KEGG   Colossoma macropomum (tambaqui): 118813883
Entry
118813883         CDS       T09004                                 
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b
  KO
K14966  host cell factor 1
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao03083  Polycomb repressive complex
cmao04980  Cobalamin transport and metabolism
cmao05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    118813883 (hcfc1b)
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    118813883 (hcfc1b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118813883 (hcfc1b)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cmao01009]
    118813883 (hcfc1b)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmao03036]
    118813883 (hcfc1b)
   03029 Mitochondrial biogenesis [BR:cmao03029]
    118813883 (hcfc1b)
Protein phosphatases and associated proteins [BR:cmao01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     118813883 (hcfc1b)
Chromosome and associated proteins [BR:cmao03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    NSL complex
     118813883 (hcfc1b)
   HMT complexes
    COMPASS/SET1 complex
     118813883 (hcfc1b)
    MLL-HCF complex
     118813883 (hcfc1b)
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     118813883 (hcfc1b)
Mitochondrial biogenesis [BR:cmao03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    118813883 (hcfc1b)
SSDB
Motif
Pfam: Kelch_3 Kelch_5 Kelch_4 Kelch_1 Kelch_6 fn3
Other DBs
NCBI-GeneID: 118813883
NCBI-ProteinID: XP_036435370
LinkDB
Position
Unknown
AA seq 1930 aa
MASPGTGTATSGASGTVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVD
ELHVYNTATNQWFIPAVRGDVPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASR
WEWKRLKPKAPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLE
LRPGSNVTGWDIPITYGVLPPPRESHTAVVYTEKTSKKSRLVIYGGMSGCRLGDLWTLDI
DTLTWNKPGISGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLA
CLNLDTMTWESILMDTLEDNIPRARAGHCSVAINSRLYIWSGRDGYRKAWNNQVCCKDLW
YLETDRPHAPSRVQLVRANTSSLEVSWGAVPTADTYLLQLQKYDIPAATAATSPNVTPTS
SLPANSPKSPAPAAAAPASQSMPLTGVTLVQQTPSPTTSMPGSPLAAASPRGPAILKVAA
PQSTAGTSIVTVRQANQVGKSPVTVTSLPAGVRMVVPAQSTQGTPIGSSPQMSGMAALAA
AAAATQKIPPSSAATVLNVPAGATIVKTVAVTPGSTTLPATVKVASPVMVSNPATRMLKT
AAAQVGTSTISTPNTPTRPVITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVKSPLTVGS
GGTLISSLGKVMSVVQTKPVQTSAVTGQAGSSPVTQIIQTKGPLPAGTILKLVTSADGKP
TTIITTTQAGGTGTKPTILGISGVSPSTATKPGTTIIKTIPMSAIQQGAAGAAGSPGLKS
PITIITTKMVTPGTGTPGKIITAVPKLTTGTGQQGVTQVVLKGAPGQPGTILRTVPMGGV
RLVSPGAVSGVKPTVTTLVVKGTTGVTTLGTVTGTVSTSLAGGNVVTSNASLATPITTLG
NIATLSSQVISPTAITVSAAQTSLTTASSVALQAAAQPTQVTLISTPSGVEAQPVQDLPV
SILASPTSEQPSSTGAEASETTGEVTLVCSNPPCETHETGTTNTPTVAAAKICSNPPCET
HVTGTTNTTTTASANMGRVQQVCSNPPSETHDTGTTNTATTASCSMGSLEMGVVNSSTAS
QQSTMTSPGSTLLSPVCSNPPCETHETGTTNTPTQASSSMGSGQTNTVQRVCSNPPRETH
ETGTTNTPTQASSSMGSGQTNTVQRVCSNPPRETHETGTTNTPTQASSSMGSGQTNTVQR
VCSNPPRETHETGTTNTPTQASSSMGSGQTNSVQRVCSNPPRETHETGTTNTPTQASSSM
GSGQTNTVQRVCSNPPCETHETGTTNTPTQASSSIGAVQNGAVQRVCSNPPCETHETGTT
NTATTATSSLESAEDTAQQSAEGQEDSGTSVEATSSTEPANPTIQSRAVTMVTQATPTPG
PSVPEISSMAGSAAIVEASGEGEAEAMEQGDSEAVATGEEPMQTEGELGEEGTVRVVAIE
QGASGEAGTMLQVHVAMEAQPGQGEQAEMEQGGEGEEAVGLAGQNSEALALPQELMSAEG
QPTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVLNEGDAGQDGQ
