Cucurbita maxima (winter squash): 111481466
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Entry
111481466 CDS
T05246
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111481466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmax03041
]
111481466
03009 Ribosome biogenesis [BR:
cmax03009
]
111481466
Enzymes [BR:
cmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111481466
Spliceosome [BR:
cmax03041
]
Complex A
U1 snRNP components
U1 related factors
111481466
Complex B
111481466
Ribosome biogenesis [BR:
cmax03009
]
Eukaryotic type
Pre-60S particles
Helicases
111481466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
111481466
NCBI-ProteinID:
XP_022982654
UniProt:
A0A6J1J570
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MAATATAVSVGPRYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVAAAPLNSS
IVSISSSVQVQKPSSGHSYGNNLSENNDKYGRVSHGAPKHEVARGETFQSHDTLNGISST
GHGGASLKGHRPSDAGSCLSAESYRQRHEITFSGDNVPPPFSSFEATGFPPEILREVHNA
GFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRCDPKLGPTVLVL
SPTRELATQIQDEAVKFGKSSRISCACLYGGAPKGPQLRDIDRGVDIVVATPGRLNDILE
MRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIASDL
LVNPIQVNIGNVDELVANKSITQHIEALAPLEKHRRLEQILRSQEPGSKVIIFCSTKKMC
DQLARNLTRQFGAAAIHGDKSQGERDHVLGQFRTGRTPVLVATDVAARGLDIKDIRVVIN
YDFPSGVEDYVHRIGRTGRAGATGIAYTFFGEQDAKYASDLIKILEGANQRVPPELRDMA
SRSYGMAKFRRWGSGSDGRDGGRGGRNDSNSGGRGGLGMSSFSSAKPERGGGRGYDFDSR
ERYDSGYNCGRSRSPPRGVGGDRTKSWNCDHSPPVSHERSPVRSFHQAMMERSNIPPRGN
ENASKNGSGSWNQGRSRSRSRSRSPNRFNRAPAVRERSPVLSFHKAMLEKGNSGGTHVNP
DKVSRKSPSDRTDGGEHEKRSRPSHPQEEVEEGMIPQDDQSKGAADR
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcggctactgctactgctgtatctgttggcccacgatatgcaccagaggatccaacc
cttcccaaaccatggagaggtttagttgatggaaaaacagggtatctttacttttggaat
ccagaaactaatgtcacccaatacgagagacctgtagctgctgctcctcttaattcatca
atagtgtccataagttcttcagttcaagttcaaaagccatcttcaggccactcttatggc
aacaatttgagtgaaaataacgataagtatggaagagtttcccatggggcacccaaacat
gaggttgcaaggggtgaaacctttcagtcacatgataccttaaatggaatatctagtact
ggacatggaggagcatcgttgaaaggacatagaccgtcagatgctggaagttgtttatct
gcagagtcttatcgacagcgacatgaaataactttttcgggagataatgtgccgccacca
ttttcatcatttgaagccactggtttcccacctgagattcttagggaggtacataatgca
gggttctctgctccaactccaattcaggcgcaatcatggccaattgctcttcaaagtaga
gatattgtagctattgctaaaacaggctcaggcaaaactcttgggtacttaatacctggt
tttattcatctcaagcgcattcgatgtgatcctaagctaggccctactgttttggtgctg
tcaccgacaagggaattggcgacacagattcaagatgaagccgtgaagtttgggaaatcg
tcaagaatctcttgtgcgtgtctatatggaggagcaccaaagggtccacaattgagggat
atagaccgtggagtagatattgtagttgcaactcctggtcgtttgaatgatattctcgag
atgaggagaatcagtctacatcaggtttcatatcttgtactagatgaggctgatcggatg
ctggacatgggttttgaaccccagattagaaagattgtaaaagaggtgcctgctcgacgg
cagaccttaatgtacacagctacttggcccaaagaagttcgcaaaattgcatcagatctg
cttgttaatcctattcaagtcaatattggcaatgttgatgagcttgtcgcgaacaagtcc
atcactcagcatattgaagccttagcaccactggagaagcatagacgattggagcagata
ttgagatctcaagaaccaggatcaaaagtcataattttctgttctacaaagaaaatgtgt
gatcagcttgctcgcaatcttacacgccaatttggagctgctgcaattcatggagacaaa
tcccagggtgagagagatcatgttcttggccaatttcgcaccggtaggactcctgtgctt
gtagctactgatgttgcagctcgaggattggatattaaagacatcagggttgttatcaac
tatgatttcccatccggagtggaggattatgtccataggattggtcgaactggaagagca
ggagctactggtattgcttacacattctttggtgagcaggacgccaagtatgcttctgat
ctaataaaaattttggagggagctaaccagcgagtcccaccagaacttcgtgatatggct
tctcgaagctatggaatggccaagttcaggcgttggggttctggctctgatggtcgcgac
gggggtcggggtgggcgcaatgattcaaattctggtggtaggggtggactgggaatgtct
tccttttcttctgccaagccagaacgaggtggtggccgtggatatgactttgactcacga
gagaggtatgattctggatacaactgcggtcgcagtcggagtcccccaaggggtgtggga
ggtgaccgaactaaaagttggaactgcgatcacagcccacccgtttcacatgaacgctct
ccagtacggagttttcatcaagcaatgatggagcgtagcaacattcctccacggggaaat
gaaaatgctagtaagaatggttcaggaagctggaaccaaggccgaagtcgtagccgtagt
agaagccgaagtccaaaccgttttaaccgggctcctgcagtacgagaacgttctccagtt
ttgagttttcacaaagcaatgttggagaagggaaactctggaggcacacatgtgaaccca
gataaggtttcgagaaaatcacccagcgataggacggacggtggagaacatgaaaagaga
tctcgcccctcgcatcctcaagaagaggtcgaggaaggcatgatcccacaagatgaccaa
agtaagggagcagcagacagataa
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integrated database retrieval system
