ribosome biogenesis [BR:
clv03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
106145910 (LTN1)
Ubiquitin system [BR:
clv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106145910 (LTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-ANAPC11
zf-rbx1
FANCL_C
RINGv
DUF4460
zf-C3HC4_2
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
106145910
NCBI-ProteinID:
XP_021155265
LinkDB
All DBs
Position
Unknown
AA seq
1812 aa
AA seq
DB search
MTTDPSACICDAAFGPGCGSWGWGSRRAATPGLGPWFRGVWPQLPGALVRVLLRGARPSS
SGQAAELLAKERGTVPGFIGFGTSQSDLGYVPAVQGAEEIDSLMDADFRMVLRKLSKRDI
TTKLKAMQEFGTMCKEREVEVVKGVLPYWPRIYCKISLDHDRRVREATQQSFEQLILKVK
KHLAPYLKSIMGYWLIAQCDIYSPAASAAKVAFEKAFLSSKQPEALAFCKDEILNVLQDH
LLKETPDTLSDPQTVPEEEREAKFFRILTSSLLALKKLLSMLPKKEMHSLEEKLMSLLSQ
NKFWKYSKHSMPQVRSAFFEVASAFCQYLPELVKNEAPRVCPAVLLSIDDGDAVVCPALW
EAVLYTIATIEDCWSHVNAKKGVLPKLWTVLREGGRGLAAVIYPNLLPFISKVPPGIAGP
KLEYFRTFFSSVIQGLSSERAITSPSESSAIITAFMECLRFAMLQKIDEDDDQIQIHQML
IYDQLIPLTDAVLKEPRLQNGPLFYQIAETLSSWEAKAEISNDDGTDEVFQKLLSDFWDR
LLKMCVLHVDTLDADEKSLFALSGMLEILQNPKSATKPNNRKALKIRFTDEDESERDTEN
GKLTEVRKSDSEIQADLQHSSLLRKEPLENLVCSLAELSIVYVNEQKSELHLKFLSALLN
SFSSNRVFQVLLEQGNDTSSAQAESQNESEACESPSVQFLHMNLITWLKEDWRKDTHFLV
DILYSVLNCCNSNDERKIILDDLTKMDLQWIIFLQLIQKACSSTTKLSLVSDWLKGDALG
EKLVMLADDLCHLGLKSIAPSSESSSSERWTLLSLVLSQHIKNESLIGETFVERIIDKLQ
AALSKAKDLSEAGNTEPSVSFICDVASSFFSSVKGCLLMPSSEDLLLTIFQLCAQRQDAT
HLTDLLVCKLKHTWMSGVSSLVRQLRSMQKQSTFLHKSALWVKNQIQSSSLDVKSLQVLI
SAVSDLLSKLMEEDGQSGYLVGAYVEHITPNKTEWGKLHESLSTEWICKPLLEGRLSMNC
EPLGSCVKLCGTTKLPGHLCTSALLSKMVLLVLENGVVHGNDDTERKKIDNIIAELLYSL
QWIEELENPPYLLLEYLQMLEEMHITYEKFSTLSNTTSLQQTMLDRSEEHGRLWSLTMAK
VIRVENFGSSELKKPFETTERFPPLTEGRLHTLQCLSPLLTVEENKTLVLHCVSKLLTCP
QTELSSTDGPFGCLSILNSCLNDRTIVADDVLPGILNIIMSWKNDNEDSFLFSCNLKETS
AQLLAFNIEVMRFLPLLLKYHTTPLADNEWDFILCSMLAWLETTSENRLLYHVPLVQIFA
CVSCDLASALSAFFEAAAPETTANLPENLIGEWKEFFSEGIHNLLLPLLVKVTGETKNAS
EGSFQNSVLTSLGEALTYISKDQLLNHKLPAKFVAGQKTNLPDELQTLLNTLCPVLLFPA
RPVQISVYHMLYKLMPELPKFDDEDLKSYGDEEEELALSPPAALMSVLATQERLLEDILE
CIPVGESAVIHPLSDEFCLVLGYLLTWKLTLTFFKAASSQLRVLYSQYFRKTKSLNKLLY
HLFRLMPENPVLSGPTSEVPNKDTKTFFTEEQHLGVKGTGVLSSQIPHLACSVYRTTLKD
LPAMVRLWWNSCEKRVFNIVDKFTSKYVSNVLSAQEISAVQTSTQLFNSMTVKARSATRE
VIATYSVDDIFIELIIQLPSNYPLGSITVESGKRVGVAVQQWRNWMLQLSTYLTHQNGSI
MEGLSLWKNNVDKRFEGVEDCMICYSVIHSSNYSLPKKACRTCKKKFHSACLYKWFTSSN
KSTCPLCRETFF
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atgaccacagatccaagtgcctgcatttgtgatgctgccttcgggcccggttgcggtagc
tggggctggggcagccgccgcgcggcgactcctggcctgggcccgtggtttaggggcgtg
tggccgcaactgcctggggcgttggtgcgcgttctcctgagaggggcaaggccttctagc
agtggtcaagctgcagagctccttgccaaagaacgtggaacagtgcctggatttattggc
tttggaacgtctcagagtgatctaggctatgttcctgcagttcaaggagcagaggaaata
