Cucurbita maxima (winter squash): 111473264
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Entry
111473264 CDS
T05246
Name
(RefSeq) ATP-dependent helicase BRM
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111473264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111473264
03036 Chromosome and associated proteins [BR:
cmax03036
]
111473264
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111473264
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
111473264
Chromatin remodeling factors
BAF complex
111473264
PBAF complex
111473264
GBAF(ncBAF) complex
111473264
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
QLQ
HDA2-3
AAA_14
Bromodomain
Motif
Other DBs
NCBI-GeneID:
111473264
NCBI-ProteinID:
XP_022974568
UniProt:
A0A6J1IGN1
LinkDB
All DBs
Position
Unknown
AA seq
2256 aa
AA seq
DB search
MQSGGGGPIRNPGFPAGRAASTSSAASPSSSSSAVSTPHLGFDSMQQQQQQQQQQQLASR
QSLQHQLLRKSDGNEALLSYQAGGLQGVLAGNNFPQSPGSSHLPQQARKFIDLAQQHHSS
SQEGQNRSQGLEQQALNHPVHQAYLQYAMAAQQKSAMAMQSQHQAKMGIMSPHSIKDQEM
RMGNQKIQDLIPAQGSNQASTLSKNPSDLVRGEKQMEQGQPSTSDQRADPKSSSQLPGMS
NLMHVNMTRPMQAPQAQQGIPNVANNQLAMAQLQAMQAWALERNIDLSQPANATLMAQLI
PLMQSRMVAQQKANENNMGSQSSPASVSKQQINSPFSGKEASAHANSLNDVLGQSSSTKS
RQIASPSPFGQNMNGSVVNNTSHASMQQFSIPGVENQLPSRLPVSGNTIPPVLPSESSGN
VNQSIEHSLQGKTSLSSPDNLQTQYVRQVNRSSPQPALPTSDGGPSNSTLSQSGHSNQTA
QQRFGFTKHQLHVLKAQILAFRRLKKGEGTLPQELLRAIAPPPLDVQLQQQFLPPGGSSQ
DKPSGKIVEDTRNVEASEKDSLSLASSNGHRFPREVSTGDEKSKMSTSDMQPPMPLAMKE
TVPSGSTGKEEHQATVSVKSDQEIDRGSQKPQGKSDFPVERGKAVANQAAVPDVTQVKNP
APPSATPQSKDVGAARKYHGPLFDFPYFTRKHDSFGSAVAVNNNNNLTLAYNVKDLLFEE
GLEVINKKRTENLKKIGGLLAVNLERKRIRPDLVVRLQIEEKKLRLLDLQARLREEIDQH
QQEIMAMPDRPYRKFVRLCERQRMELARQVQASQKAMREKQLKSVFLWRKKLLEAHWAIR
DARTARNRGVAKYHERMLREFSKRKDDDRNRRMEALKNNDVERYREMLLEQQTSMPGDAA
ERYSVLSSFLTQTEEYLHKLGSKITAAKSQQEVAEAANIAAAAARLQGLSEEEVRAAAAC
AGEEVMIRNRFMEMNAPKDSSYVNKYYNLAHAVNERIARQPSMLRAGTLRDYQLVGLQWM
LSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTW
LPSVSCIFYVGGKDERSKLFSQEVCALKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQ
RMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSK
PFQKEGPTPNAEDDWLETEKKIIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRM
SAMQSAIYNWIKSTGTLRVDPEDEKLRVQKNPNYQPKVYKTLNNRCMELRKTCNHPLLNY
PYYGDLSKDFLIRSCGKLWILDRILIKLEKTGHRVLLFSTMTKLLDILEEYLQWRRLIYR
RIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEE
QAVARAHRIGQTREVKVIYMEAVVDKISSHQKEDELRSGGSGDLEDDFAGKDRYMGSIES
LIRNNIQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLQEVN
RMIARSEDEVELFDQMDEELDWTEEMTRYDQLPKWLRASTREVNNVIANLSKRPSKNILF
