Columba livia (rock pigeon): 110356375
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Entry
110356375 CDS
T02912
Name
(RefSeq) collagen alpha-1(XXV) chain-like
KO
K24356
collagen type XXV alpha
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
clv00536
]
110356375
Glycosaminoglycan binding proteins [BR:
clv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110356375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
110356375
NCBI-ProteinID:
XP_021138772
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MMQEKVERLLAQKSYEHLAKIRVAREAPPECNCPPGPPGKRGKRGRRGETGPPGLPGRNG
YPGPIGMDGKLGQPGPQGPPGPKGEKGDQGDQGPRGLPGFPTVAALHSNQILTVKGDQGQ
AGPPGPPGPPGPRGPPGDTGKDGPRGMPGIPGEPGKPGEQGLTGPQGPPGQKGSVGVPGV
PGRDGQVGEPGLPGIAGEKGEAGLKGDPGERGEKGDAGENGPKGDTGEKGDPGSSAAGIK
GEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGDRGETGPVGKG
ERGEPGVPGPKGKTGEPGSRGPKGSKGDTGDRGDTGSAGPRGPPGQKGDQGATEIIDYNG
NIHEALQRIATLTVAGPPGPPGPQGLQGPKGETGSPGTPGVDGEQGPKGSKGDSGDPGMP
GDKGGPVSINFGLNTGIILSSTIRNFQQC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggagaaagtggagcgacttctagcccagaaatcctacgagcacttggcaaaa
atacgagtagcgagagaagcgcctccagagtgcaactgcccaccaggtcctccagggaaa
agaggtaagcggggcagaagaggagagactggacctcctggtctaccagggcgaaatggc
tatccgggtccgattggtatggatggaaagctgggtcagcctggtcctcaaggccctcct
ggtccaaaaggcgagaagggagatcaaggtgatcagggccctcggggcctgccaggcttc
cccacagtcgctgctctgcacagtaatcagatcctcaccgtcaagggggaccaaggacaa
gctggaccccctgggcctccagggccaccaggacccagaggtcccccaggagacactggc
aaagatggtcctcgtgggatgcctggcataccgggtgagccaggaaaaccaggagaacaa
ggactgacaggacctcaggggcctccaggacaaaagggttctgtcggagtgcctggtgtt
ccagggagagatggacaagtgggtgaacctggtttgcctggcatagcaggagagaaagga
gaagcagggctcaagggtgaccctggagaaagaggagaaaagggtgatgctggagaaaat
ggaccgaagggtgacacaggagaaaagggtgaccctggttcttctgctgcaggaattaag
ggtgaacccggtgaatctggacggcctggacaaaagggtgaaccaggtctccctggcctt
cctggactccctggaataaagggtgaaccaggtttcattggtccgcaaggagagcctggg
ttgccagggctgccaggaacaaagggtgaccgaggagagacaggccctgttgggaagggt
gagcgaggtgaacctggagttcctggaccaaagggaaaaacaggtgaacctggatctaga
ggcccaaaagggtcaaagggtgatacaggtgacagaggtgacacaggatctgcaggtcca
cggggaccacctggacagaagggtgatcaaggtgcaacagagataattgattataatggc
aatatccatgaagctttgcagaggattgccactctgactgtcgcggggccaccaggacca
ccgggacctcaagggctgcaagggccaaagggtgaaacaggatccccaggaactccagga
gttgatggggagcagggtcctaaaggttcaaaaggagattcaggtgatcctggaatgcct
ggagacaagggaggaccagtgagtattaattttggcttaaatactggtattattctctct
tccactatcaggaatttccagcagtgctga
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