gacagccttatggatgctgattttcggatggtgttgcgaaaactttctaaaagggatatc
acaacaaaattaaaagctatgcaggagtttgggacaatgtgcaaggaaagagaagtggaa
gttgttaaaggtgttcttccttactggccaagaatttattgtaaaatctcactagatcat
gatcgccgtgttcgagaagcaactcagcaatcttttgaacaactgattcttaaagtaaag
aaacacttagctccttacttaaaaagtatcatgggatactggctgattgctcaatgtgat
atttactcccctgctgcttctgctgcaaaagtagcttttgaaaaagcttttctttcaagc
aaacaacctgaagccttagcattctgtaaagatgaaattcttaatgtacttcaagatcac
cttctgaaagaaacacctgatacactcagtgacccccaaactgtaccagaggaagaaagg
gaagccaaatttttccggattctgacctcttccttgttagctttaaaaaagttgcttagc
atgttgccaaagaaggagatgcattcattggaggaaaagttaatgtcacttctgtcccaa
aacaaattttggaaatacagcaaacacagcatgccacaggttcgctcagctttctttgag
gtggcttctgccttttgccagtacttgcctgagctggtgaaaaatgaagcaccaagagtt
tgtcctgctgttcttctcagcattgatgacggtgatgcagtggtgtgtcctgctctttgg
gaagctgtactttatactattgccactattgaggactgttggagtcatgtaaatgccaaa
aagggagttctacccaagctatggacagtgcttcgagaaggtggacggggactagctgcc
gtgatatacccaaatctcttgccattcattagcaaggtacctcctggcattgcaggacca
aagctggaatatttcagaacttttttcagctctgtaattcaagggttgtctagtgagcga
gcaataaccagcccttcagaaagttctgcaattataactgcatttatggaatgtctacgc
tttgccatgctacagaaaatagatgaagatgatgatcaaatacaaattcatcaaatgctt
atatatgaccagctaattcctcttactgatgctgtacttaaggagcccaggttacagaat
ggaccgttattttatcaaatagcagaaacgctgagctcctgggaagctaaagcagaaatc
tccaacgatgatggcacagatgaagttttccagaaactgttgtcagatttttgggaccgt
cttttaaaaatgtgtgtacttcatgttgatacattggatgctgatgagaaatcattgttt
gctctatctggaatgctagaaattcttcagaatccaaagagtgctacaaaaccaaacaac
agaaaagctctaaaaatcagatttacagatgaggatgaatctgaaagggacacagagaat
ggaaagctcacagaagtgagaaagagtgactctgaaatacaggctgatttgcaacatagt
tcacttctaaggaaagaacctttagaaaacttagtctgcagccttgctgaactgagtatt
gtgtatgtcaatgaacagaagtcagaactgcatttgaaatttctctctgccctgcttaac
tcattttcttcaaacagagtttttcaagtacttttagagcagggaaacgatacaagctct
gctcaagccgaatcccaaaacgaatctgaagcttgtgaaagtccatctgtacaatttctg
catatgaatttaataacttggttgaaagaagactggaggaaagacacccattttctggtt
gatattttgtacagtgtgcttaattgttgcaacagtaatgatgaaaggaaaatcattctt
gatgatttaacaaagatggatctgcaatggattatttttctccagttaattcaaaaggca
tgctcaagcacaacaaaactttctttagtctctgactggctgaaaggagatgcacttgga
gaaaaacttgtaatgctggcagatgatctctgtcacctgggtttaaaatctatagcccct
tcgtcggaatcatcctcttcagaaaggtggaccctcctgagtttggtgttgtcacaacac
ataaaaaatgaatctttgattggtgaaacttttgttgaaaggattattgataaacttcaa
gcagctctgtcgaaagctaaggatctttctgaagctggaaatactgaaccatcagtatct
ttcatctgcgatgtagcttcaagctttttcagctcagttaaagggtgtttactgatgcca
tcctctgaagacttgctgcttaccatcttccaattgtgtgctcagaggcaggatgctacg
cacttaacagatttacttgtatgtaaattaaaacacacttggatgtctggtgtaagttca
cttgtgcgtcaacttcggagtatgcagaaacagagtacctttttgcataaatctgcactg
tgggtcaagaatcaaattcagtcttcctctttggatgttaaaagccttcaggttttgatc