SGGYGLESSELGSDSSLRTERKRGRPKGKKIPNYKEMEDDNGEFSEASSDERNDYSVQEE
EGEVAEFEDDEFNRDIEATQVIKDQLEDGPACDAMYDYRRASESTRNNHLLEEAGSSGSS
SSSRRLTQLVSPISSQKFGFLSALDARPSSLSKRLPDDLEEGEIAMSGDSHMENQQSESW
IHDRDDGEEEQVLQPKIKRKRTLRLRPRPPVERREEKIYGETQSLQYGDSSSPSPFRADH
KFNKFKNDPEAKPYGDSNSLKREQSESSSKTRRNLSTRRMAPTSKLHSSPKSSRLNSLTG
SAEDAVEHSRESWDGKPLTAGGSSAFGSKMPDIIQRRCKNVISKLQSRIDKEGHRIVPLL
TDLWKRIENSSLPSGVSNNILDLRKIDQRVDRLEYNGVMELVFDVQFMLKGAMQFHGFSY
EVRLEAKKVHDLFFDILKIAFPDTDFREARNALSFSSPGTSTAASLRERPVSQTKRQKMI
KDMDTNSGTSPKSLQRGPMSGEETRATRGHLFTQKESRFGSGSGSKDQYQMQEPPLLTHP
GELVICKKKRKDREKSIVKPKTGSSGPVSPPIVARGNRTSGPGSVSKDSKQCQPSPHSQG
WPNQPQSSSGGGGPVSWANPVKRLRTDSGKRRPSHI
NT seq
6771 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcgggtggaggtgggcccatccggaatccggggtttccggccggacgggcggca
tcgacatcatcggcggcgtcaccgtcgtcatcgtcgtcggcggtgtcaacgccgcatttg
gggtttgattcaatgcagcagcagcagcaacagcagcaacagcagcagctggcgtctagg
cagtcgctacaacaccaattacttagaaaatctgatggaaatgaagcccttctatcatat
caagctgggggtctccaaggagttctagctgggaataattttcctcagtcacctggttcc
tcacatttacctcagcaagcaagaaaattcattgatctggctcaacagcaccatagttct
tctcaagagggccaaaacagaagccaaggtcttgagcagcaagcactgaatcatcctgtg
catcaagcttatctgcaatatgccatggcagctcagcagaagtctgctatggcaatgcaa
tcacagcatcaggctaaaatgggaattatgagccctcactctattaaggatcaagagatg
cgaatgggaaatcagaaaattcaggatcttattccagctcagggctctaatcaagcatcg
actttatctaaaaacccatcagatcttgtacgtggtgaaaaacaaatggaacagggacaa
ccgtcaacttctgatcagagagctgacccaaaatcttctagccagctacctggcatgagt
aatttgatgcatgtgaatatgacaaggcctatgcaggcaccacaagctcaacagggaatc
cctaacgtggcaaacaatcagcttgccatggctcagttgcaggcgatgcaagcatgggct
cttgaacgcaatattgatctttcacaacctgcaaatgcaaccttgatggcacagcttatc
ccactgatgcagtctagaatggttgctcaacaaaaagcaaatgaaaataatatgggatca
cagtcatcacctgcttctgtctccaagcagcagattaattctccgttttctgggaaagag
gcttctgcccatgctaattcattgaacgacgtgcttggacagtctagcagcacaaaatct
aggcagatagcttcaccgagcccctttggtcaaaacatgaatggcagtgttgttaacaac
actagccatgccagcatgcagcagttcagcattcctggcgtggaaaaccagttaccttcc
aggttaccagtttctggaaatacaatacctccagtgcttccttctgaatcttctgggaat
gtgaaccaaagcatcgaacattccctgcaaggaaaaacatcgttaagtagtccagataat
ttgcaaacgcagtatgtcaggcaggtgaatcgatcctctccacaacctgctcttcctact
agtgatggaggtcctagcaattcaaccttatcacaaagtggtcactctaatcagacagca
caacagcgatttgggtttaccaaacatcaattgcatgtcttaaaagctcaaattttggca
tttaggcgactaaagaaaggagaaggtacactcccacaagagcttctaagggctattgct
cctccacccctggatgtgcagctgcagcagcaatttctacctcctggtggtagtagtcag
gataaaccatctggaaagattgtggaagataccagaaatgtggaggctagtgagaaggac
tccctgtctcttgcatcaagtaatggacatagatttccaagagaagtctcaactggggat
gaaaaatcaaagatgtcaacttcggacatgcaacctcctatgcccctagcaatgaaggaa