QSTTIPIVLTQQELAALVEQQQQLQEAQAAAAAAQQLAADSGSTALPTEGLAPADSLNDP
TSESNGHEMTAAAVVTGAVARLLPSTTAETLAPSSTFAPSQPMAVASPAKMQAATALTEV
ANGIESAAGKQGPPPAVVKPPVKKENQWFDVGIVKVTNMVVTHYYMPADDSEVTDDDSGT
IPDYSQMKKVELSPGTAYKFRVAGINACGRGTFSEVSAFKTCLPGFPGAPCAIKISKSPD
GAHLTWEPPSVTSGKIIEYSVYLAIQSSQTTEAKASAPAQLAFMRVYCGPNPSCLVQTSS
LSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSKDGSAAKPAVKRPVSSPDVKG
IGVKKARADQ
NT seq 5793 nt   +upstreamnt  +downstreamnt
atggcttctcctggtactggtactgcgacgtctggcgcttcgggcacggtgctgcagccc
cggtggaagagggtgctgggctggtccggcccggttcctcgccctcggcacggacatcgg
gctgttgctatcaaggagctcatggtggttttcggcggcggcaatgaaggaatcgtcgat
gagctccacgtatacaacacagctaccaatcagtggtttattccggctgtccggggtgat
gttccacctggctgtgctgcttatgggtttgtgtgcgatggcacacggctgctggtgttc
gggggcatggtggaatatggaaagtacagcaatgatttatatgaactacaggccagtaga
tgggagtggaaacggctgaagcctaaagctccaaagaatggcccgccgccctgtccccgc
ctgggccacagcttctccctggtgggaaacaaatgctacctgtttggaggcctcgccaat
gacagcgaggatcccaaaaacaatattccaagatacctaaatgacctatacacactcgag
ctgcgtcctggctctaatgtaacaggctgggacatccccatcacgtacggcgtgctgccc
cctcctcgcgagagccacactgccgtggtttacacagagaaaacctctaagaagtcccgg
cttgtcatctacggaggcatgagtggctgccggctcggagacctctggacgttagacata
gacactctgacctggaacaagcctggcatcagcggcacagctcctctccctcgcagcctt
cactcagcaacaactataacaaacaagatgtatgtgtttggcgggtgggtgcccttggtg
atggatgatgtgaaagtggctacacacgagaaggaatggaagtgcacaaacacactggct
tgcctaaaccttgacacaatgacatgggaatccattttaatggacactctggaagacaac
atcccgagggccagagcaggccactgctctgtagcaattaattccaggctgtatatctgg
agcggcagggatggctaccgcaaggcctggaacaaccaggtgtgctgcaaagacctctgg
tacctggagacagaccgcccccatgcaccgtcacgagtgcagctggtccgtgccaacacc
agctctctggaggtgagctggggtgcggtgcccaccgccgacacctacctgctgcagctg
cagaaatatgacatccccgccgcaacagcggccacctctccaaatgtcactcccacttcc
tctctaccagccaactcgcctaagagtccagccccggctgctgctgcccctgcctcacag
agcatgcctctcactggcgtcacacttgttcaacagactccatcgcctaccacttccatg
cctggcagcccacttgctgcagcctcaccccgaggtccagccattctaaaggtggctgca
cctcagtcgaccgctgggacctccattgtcactgtacgtcaggccaatcaagtggggaag
tctccagtcactgttacatcacttcctgcaggagtccgtatggttgtccctgcgcagagc
actcagggaacaccgattggcagcagcccacagatgagtggcatggctgccctggctgca
gccgccgccgctacacaaaagataccgccctcctctgcggccactgtgctgaatgttcca
gccggagccaccatagtcaagactgttgctgtgactccaggctctacaactctaccagct
actgtgaaagtggcttcgccagtgatggtgagcaacccagcaacccgcatgctgaagaca
gctgctgcccaggttgggacatcaaccatctctactcccaataccccaacccgccccgtc
attactgttcacaaatcgggcactgtgacggtagcccagcaggcccaggtggtcacaaca
gtggttggtggtgtcaccaaaacaattaccctcgtcaagagccccctcactgttggcagt
ggtggaactctgatctctagcctggggaaggtgatgtctgtggtccagaccaaaccagta
cagacatctgcagtaactggtcaagccggtagtagtcctgtcactcagatcatacagaca
aagggtcctctacctgcaggcaccatcctgaagctggtcacctctgcagatggcaaaccc
accactatcatcacaaccacgcaggcaggtggcactggcaccaaacccactatcttgggc
atcagtggagtctccccaagcacagccaccaaacctggcaccaccatcatcaaaaccatc
cccatgtctgccatccagcagggagctgcaggtgctgccggtagccctggcttaaaatct
cccattaccatcatcaccaccaagatggtgacacctggcactggcacaccaggcaaaatc
attacagctgtaccgaaactgaccacaggaactggccaacagggggtgacacaggtggtc
ttgaaaggggcacctggacaacctggcaccattctgcgcactgtgcccatgggtggcgtg
cgtcttgtttctcctggtgctgtttctggagtcaaacccacagttaccacactagtagtc
aaaggcaccacaggagtaactactcttggcacagtgaccggcacggtctccaccagcctg
gcagggggcaatgttgttacttccaatgctagcctggctactcctataaccaccctgggt