tctgcagttagtgatttgttgtctaagcttatggaagaggatggacagtctggatatctt
gtgggagcttatgttgagcacatcacgccaaacaaaactgagtgggggaaattgcacgag
tctctctccaccgagtggatatgcaaacctcttttggaaggacggcttagtatgaattgt
gaacctttgggatcatgtgtcaagctgtgtggcacaactaaacttccaggccatctgtgt
acttcagccttattaagtaaaatggtgctacttgtattggaaaatggcgtagtccacgga
aatgatgatacagagagaaagaaaattgacaatataattgcagagctgttgtactcatta
caatggattgaagaattggagaatcctccttatctgcttctggaatatcttcagatgtta
gaagaaatgcacatcacatatgagaagttcagtacacttagtaatacaaccagccttcag
caaaccatgttagatagatcagaggaacatggaagactctggtcattaaccatggctaaa
gtgattcgcgtggaaaacttcggatcctctgagttgaagaaaccttttgagacaacagaa
aggtttccgccgttaacagagggcagattgcatacacttcagtgtctatcgcctcttttg
actgtagaagaaaacaaaacacttgtcttacactgtgtgagcaaacttttgacgtgccca
cagacagagctttccagtactgatgggccatttgggtgtctttccattttgaactcctgc
ttgaatgacagaactattgttgctgatgatgtactacctggaattctaaatatcataatg
tcttggaaaaatgataacgaggacagctttctctttagctgcaatctgaaagaaacgagt
gctcagttgcttgctttcaacatcgaggtgatgcgtttccttcccttgctgctgaagtat
cacacgactccgttggccgataatgaatgggactttatcctgtgctctatgctggcttgg
ttagagacaacaagtgaaaaccgtttgctttatcatgtcccgcttgtgcagatttttgct
tgtgtcagttgtgacttggcatctgcccttagcgctttctttgaagcagcagctcctgaa
actactgcaaaccttcctgagaacttgatcggtgaatggaaggaattcttttctgaggga
attcacaatttgctcttacctttgttggtgaaagtcacaggagaaaccaaaaatgcatct
gaaggctcctttcagaactctgtgttaacgtctttgggtgaagctctaacgtacatctca
aaggaccagttgttaaaccataaattgccagcaaagtttgttgcaggccagaaaacaaat
cttccagatgaactccagactctactaaatacgttatgtccagtgttgcttttcccagct
agacctgtacagatttctgtctaccatatgttgtataaattaatgcctgaattgcctaaa
tttgatgatgaagatctcaaatcttatggtgacgaagaggaggaattggcattatcacct
ccagcagctcttatgtctgtcctggccactcaagaacgcttgctagaagacatcctggaa
tgcattccagttggagaatctgcagtaattcatcccctgagtgatgagttctgccttgtt
ctaggatatcttctcacttggaagttaaccttaactttcttcaaagcagcttcttctcag
ctgcgagttctctactcacaatacttcagaaaaactaaaagcttgaataaactgctttat
cacttgttcaggcttatgcctgaaaaccctgtcttgtctgggccaacttcagaagttcca
aataaggacacaaaaactttctttactgaagagcaacatttaggtgttaaagggacagga
gtcctgtcatcccagattccgcacttggcctgctccgtgtaccgtacaacactgaaagac
ttgccggccatggtcaggctctggtggaacagctgcgagaaacgagtcttcaacattgta
gataaattcacaagcaaatatgtcagcaatgtgctttcggcacaggaaatatctgctgtt
cagactagcacgcagttatttaacagcatgacggtaaaagctcggtctgccacacgggaa
gtgattgccacctattcagttgatgatatatttattgaactaataatacagcttccatca
aattacccactgggatccataacagtggagagtggaaagagggttggtgtggctgtacag
caatggcgtaattggatgctacagttaagcacgtatcttacacatcagaatggaagtatt
atggaaggcttatctttgtggaaaaacaatgtggataaacgttttgagggcgttgaagat
tgtatgatctgttattcagtcattcatagttccaactattctcttcccaaaaaagcttgc
agaacatgcaagaaaaagtttcattcagcttgcttgtacaaatggttcacatccagcaac
aaatccacctgtccactctgtcgagagacatttttctga
DBGET
integrated database retrieval system