acagtaccttcgggatctactggaaaagaagagcaccaggcaacagtctctgttaaatca
gatcaggaaattgatcgtggtagccaaaagcctcaaggtaaaagtgattttccagtagaa
aggggaaaggctgttgcaaaccaagctgctgtaccagatgttacacaagttaaaaatcct
gcaccacctagtgcgacaccccaatcaaaagacgttggcgctgctaggaagtatcatgga
cccctatttgacttcccatacttcactaggaagcatgactcatttggttcagcagtggca
gttaataacaataacaatttaacgttggcttataatgtaaaagatcttctttttgaggaa
ggtctggaagttattaataagaaaaggacagaaaacttaaagaaaattggtggtttgctg
gctgtcaacttagagcggaaaagaatcagacctgatttggtagtacgcttgcaaattgaa
gaaaagaagcttcgacttctagatctacaggcacgtctaagggaggaaattgatcaacat
cagcaagagataatggcaatgcctgataggccctatagaaagtttgtgcgcctatgtgag
cgacaacgtatggagctagctcgacaagtacaagcctcacagaaagccatgagggaaaag
caactgaaatctgtctttttatggcgtaaaaaacttctagaggctcactgggccatccgt
gatgcacggactgcacgtaacagaggagttgcaaaatatcatgagagaatgttgagggaa
ttctccaaaagaaaagatgatgataggaacagaaggatggaagctttaaagaataatgat
gttgaaagatatagagaaatgttgttggagcagcagacgagcatgcccggtgatgctgct
gagagatattctgttctctcatcatttttgactcagactgaagaatatcttcataagcta
ggaagcaaaataactgctgccaagagtcagcaggaagtggcagaggctgcaaatattgct
gcagctgctgcccgattgcagggtctttcagaagaagaagttagggcggcagctgcttgt
gcaggagaggaggttatgattagaaaccgttttatggaaatgaatgctcccaaggatagt
tcatatgtgaacaagtactataaccttgctcatgctgtgaatgagagaattgcgagacaa
ccgtcaatgttacgggctggaaccttaagagactatcaacttgttggattgcaatggatg
ctttcactatataacaataaattaaatggaatcttggcagatgagatgggtcttgggaag
acagttcaggtcatggcattgattgcttatttgatggaatttaaggggaactatggacct
catcttataattgtccccaatgctgttttggtcaattggaagagcgagcttcatacttgg
ctaccatccgtgtcttgcattttttatgttggtgggaaggatgaacggtcaaaattattt
tcacaagaggtttgtgccttgaaatttaatgttcttgtgacaacttatgagtttatcatg
tatgatcgctcgaagctttctaaaattgattggaagtatattataattgatgaagcacaa
agaatgaaggatagggaatctgttctagctcgtgaccttgataggtacagatgccagagg
cggttgctccttactgggacaccattacagaatgatttgaaggaactttggtcgctgctt
aatcttcttctcccggaagtgtttgataatcgaaaagcttttcatgattggttttcgaaa
ccctttcagaaggaaggccccacgccgaatgctgaagatgattggcttgagactgagaaa
aaaattattataatccatcgtcttcaccaaattcttgagccttttatgctccgtcgtcgt
gttgaagatgttgaaggatcacttccgccaaaggtttccatagtgttgaggtgtaggatg
tcagccatgcagagtgccatatataactggattaagtccactggtactcttcgtgttgat
ccggaagatgagaaactcagggttcaaaaaaatccgaattaccaacctaaggtttataaa
accttaaataacagatgtatggaactgaggaaaacttgtaaccaccctttgcttaactat
ccatactatggtgacctctccaaagacttcctgataagatcgtgtgggaaactgtggata
ctggataggatccttataaaactagagaagacggggcatagagtactactttttagcaca
atgacaaaactacttgatatattagaggaatacttgcaatggcggcgactcatatataga
agaattgatggaacaactagtttggaggatcgtgaatctgccatagtggacttcaatagc
cctgactcagactgctttatattcttgctgagtattcgtgctgctggtcgtggtcttaat
cttcagtctgccgacactgttattatttatgaccctgatcccaaccctaaaaatgaggag