aacattgcgacactatccagtcaggttatcagccccacagccatcacagtgtccgcagct
caaacaagcctgactactgcgtcctctgtggccctgcaggcagcggcgcaaccaactcag
gtgactctaattagcacccctagtggtgtggaggcgcaacctgtgcaggatcttcctgtc
tccatcctggcatctcccacctctgagcagccctcctccacgggggcagaagccagcgag
accacaggtgaagtgactctggtgtgctccaacccaccctgcgagactcatgaaactggc
accaccaacacacccactgtggctgctgccaagatatgttctaacccaccctgtgagacg
catgtgacaggtaccaccaacacgacaactacggcctcggccaacatgggacgtgttcag
caggtgtgcagcaatcccccgtcagagacccatgacacaggcaccacgaacacggccact
actgccagctgcagcatgggctcccttgaaatgggggtcgttaatagcagtacggcgtcc
caacagtccaccatgacctcacctggaagtacacttctgtctccggtatgttctaatcct
ccatgcgagacgcatgagacgggaaccactaacacacccacacaggcgtcctcgagcatg
ggcagtgggcagaccaacacagtacagagagtatgttccaacccgccccgtgagacacat
gaaacgggcactaccaacacacccacgcaggcgtcctcaagtatgggcagcgggcagacc
aacacagtacagagagtatgttccaacccgccccgtgagacacatgaaacgggcactacc
aacacacccacgcaggcgtcctcaagtatgggcagtgggcagaccaacacagtacagaga
gtatgttccaacccgccccgtgagacacatgaaacgggcactaccaacacacccacgcag
gcgtcctcgagcatgggcagtgggcagaccaactccgtacagagagtatgttccaacccg
ccccgtgagacacatgaaacgggcactactaacacacccacgcaggcgtcctcaagtatg
ggcagcggacagaccaacactgtgcagagagtatgttccaacccgccctgcgagacccac
gagaccggcaccaccaacacacccacccaggcttcatcctccatcggagctgtgcaaaac
ggcgcagtgcaaagagtgtgttccaatccaccctgcgaaactcacgagaccggaaccacc
aacacagccactactgccaccagcagcctggagtcagccgaagacacagctcaacaaagt
gctgaaggacaagaagacagtggcaccagtgttgaggcaacttcatccacagagcctgcc
aatcctacaatccagagcagagctgtcaccatggtgactcaggccacacccaccccaggg
ccctctgtcccagagatctcatccatggcaggttctgctgccatagtggaggcctcgggt
gaaggtgaggcagaggcgatggaacagggtgactcggaagcagtggcaacgggcgaggag
cccatgcagactgaaggcgagctgggtgaagagggcaccgtcagagttgttgctattgaa
cagggtgcttccggtgaggcaggaaccatgctacaggtgcatgtagccatggaagcgcag
cctggtcaaggcgaacaggccgagatggagcaaggtggagagggtgaagaggccgtgggt
ctggccgggcaaaactcggaggctttagcactgccccaagagctgatgtctgctgaggga
cagcccacaacattgatggtgacaggactgaccccagaggagctggctgtcactgcagca
gcagaagctgctgctcaggctgcagccacagaggaggcccaggccctcgccatacaggct
gtgctgcaggcagcccaacaggctgtgctgaatgaaggggatgctggacaggatggtcag
cagtcaaccaccatccccattgtgctgacacagcaggagctggctgctctcgtcgagcag
cagcaacagctgcaagaggcccaggctgcagcagccgctgcccagcagctggcggctgat
tcaggttccacagctctgcccaccgagggcctcgcccccgcagacagtctaaacgacccc
acgtccgaaagcaatggccacgagatgactgctgctgctgtagtcaccggagctgtggct
cgacttcttcccagcacaactgcagagactttggctccatcgagtacatttgccccatcc
cagccaatggcagtggctagccctgctaagatgcaagcagctactgctcttaccgaggtg
gccaatggcatagaatctgcagctgggaagcaaggaccgccccctgcagttgtgaaacca
ccagtaaagaaagaaaatcagtggtttgatgtcggaattgtcaaggtgaccaacatggtt
gtcacacattattacatgccagcagatgattcggaggttactgatgatgattctgggacc
ataccagattacagccaaatgaagaaagtggagctttctcctggcacagcgtacaagttc
cgagtggctggtattaacgcttgtggccgtggaaccttctctgaagtgtcagccttcaaa
acctgtctacctggtttccctggagcaccatgtgccattaaaatcagcaagagcccagac
ggcgctcacctcacatgggagcccccatcagtaacatcggggaagattattgagtattca
gtctacctggctatccagagctcgcagacaaccgaggccaaagcgtctgcgcctgcgcag
ctagctttcatgcgtgtgtactgtgggcccaatccctcttgtctggttcagacttccagc
ctgtccaatgcccacattgactacaccaccaaacctgcaattatcttccgcatcgcagct
cgcaacgagaaaggctatggccctgccacgcaagtcaggtggctacaagaaaccagtaag
gatggatctgctgccaaacctgcagtaaagagaccggtctcatctcctgatgtgaaaggt
attggtgtaaaaaaggcccgagctgaccagtga

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