caagctgttgctagagcccaccgtattggacaaacaagagaagtcaaagtcatctacatg
gaagcagtggttgacaaaatctctagtcatcagaaagaagatgagctaagaagtggtggg
tcaggtgatttagaagatgattttgctggtaaggatcgatatatgggatctattgagagc
cttataagaaataatattcagcaatacaagatagatatggcagatgaggtcatcaatgct
gggcgttttgaccagagaacaacacatgaagagaggcgcctgactttagagacattgttg
catgatgaagagcgatatcaagaaactgtccatgatgtaccttcacttcaggaggtgaat
cgaatgattgctagaagtgaagacgaggtcgaactgtttgatcaaatggatgaagaactt
gattggacggaggaaatgacaaggtatgaccagttacctaagtggcttcgagctagtact
agagaagtgaataatgttattgctaatttatcaaaaagaccttcaaaaaacattttgttt
agtggtggatatggcttggaatccagtgaacttggatctgattcatccctaagaactgaa
agaaaaagaggccggccaaagggtaaaaagattcccaattacaaggaaatggaggatgat
aatggagagttctcagaagcaagttctgatgagagaaatgattactctgtccaggaagaa
gagggagaagttgcagagtttgaagatgatgaatttaatagagatattgaggcgacacaa
gttattaaggatcagctagaagatggtccagcttgtgatgccatgtatgactatcgtcgg
gcttcagaaagcacaagaaataatcatttgctcgaagaagctggctcttcaggctcctct
tccagcagtcgaagattgacacagttggtgtctcctatttcttctcagaaatttggcttc
ttgtctgccttagatgccaggcctagttccctttcaaaaagactgccagatgacttagaa
gaaggggaaattgcaatgtctggcgattctcacatggagaaccaacaatcagaaagttgg
attcatgatcgtgatgatggagaagaggagcaggtactgcaacccaagataaaacgaaaa
aggacccttaggcttaggccgcgtccgcctgtggaaaggcgagaagagaagatatacggt
gaaacacaatctcttcaatatggagattcttcatctccctctccatttcgagcagaccat
aaatttaacaaatttaagaacgatcctgaggctaaaccgtatggagattctaattctttg
aagcgtgaacaaagtgaatcatcttcaaaaactcggcgtaatttgtctactagaaggatg
gctcctacatcaaagttgcactcttctcctaaatctagcagattgaattctttgactgga
tccgcagaagatgctgttgaacactcgagagaaagctgggacggtaaaccattgactgca
ggtggaagttcagcttttggttctaagatgcctgacataatccagagaaggtgcaagaat
gttattagcaagcttcagagtagaatagacaaagaagggcatcgaattgtgccgttgtta
acagatttgtggaaacggatcgagaactctagtttaccaagtggagttagtaataatatt
ttggatcttcggaagattgatcaacgtgtcgacagattagagtacaatggagtaatggaa
ttggtgtttgatgttcagtttatgttgaagggtgctatgcagtttcatgggttctcatat
gaggtaagattggaggccaaaaaagtacatgacctcttctttgatattctgaagattgca
tttccagacactgatttccgagaagctcggaatgctctatctttctcgagcccaggaact
tccacggctgcttctttgagggagaggcctgtaagccaaaccaaaagacagaagatgata
aaggatatggacaccaactcgggcacgtctccaaaatcactgcagcgtggacctatgtcc
ggggaagaaacgagggccaccagaggtcacttgtttacacagaaggaatcaagatttggc
agtggaagtggaagtaaggatcaatatcagatgcaagaacctccacttcttactcatcct
ggggaactagttatctgcaagaagaaaagaaaagacagggaaaaatcaatagtcaagcca
aagacaggatcgagtggcccggtatcaccaccgattgttgctcgtggcaatagaacctca
ggtccagggtcggtctcaaaagacagcaaacaatgtcaaccctctcctcattcacaagga
tggcctaaccagcctcaatcttccagcggtgggggcggacctgttagctgggcaaatccc
gtgaagagattaagaacagattcgggaaagaggaggcccagccatatctga
DBGET
integrated database retrieval system